FFCP PHASE1:Mm9::chr3:107895769..107895776,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14686|HGNC=|MCL_coexpression_id=2273|UniProt=A2AE31|association_with_transcript=-21bp_to_ENSMUST00000145101_5end|description=CAGE_peak_4_at_Gnat2_5end|id=chr3:107895769..107895776,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!2.31e-28!7;UBERON:0006858!2.31e-28!7;UBERON:0000970!8.59e-21!9;UBERON:0000019!8.59e-21!9;UBERON:0000047!8.59e-21!9;UBERON:0004088!8.59e-21!9;UBERON:0002104!8.59e-21!9;UBERON:0001456!8.59e-21!9;UBERON:0003072!8.59e-21!9;UBERON:0003071!8.59e-21!9;UBERON:0004128!8.59e-21!9;UBERON:0002342!1.30e-19!10;UBERON:0005062!1.30e-19!10;UBERON:0001444!7.17e-17!11;UBERON:0000020!2.13e-15!12;UBERON:0001032!2.13e-15!12;UBERON:0004456!2.13e-15!12;UBERON:0005085!3.75e-14!13;UBERON:0003064!9.09e-14!14;UBERON:0002346!2.75e-13!71;UBERON:0003075!2.75e-13!71;UBERON:0007284!2.75e-13!71;UBERON:0004121!1.74e-09!102;UBERON:0000924!1.74e-09!102;UBERON:0006601!1.74e-09!102|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.90e-23,7;UBERON:0006858,2.90e-23,7;UBERON:0003064,4.41e-12,14;UBERON:0000970,1.10e-08,9;UBERON:0000019,1.10e-08,9;UBERON:0000047,1.10e-08,9;UBERON:0010312,1.10e-08,9;UBERON:0004088,1.10e-08,9;UBERON:0002104,1.10e-08,9;UBERON:0001456,1.10e-08,9;UBERON:0003072,1.10e-08,9;UBERON:0004128,1.10e-08,9;UBERON:0003071,1.10e-08,9;UBERON:0001444,2.79e-07,11;UBERON:0000020,9.43e-07,12;UBERON:0001032,9.43e-07,12;UBERON:0004456,9.43e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56261133755579,0.520455980298408,1.82679286987285,0.461230994512117,1.3565037649736,0.352766121407114,0.628332956648377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,1.26265113531884,0,0,0.540186389416048,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Gnat2}} | ||
|EntrezGene=14686 | |||
|HGNC= | |||
|MCL_coexpression_id=2273 | |||
|UniProt=A2AE31 | |||
|association_with_transcript=-21bp_to_ENSMUST00000145101_5end | |||
|description=CAGE_peak_4_at_Gnat2_5end | |||
|id=chr3:107895769..107895776,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!2.31e-28!7;UBERON:0006858!2.31e-28!7;UBERON:0000970!8.59e-21!9;UBERON:0000019!8.59e-21!9;UBERON:0000047!8.59e-21!9;UBERON:0004088!8.59e-21!9;UBERON:0002104!8.59e-21!9;UBERON:0001456!8.59e-21!9;UBERON:0003072!8.59e-21!9;UBERON:0003071!8.59e-21!9;UBERON:0004128!8.59e-21!9;UBERON:0002342!1.30e-19!10;UBERON:0005062!1.30e-19!10;UBERON:0001444!7.17e-17!11;UBERON:0000020!2.13e-15!12;UBERON:0001032!2.13e-15!12;UBERON:0004456!2.13e-15!12;UBERON:0005085!3.75e-14!13;UBERON:0003064!9.09e-14!14;UBERON:0002346!2.75e-13!71;UBERON:0003075!2.75e-13!71;UBERON:0007284!2.75e-13!71;UBERON:0004121!1.74e-09!102;UBERON:0000924!1.74e-09!102;UBERON:0006601!1.74e-09!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,2.90e-23,7;UBERON:0006858,2.90e-23,7;UBERON:0003064,4.41e-12,14;UBERON:0000970,1.10e-08,9;UBERON:0000019,1.10e-08,9;UBERON:0000047,1.10e-08,9;UBERON:0010312,1.10e-08,9;UBERON:0004088,1.10e-08,9;UBERON:0002104,1.10e-08,9;UBERON:0001456,1.10e-08,9;UBERON:0003072,1.10e-08,9;UBERON:0004128,1.10e-08,9;UBERON:0003071,1.10e-08,9;UBERON:0001444,2.79e-07,11;UBERON:0000020,9.43e-07,12;UBERON:0001032,9.43e-07,12;UBERON:0004456,9.43e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56261133755579,0.520455980298408,1.82679286987285,0.461230994512117,1.3565037649736,0.352766121407114,0.628332956648377,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,1.26265113531884,0,0,0.540186389416048,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Gnat2 | |||
}} |
Revision as of 01:13, 14 September 2013
Short description: | p4@Gnat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gnat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2273 |
Association with transcript: | -21bp_to_ENSMUST00000145101_5end |
EntrezGene: | Gnat2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 2.90e-23 | 7 |
adrenal/interrenal gland | 2.90e-23 | 7 |
intermediate mesoderm | 4.41e-12 | 14 |
eye | 1.10e-08 | 9 |
camera-type eye | 1.10e-08 | 9 |
simple eye | 1.10e-08 | 9 |
immature eye | 1.10e-08 | 9 |
ocular region | 1.10e-08 | 9 |
visual system | 1.10e-08 | 9 |
face | 1.10e-08 | 9 |
optic cup | 1.10e-08 | 9 |
optic vesicle | 1.10e-08 | 9 |
eye primordium | 1.10e-08 | 9 |
subdivision of head | 2.79e-07 | 11 |
sense organ | 9.43e-07 | 12 |
sensory system | 9.43e-07 | 12 |
entire sense organ system | 9.43e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.