FFCP PHASE1:Mm9::chr2:84490836..84490844,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12388|HGNC=|MCL_coexpression_id=52|UniProt=P30999|association_with_transcript=-3bp_to_ENSMUST00000067232_5end|description=CAGE_peak_4_at_Ctnnd1_5end|id=chr2:84490836..84490844,-|ontology_enrichment_celltype=CL:0000066!4.82e-09!25;CL:0002076!1.34e-07!15;CL:0000223!3.89e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,4.44e-09,25;CL:0002076,1.25e-07,15;CL:0000223,3.65e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.33e-09!15;UBERON:0001242!6.61e-08!13;UBERON:0000060!6.61e-08!13;UBERON:0001262!6.61e-08!13;UBERON:0004786!6.61e-08!13;UBERON:0000160!7.02e-08!43;UBERON:0005409!7.70e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.32e-09,31;UBERON:0000344,5.84e-09,15;UBERON:0001242,6.16e-08,13;UBERON:0001262,6.16e-08,13;UBERON:0004786,6.16e-08,13;UBERON:0005409,1.50e-07,47|phase1_expression=4.32401887182944,41.8770489167233,29.5749505603198,22.0798874253986,33.0591181764589,11.2479112180966,12.1478573109673,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0.699561878128147,0,0,0,4.33720779770456,0,0,8.79958325363737,6.42345986988076,29.860062133981,20.6765758156356,18.7459972436723,12.3515222646643,10.5852654499171,10.6430645114546,0,1.23012957516914,0,3.75507105676657,2.99222361645286,5.9209113316087,0,0.7813353445238,0.523523743973798,0,0,0,1.25896817975577,2.33166941804883,4.58866880404204,3.12956537739216,3.48840250208714,4.83309602015838,3.11087838518853,4.05960622713551,4.31257693094915,0,0,0,6.17422646486273,6.01720223871389,6.70373719960675,2.83243045203437,0,3.80298842103708,3.38844532069132,1.77858959222228,0.899899717281399,0,1.4209602298922,1.79760066311043,2.68952813725088,2.69592992002042,3.24014251996058,4.20649922702764,4.28476476605705,5.07997644188711,2.32732518508413,3.73797336971122,0,2.20231761998777,4.34136949489638,1.99688493233117,1.58263545276233,2.65314166446988,4.68822033501084,1.3959149950069,0.56276261003168,2.13917546887534,1.47314292736834,5.83723891276322,4.84638559145781,6.51245262665383,4.76100828672749,10.4351215932604,2.58127163094416,1.3599426674155,5.93673510801599,2.59910566979068,2.68816132258401,1.26399978118577,4.77204903218562,4.93593408745451,4.94675404314476,2.95771181531029,24.3820307087204,61.153257529595,135.102673599133,2.38140145112336,4.30711771307668,6.57181778519218,9.47726201668198,0,2.82040064223167,1.90833859442749,0.913396434936424,2.30615497256059,1.50722640552623,3.52766121407114,4.90099706185734,4.6967043869531,2.02439099687876,0.884610551949874,2.10296904931632,3.75430581382669,2.42437626567611,1.86391761218122,0.292780797011547,2.93225389538837,8.17462576667492,1.07833612055328,0.599902730993408,1.52484272487678,0.449371918214468,0.915001205637253,3.5183218591602,1.91206752211504,1.27857728665165,1.24672826735736,1.1356888414743,4.48093200941392,2.86136032403214,4.29628689337247,2.10441855886474,0.780722657776222,1.14951052216736,1.98068342785884,2.86339153887859,1.42876648217788,0.640568601424249,2.06143794031403,0.776110112217047,2.58681591519411,1.89106080167819,1.58356011747554,2.41115305670332,1.66828349535359,4.179025998266,2.46938563689532,2.58744546864041,0.702213187313235,1.02939162845886,1.42081749697796,3.10688658803253,2.11073453982987,3.6012412292203,3.78791576936336,2.75469924446365,3.5481435964097,2.09280550275367,4.02410102099429,4.2035523252181,3.94943639792353,4.92502392237286,3.72916523910936,3.80119967305864,2.85415149878366,3.89198614405078,0.630869845692382,1.85228302282712,12.8863325363681,8.19796756656987,0.639864751605702,2.78684006232526,3.35055399437443,3.42861991859682,4.44756087689741,1.71203063501303,9.96511029243474,4.28217282282428,4.77536896720512,3.18330355265841,3.70431765526328,7.19055526923377,8.21324589523838,6.37252074413975,1.32767530667157,3.08470984046268,2.25415471346161,1.62921062276251,2.52138233317913,4.48869247298039,3.92066530170395,6.9376769550413,3.92496819603437,4.31890073726302,2.66807364378434,1.83529616287703,1.37591296579242,1.34917267430912,1.62288097110802,2.894125917029,1.01850340712568,3.16465751195892,4.21551589615092,3.84385978463314,11.5014565221884,5.95425516269605,3.74445207737473,2.52578877947112,5.74071723270119,4.82443521363367,3.32555742299888,1.70542270593436,3.58522948172457,2.8856664581782,2.34690248288502,2.68010011906905,2.85652369063216,11.1226179278945,1.7339865851681,5.75808193086815,5.58091690301205,6.71839590334526,8.46156411142888,9.9807850421243,4.52373851817817,2.71952841909355,0.983528546038072,1.65562047782839,1.12385412991454,1.99259867206745,1.47541450839008,3.53459298086122,2.52406575533005,0.780877488593277,2.58508077279359,1.43381278771531,2.45078541490634,3.11384183867716,1.61924280669958,1.46127928955656,1.18586333383957,1.60660658210904,1.41940085208269,2.13678724400706,3.58351310577867,4.12425307431339,2.65490276679926,1.69946445308487,2.41858845571801,1.69744571780308,1.47650946440386,2.45948118355142,3.87642439752332,3.27180356529755,4.63446591900138,2.84433082142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| ||
|EntrezGene=12388 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=P30999 | |||
|association_with_transcript=-3bp_to_ENSMUST00000067232_5end | |||
|description=CAGE_peak_4_at_Ctnnd1_5end | |||
|id=chr2:84490836..84490844,- | |||
|ontology_enrichment_celltype=CL:0000066!4.82e-09!25;CL:0002076!1.34e-07!15;CL:0000223!3.89e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.44e-09,25;CL:0002076,1.25e-07,15;CL:0000223,3.65e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.33e-09!15;UBERON:0001242!6.61e-08!13;UBERON:0000060!6.61e-08!13;UBERON:0001262!6.61e-08!13;UBERON:0004786!6.61e-08!13;UBERON:0000160!7.02e-08!43;UBERON:0005409!7.70e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.32e-09,31;UBERON:0000344,5.84e-09,15;UBERON:0001242,6.16e-08,13;UBERON:0001262,6.16e-08,13;UBERON:0004786,6.16e-08,13;UBERON:0005409,1.50e-07,47 | |||
|phase1_expression=4.32401887182944,41.8770489167233,29.5749505603198,22.0798874253986,33.0591181764589,11.2479112180966,12.1478573109673,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0.699561878128147,0,0,0,4.33720779770456,0,0,8.79958325363737,6.42345986988076,29.860062133981,20.6765758156356,18.7459972436723,12.3515222646643,10.5852654499171,10.6430645114546,0,1.23012957516914,0,3.75507105676657,2.99222361645286,5.9209113316087,0,0.7813353445238,0.523523743973798,0,0,0,1.25896817975577,2.33166941804883,4.58866880404204,3.12956537739216,3.48840250208714,4.83309602015838,3.11087838518853,4.05960622713551,4.31257693094915,0,0,0,6.17422646486273,6.01720223871389,6.70373719960675,2.83243045203437,0,3.80298842103708,3.38844532069132,1.77858959222228,0.899899717281399,0,1.4209602298922,1.79760066311043,2.68952813725088,2.69592992002042,3.24014251996058,4.20649922702764,4.28476476605705,5.07997644188711,2.32732518508413,3.73797336971122,0,2.20231761998777,4.34136949489638,1.99688493233117,1.58263545276233,2.65314166446988,4.68822033501084,1.3959149950069,0.56276261003168,2.13917546887534,1.47314292736834,5.83723891276322,4.84638559145781,6.51245262665383,4.76100828672749,10.4351215932604,2.58127163094416,1.3599426674155,5.93673510801599,2.59910566979068,2.68816132258401,1.26399978118577,4.77204903218562,4.93593408745451,4.94675404314476,2.95771181531029,24.3820307087204,61.153257529595,135.102673599133,2.38140145112336,4.30711771307668,6.57181778519218,9.47726201668198,0,2.82040064223167,1.90833859442749,0.913396434936424,2.30615497256059,1.50722640552623,3.52766121407114,4.90099706185734,4.6967043869531,2.02439099687876,0.884610551949874,2.10296904931632,3.75430581382669,2.42437626567611,1.86391761218122,0.292780797011547,2.93225389538837,8.17462576667492,1.07833612055328,0.599902730993408,1.52484272487678,0.449371918214468,0.915001205637253,3.5183218591602,1.91206752211504,1.27857728665165,1.24672826735736,1.1356888414743,4.48093200941392,2.86136032403214,4.29628689337247,2.10441855886474,0.780722657776222,1.14951052216736,1.98068342785884,2.86339153887859,1.42876648217788,0.640568601424249,2.06143794031403,0.776110112217047,2.58681591519411,1.89106080167819,1.58356011747554,2.41115305670332,1.66828349535359,4.179025998266,2.46938563689532,2.58744546864041,0.702213187313235,1.02939162845886,1.42081749697796,3.10688658803253,2.11073453982987,3.6012412292203,3.78791576936336,2.75469924446365,3.5481435964097,2.09280550275367,4.02410102099429,4.2035523252181,3.94943639792353,4.92502392237286,3.72916523910936,3.80119967305864,2.85415149878366,3.89198614405078,0.630869845692382,1.85228302282712,12.8863325363681,8.19796756656987,0.639864751605702,2.78684006232526,3.35055399437443,3.42861991859682,4.44756087689741,1.71203063501303,9.96511029243474,4.28217282282428,4.77536896720512,3.18330355265841,3.70431765526328,7.19055526923377,8.21324589523838,6.37252074413975,1.32767530667157,3.08470984046268,2.25415471346161,1.62921062276251,2.52138233317913,4.48869247298039,3.92066530170395,6.9376769550413,3.92496819603437,4.31890073726302,2.66807364378434,1.83529616287703,1.37591296579242,1.34917267430912,1.62288097110802,2.894125917029,1.01850340712568,3.16465751195892,4.21551589615092,3.84385978463314,11.5014565221884,5.95425516269605,3.74445207737473,2.52578877947112,5.74071723270119,4.82443521363367,3.32555742299888,1.70542270593436,3.58522948172457,2.8856664581782,2.34690248288502,2.68010011906905,2.85652369063216,11.1226179278945,1.7339865851681,5.75808193086815,5.58091690301205,6.71839590334526,8.46156411142888,9.9807850421243,4.52373851817817,2.71952841909355,0.983528546038072,1.65562047782839,1.12385412991454,1.99259867206745,1.47541450839008,3.53459298086122,2.52406575533005,0.780877488593277,2.58508077279359,1.43381278771531,2.45078541490634,3.11384183867716,1.61924280669958,1.46127928955656,1.18586333383957,1.60660658210904,1.41940085208269,2.13678724400706,3.58351310577867,4.12425307431339,2.65490276679926,1.69946445308487,2.41858845571801,1.69744571780308,1.47650946440386,2.45948118355142,3.87642439752332,3.27180356529755,4.63446591900138,2.84433082142234,3.16255825724996,3.09406629744561,1.36175842301515,1.44048875225048,1.29358683782755,0.428674070063185,1.95074257006501,1.24858172321449,1.64549020602121,3.04464949114599,2.3467170806371,2.75381692122966,3.08739757276947,7.74965388824956,2.26050197374268,5.24722446874956,4.05865969610664,2.9545361954111,9.03590593552537,0.741701208042039,0.170870880797853,2.88941615148511,1.85194527369712,0.376736914009382,0.546776910884101,0.915112692826091,2.54967644990783,1.6794174278839,1.65839968565309,4.77335309007557,2.53068794864908,2.23651413839534,3.45617090629764,5.43629569637619,2.62035076495413,3.64133735239016,4.79390043206948,7.0674104335688,8.55458823725833,6.21339313086926,1.69107881605257,3.73791365109947,2.64733584731356,1.75006069509643,2.32487682259916,1.18269287843545,5.16371850041317,5.33837977860195,3.46035836604846,1.93267296660805,2.30424005006292,0.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| |||
|short_description=p4@Ctnnd1 | |||
}} | |||
Revision as of 00:46, 14 September 2013
| Short description: | p4@Ctnnd1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Ctnnd1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:52 |
| Association with transcript: | -3bp_to_ENSMUST00000067232_5end |
| EntrezGene: | Ctnnd1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 4.44e-09 | 25 |
| endo-epithelial cell | 1.25e-07 | 15 |
| endodermal cell | 3.65e-07 | 20 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.32e-09 | 31 |
| mucosa | 5.84e-09 | 15 |
| intestinal mucosa | 6.16e-08 | 13 |
| wall of intestine | 6.16e-08 | 13 |
| gastrointestinal system mucosa | 6.16e-08 | 13 |
| gastrointestinal system | 1.50e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
