FFCP PHASE1:Mm9::chr2:98506437..98506455,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=80|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:98506437..98506455,+|id=chr2:98506437..98506455,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.88e-12,6;CL:0000556,1.88e-12,6;CL:0000050,5.19e-08,9;CL:0002027,2.02e-07,3;CL:0002006,2.02e-07,3;CL:0002024,2.02e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.24e-08!10;UBERON:0000411!2.24e-08!10;UBERON:0001950!2.24e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.59e-19,10;UBERON:0000411,1.59e-19,10;UBERON:0001950,1.59e-19,10;UBERON:0002619,1.52e-10,17;UBERON:0000956,4.05e-08,21;UBERON:0001869,4.05e-08,21;UBERON:0000203,4.05e-08,21|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,2.80877431586392,1.71217968225505,1.19658238493005,0.171200729931206,0.34968160967599,3.99731714178795,22.069804145491,4.89693314689703,1.26184866143295,3.70208970735495,4.66828616977833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,1.0470474879476,0.588231488031014,0.683045484958446,2.91306211818692,0.629484089877886,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,2.0057340795713,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0,0,0,0.757261933331841,0,5.50742528533188,0,0,0,0.649776417447669,4.92829575807069,0,2.21559419351475,1.55871602761721,2.12003744706204,0,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.289198713839823,0,1.45590164952668,2.42925670306433,125.097815308887,0,1.17112318804619,0,1.27728527604296,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.407357455401265,0,0,1.26265113531884,0.130120442962704,0,0,0.90422890701429,0.340182495756639,1.40925092313335,0.562210347358373,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0.278047249225598,1.39300866608867,0.205782136407943,0,0,0.257347907114715,0,0,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.465067889500816,0,1.98501082024188,0.16455984991348,0.985004784474571,0.162137619091711,0,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.581857461502877,0.561086559122548,0.126473074248515,0,0.31399745568275,0,0,0,0,0.674586337154561,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0,0,0.163934945376675,0.252470927204373,0.631016438832513,0,2.58508077279359,0,0.668396022247182,0.849229592366497,2.02405350837447,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.238744688006273,0,0.874442509889552,0,0,0.206386867963223,0.740778109478847,0,0.820165366326151,0,0.339956859987711,0,0.138199973804424,26.7307773044232,0.316335993581135,0,0,1.46361807210128,0,0.539457385539283,0.165306911450672,0,0,3.72803587852155,1.12738587736838,0,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0.576060012515731,0.316011120628178,0.202725215290164,0,0,0.537080087002444,0.596044064343795,0,0,0,0.228620419965,0,0.487289403698762,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0,0.73260649706906,0.214368379079066,0,9.03602948187307,6.90487854760765,9.73922372846974,5.499301834998,2.05524755931193,1.5107877947794,3.37511250115903,4.95353323546643,3.17199686288943,1.03552062350364,0.415149390336707,1.19707462020309,0,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,1.03017528619447,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.347652977834566,0,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0.548783918618318,0,0.543216455383447,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,1.14772999241306,0,0.463735671240843|short_description=p@chr2:98506437..98506455,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=80 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:98506437..98506455,+ | |||
|id=chr2:98506437..98506455,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.88e-12,6;CL:0000556,1.88e-12,6;CL:0000050,5.19e-08,9;CL:0002027,2.02e-07,3;CL:0002006,2.02e-07,3;CL:0002024,2.02e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.24e-08!10;UBERON:0000411!2.24e-08!10;UBERON:0001950!2.24e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.59e-19,10;UBERON:0000411,1.59e-19,10;UBERON:0001950,1.59e-19,10;UBERON:0002619,1.52e-10,17;UBERON:0000956,4.05e-08,21;UBERON:0001869,4.05e-08,21;UBERON:0000203,4.05e-08,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,2.80877431586392,1.71217968225505,1.19658238493005,0.171200729931206,0.34968160967599,3.99731714178795,22.069804145491,4.89693314689703,1.26184866143295,3.70208970735495,4.66828616977833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,1.0470474879476,0.588231488031014,0.683045484958446,2.91306211818692,0.629484089877886,0.202753862439029,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0.514518872071894,2.0057340795713,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45839474333043,0,0,0,0.757261933331841,0,5.50742528533188,0,0,0,0.649776417447669,4.92829575807069,0,2.21559419351475,1.55871602761721,2.12003744706204,0,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.289198713839823,0,1.45590164952668,2.42925670306433,125.097815308887,0,1.17112318804619,0,1.27728527604296,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0.407357455401265,0,0,1.26265113531884,0.130120442962704,0,0,0.90422890701429,0.340182495756639,1.40925092313335,0.562210347358373,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0.278047249225598,1.39300866608867,0.205782136407943,0,0,0.257347907114715,0,0,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.465067889500816,0,1.98501082024188,0.16455984991348,0.985004784474571,0.162137619091711,0,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0.581857461502877,0.561086559122548,0.126473074248515,0,0.31399745568275,0,0,0,0,0.674586337154561,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0,0,0.163934945376675,0.252470927204373,0.631016438832513,0,2.58508077279359,0,0.668396022247182,0.849229592366497,2.02405350837447,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.238744688006273,0,0.874442509889552,0,0,0.206386867963223,0.740778109478847,0,0.820165366326151,0,0.339956859987711,0,0.138199973804424,26.7307773044232,0.316335993581135,0,0,1.46361807210128,0,0.539457385539283,0.165306911450672,0,0,3.72803587852155,1.12738587736838,0,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0.576060012515731,0.316011120628178,0.202725215290164,0,0,0.537080087002444,0.596044064343795,0,0,0,0.228620419965,0,0.487289403698762,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0,0.73260649706906,0.214368379079066,0,9.03602948187307,6.90487854760765,9.73922372846974,5.499301834998,2.05524755931193,1.5107877947794,3.37511250115903,4.95353323546643,3.17199686288943,1.03552062350364,0.415149390336707,1.19707462020309,0,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,1.03017528619447,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.256100609619477,0.0574354689556133,0,0.347652977834566,0,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0.548783918618318,0,0.543216455383447,0.561142271657738,0.118635018124174,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,1.14772999241306,0,0.463735671240843 | |||
|short_description=p@chr2:98506437..98506455,+ | |||
}} |
Revision as of 00:58, 14 September 2013
Short description: | p@chr2:98506437..98506455, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:98506437..98506455, + |
Coexpression cluster: | MCL_coexpression_mm9:80 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.88e-12 | 6 |
megakaryocyte | 1.88e-12 | 6 |
megakaryocyte-erythroid progenitor cell | 5.19e-08 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 2.02e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.02e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.59e-19 | 10 |
visual cortex | 1.59e-19 | 10 |
neocortex | 1.59e-19 | 10 |
regional part of cerebral cortex | 1.52e-10 | 17 |
cerebral cortex | 4.05e-08 | 21 |
cerebral hemisphere | 4.05e-08 | 21 |
pallium | 4.05e-08 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.