FFCP PHASE1:Hg19::chr7:4573373..4573383,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C52|description=CAGE_peak_at_chr7:4573373..4573383,+|id=chr7:4573373..4573383,+|ontology_enrichment_celltype=CL:0002322!5.05e-17!5;CL:0000039!9.56e-08!7;CL:0000586!9.56e-08!7|ontology_enrichment_celltype_v019=CL:1000415;3.82e-08;2!CL:0000054;7.03e-08;2!CL:0000137;7.03e-08;2!CL:0000092;7.03e-08;2|ontology_enrichment_celltype_v019_2=CL:1000415,3.82e-08,2;CL:0000054,8.04e-08,2;CL:0000137,8.04e-08,2;CL:0000092,8.04e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!6.96e-11!8;DOID:1909!1.53e-08!2|ontology_enrichment_disease_v019=DOID:1909;1.95e-27;2!DOID:1036;2.31e-15;8!DOID:0060085;1.84e-14;1!DOID:0050619;1.84e-14;1!DOID:3165;1.84e-14;1!DOID:0060121;1.84e-14;1!DOID:2438;1.84e-14;1!DOID:4418;1.84e-14;1!DOID:1357;1.84e-14;1!DOID:200;7.03e-08;2!DOID:4305;7.03e-08;2|ontology_enrichment_disease_v019_2=DOID:1909,1.83e-27,2;DOID:1036,2.55e-15,8;DOID:0050619,1.07e-14,1;DOID:1357,1.07e-14,1;DOID:0060085,2.41e-14,1;DOID:3165,2.41e-14,1;DOID:0060121,2.41e-14,1;DOID:2438,2.41e-14,1;DOID:4418,2.41e-14,1;DOID:200,8.04e-08,2;DOID:4305,8.04e-08,2|ontology_enrichment_uberon=UBERON:0000473!2.66e-07!8|ontology_enrichment_uberon_v019=UBERON:0001764;1.84e-14;1!UBERON:0001825;1.84e-14;1!UBERON:0000473;1.31e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.07e-14,1;UBERON:0001825,1.07e-14,1;UBERON:0000473,1.27e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5803441694887,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,1.1279783030859,1.56850027454192,1.34257269580674,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,1.19228767021794,0,0,6.09207033911656,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,3.85261111168427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0,0,1.36484205787483,2.85465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62216589314576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0,1.51557396436479,5.35928260312357,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:4573373..4573383,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr7:4573373..4573383,+ | |||
|id=chr7:4573373..4573383,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.05e-17!5;CL:0000039!9.56e-08!7;CL:0000586!9.56e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:1000415;3.82e-08;2!CL:0000054;7.03e-08;2!CL:0000137;7.03e-08;2!CL:0000092;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.82e-08,2;CL:0000054,8.04e-08,2;CL:0000137,8.04e-08,2;CL:0000092,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!6.96e-11!8;DOID:1909!1.53e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.95e-27;2!DOID:1036;2.31e-15;8!DOID:0060085;1.84e-14;1!DOID:0050619;1.84e-14;1!DOID:3165;1.84e-14;1!DOID:0060121;1.84e-14;1!DOID:2438;1.84e-14;1!DOID:4418;1.84e-14;1!DOID:1357;1.84e-14;1!DOID:200;7.03e-08;2!DOID:4305;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.83e-27,2;DOID:1036,2.55e-15,8;DOID:0050619,1.07e-14,1;DOID:1357,1.07e-14,1;DOID:0060085,2.41e-14,1;DOID:3165,2.41e-14,1;DOID:0060121,2.41e-14,1;DOID:2438,2.41e-14,1;DOID:4418,2.41e-14,1;DOID:200,8.04e-08,2;DOID:4305,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.66e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.84e-14;1!UBERON:0001825;1.84e-14;1!UBERON:0000473;1.31e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.07e-14,1;UBERON:0001825,1.07e-14,1;UBERON:0000473,1.27e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5803441694887,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,1.1279783030859,1.56850027454192,1.34257269580674,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,1.19228767021794,0,0,6.09207033911656,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,3.85261111168427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0,0,1.36484205787483,2.85465333544967,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62216589314576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.18378979906969,0,1.51557396436479,5.35928260312357,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:4573373..4573383,+ | |||
}} |
Revision as of 01:24, 14 September 2013
Short description: | p@chr7:4573373..4573383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:4573373..4573383, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.82e-08 | 2 |
bone matrix secreting cell | 8.04e-08 | 2 |
osteocyte | 8.04e-08 | 2 |
osteoclast | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.07e-14 | 1 |
paranasal sinus | 1.07e-14 | 1 |
testis | 1.27e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.83e-27 | 2 |
chronic leukemia | 2.55e-15 | 8 |
paranasal sinus cancer | 1.07e-14 | 1 |
maxillary sinus cancer | 1.07e-14 | 1 |
organ system benign neoplasm | 2.41e-14 | 1 |
skin benign neoplasm | 2.41e-14 | 1 |
integumentary system benign neoplasm | 2.41e-14 | 1 |
dermis tumor | 2.41e-14 | 1 |
cutaneous fibrous histiocytoma | 2.41e-14 | 1 |
giant cell tumor | 8.04e-08 | 2 |
bone giant cell tumor | 8.04e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.