Personal tools

FFCP PHASE1:Mm9::chr2:74536026..74536039,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=15438|HGNC=|MCL_coexpression_id=991|UniProt=P28357|association_with_transcript=206bp_to_NM_013555,uc008kdz.1_5end|description=CAGE_peak_1_at_Hoxd9_5end|id=chr2:74536026..74536039,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!6.45e-16!26;UBERON:0000990!6.45e-16!26;UBERON:0000489!1.75e-15!21;UBERON:0003133!5.38e-15!24;UBERON:0000991!1.07e-11!18;UBERON:0005564!1.07e-11!18;UBERON:0006554!1.32e-11!16;UBERON:0001008!1.41e-11!17;UBERON:0004176!4.77e-11!17;UBERON:0009196!4.77e-11!17;UBERON:0009117!4.77e-11!17;UBERON:0002113!5.18e-11!14;UBERON:0003918!5.18e-11!14;UBERON:0005095!5.18e-11!14;UBERON:0007687!5.18e-11!14;UBERON:0003101!7.62e-10!16;UBERON:0000079!7.62e-10!16;UBERON:0003135!1.03e-09!15;UBERON:0000473!5.50e-09!14;UBERON:0003102!2.01e-08!23;UBERON:0003100!1.32e-07!11;UBERON:0003064!1.61e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.85e-22,21;UBERON:0003133,9.99e-21,24;UBERON:0005156,1.04e-20,26;UBERON:0000990,1.04e-20,26;UBERON:0000991,4.51e-17,18;UBERON:0005564,4.51e-17,18;UBERON:0006554,9.75e-17,18;UBERON:0004176,4.20e-16,17;UBERON:0009196,4.20e-16,17;UBERON:0009117,4.20e-16,17;UBERON:0002113,1.30e-15,14;UBERON:0003918,1.30e-15,14;UBERON:0011143,1.30e-15,14;UBERON:0005095,1.30e-15,14;UBERON:0007687,1.30e-15,14;UBERON:0001008,1.55e-15,19;UBERON:0003135,4.08e-14,15;UBERON:0000473,5.00e-13,14;UBERON:0003101,6.27e-13,16;UBERON:0000079,6.27e-13,16;UBERON:0003100,2.32e-09,11;UBERON:0000474,5.14e-08,9;UBERON:0004175,5.74e-08,9;UBERON:0003102,2.44e-07,22;UBERON:0003064,3.05e-07,14;UBERON:0003103,3.23e-07,43;UBERON:0002240,3.30e-07,6;UBERON:0005174,3.30e-07,6;UBERON:0001137,3.30e-07,6;UBERON:0003886,5.83e-07,38;UBERON:0003134,6.14e-07,8;UBERON:0010707,7.99e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,9.42648248532552,7.28866185140325,0,0,0,0,0,0,0,0,0,0,0,0,7.95497180778903,4.41352210477219,10.2519695203915,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,1.37020655662872,1.55362730188303,1.92974780784272,2.4287945747259,2.13125834818499,1.61430848079241,0.753613202763113,2.23418543557839,1.63366568728578,1.23597483867187,0.433798070759735,0.884610551949874,2.26473589926373,0.662524555381181,1.93950101254089,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,8.55450656342657,4.85187185379363,9.60346482047964,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,6.46703978798527,3.9712276835242,1.05570674498369,2.6303487891309,1.11218899690239,1.39300866608867,2.26360350048738,6.56813080501028,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0.264450566663544,2.13288250535234,1.39342003116263,0.257734922644187,1.00841762311671,0.667134131534611,0.760902504450237,0,0.658795818896044,0.754005626400808,0.397912944082302,0.58489226135736,0,0.432276099749388,0.199141273254367,7.39704813717019,5.71242563048644,5.63538678365402,5.49858585182348,9.50367187121366,12.9751266797089,9.80166325425988,5.46157547524528,8.94892748695836,12.7099078839455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.289298117163023,0,0,2.95058563811422,1.65562047782839,0,0,5.24591825205361,6.31177318010932,0,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,8.65834519770439,8.19101776869374,8.30723492703238,11.0529982391599,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63212099352905,4.02480934641258,0.882113592219848,1.81374878235628,4.84393280087717,1.62844897306021,1.55184047204077,1.14898629821543,0,3.52308073819968,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.785267825952089,2.59229946583586,0,0,20.4837668080251,20.5168528166801,18.4728628926845,17.6948958164492,16.0508319216239,18.5424437060291,7.55185432094911,4.08951443260272,1.20792060413003,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.179427713218951,0,2.70465431645067,6.00583921443782,9.34073283763052,0.643105137237198,17.5550236412377,0,0,0,0,0,0,0,0,0,0,1.45302286617847,0.798049746802062,0.341467211508268,1.45864030240976,0.628839487883947,1.2869045591501,1.11123363900808,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,0.943131706930381,0.842773567228942,1.47257850531199,0.861532034334199,0.952587382566147,1.62238056322798,0.578727661391115,0.824171801606613,0.294397840268795,1.71434626192708,1.4198064492747,0.953744759789284,1.0174249164263,0.658765662907314,0.676916863133412,0.914639864363863,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,1.37906275325789,1.22769312950907,1.39443157067369,1.15743966588685,0,0.701794825336225,1.71896843238639,2.48674831689496,1.54413993383661,2.08681052058379|short_description=p1@Hoxd9}}
|EntrezGene=15438
|HGNC=
|MCL_coexpression_id=991
|UniProt=P28357
|association_with_transcript=206bp_to_NM_013555,uc008kdz.1_5end
|description=CAGE_peak_1_at_Hoxd9_5end
|id=chr2:74536026..74536039,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005156!6.45e-16!26;UBERON:0000990!6.45e-16!26;UBERON:0000489!1.75e-15!21;UBERON:0003133!5.38e-15!24;UBERON:0000991!1.07e-11!18;UBERON:0005564!1.07e-11!18;UBERON:0006554!1.32e-11!16;UBERON:0001008!1.41e-11!17;UBERON:0004176!4.77e-11!17;UBERON:0009196!4.77e-11!17;UBERON:0009117!4.77e-11!17;UBERON:0002113!5.18e-11!14;UBERON:0003918!5.18e-11!14;UBERON:0005095!5.18e-11!14;UBERON:0007687!5.18e-11!14;UBERON:0003101!7.62e-10!16;UBERON:0000079!7.62e-10!16;UBERON:0003135!1.03e-09!15;UBERON:0000473!5.50e-09!14;UBERON:0003102!2.01e-08!23;UBERON:0003100!1.32e-07!11;UBERON:0003064!1.61e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.85e-22,21;UBERON:0003133,9.99e-21,24;UBERON:0005156,1.04e-20,26;UBERON:0000990,1.04e-20,26;UBERON:0000991,4.51e-17,18;UBERON:0005564,4.51e-17,18;UBERON:0006554,9.75e-17,18;UBERON:0004176,4.20e-16,17;UBERON:0009196,4.20e-16,17;UBERON:0009117,4.20e-16,17;UBERON:0002113,1.30e-15,14;UBERON:0003918,1.30e-15,14;UBERON:0011143,1.30e-15,14;UBERON:0005095,1.30e-15,14;UBERON:0007687,1.30e-15,14;UBERON:0001008,1.55e-15,19;UBERON:0003135,4.08e-14,15;UBERON:0000473,5.00e-13,14;UBERON:0003101,6.27e-13,16;UBERON:0000079,6.27e-13,16;UBERON:0003100,2.32e-09,11;UBERON:0000474,5.14e-08,9;UBERON:0004175,5.74e-08,9;UBERON:0003102,2.44e-07,22;UBERON:0003064,3.05e-07,14;UBERON:0003103,3.23e-07,43;UBERON:0002240,3.30e-07,6;UBERON:0005174,3.30e-07,6;UBERON:0001137,3.30e-07,6;UBERON:0003886,5.83e-07,38;UBERON:0003134,6.14e-07,8;UBERON:0010707,7.99e-07,13
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0.7104801149461,0,0,0,0,0,9.42648248532552,7.28866185140325,0,0,0,0,0,0,0,0,0,0,0,0,7.95497180778903,4.41352210477219,10.2519695203915,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,1.37020655662872,1.55362730188303,1.92974780784272,2.4287945747259,2.13125834818499,1.61430848079241,0.753613202763113,2.23418543557839,1.63366568728578,1.23597483867187,0.433798070759735,0.884610551949874,2.26473589926373,0.662524555381181,1.93950101254089,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,8.55450656342657,4.85187185379363,9.60346482047964,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,6.46703978798527,3.9712276835242,1.05570674498369,2.6303487891309,1.11218899690239,1.39300866608867,2.26360350048738,6.56813080501028,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0.233530684734339,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0,0,0,0.264450566663544,2.13288250535234,1.39342003116263,0.257734922644187,1.00841762311671,0.667134131534611,0.760902504450237,0,0.658795818896044,0.754005626400808,0.397912944082302,0.58489226135736,0,0.432276099749388,0.199141273254367,7.39704813717019,5.71242563048644,5.63538678365402,5.49858585182348,9.50367187121366,12.9751266797089,9.80166325425988,5.46157547524528,8.94892748695836,12.7099078839455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.289298117163023,0,0,2.95058563811422,1.65562047782839,0,0,5.24591825205361,6.31177318010932,0,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,8.65834519770439,8.19101776869374,8.30723492703238,11.0529982391599,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63212099352905,4.02480934641258,0.882113592219848,1.81374878235628,4.84393280087717,1.62844897306021,1.55184047204077,1.14898629821543,0,3.52308073819968,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0.785267825952089,2.59229946583586,0,0,20.4837668080251,20.5168528166801,18.4728628926845,17.6948958164492,16.0508319216239,18.5424437060291,7.55185432094911,4.08951443260272,1.20792060413003,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.179427713218951,0,2.70465431645067,6.00583921443782,9.34073283763052,0.643105137237198,17.5550236412377,0,0,0,0,0,0,0,0,0,0,1.45302286617847,0.798049746802062,0.341467211508268,1.45864030240976,0.628839487883947,1.2869045591501,1.11123363900808,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,0.943131706930381,0.842773567228942,1.47257850531199,0.861532034334199,0.952587382566147,1.62238056322798,0.578727661391115,0.824171801606613,0.294397840268795,1.71434626192708,1.4198064492747,0.953744759789284,1.0174249164263,0.658765662907314,0.676916863133412,0.914639864363863,0.789209134313529,0.679020569229309,1.12228454331548,0.593175090620871,1.37906275325789,1.22769312950907,1.39443157067369,1.15743966588685,0,0.701794825336225,1.71896843238639,2.48674831689496,1.54413993383661,2.08681052058379
|short_description=p1@Hoxd9
}}

Revision as of 00:32, 14 September 2013

Short description:p1@Hoxd9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hoxd9_5end
Coexpression cluster:MCL_coexpression_mm9:991
Association with transcript: 206bp_to_NM_013555, uc008kdz.1_5end
EntrezGene:Hoxd9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hoxd9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C79.50
kidney, neonate N00.CNhs11214.646-21G712.98
kidney, neonate N10.CNhs11206.758-6D59.80
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F38.95
kidney, neonate N30.CNhs11203.1385-42H112.71
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H78.19
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G611.05
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I75.63
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F520.48
testis, embryo E15.CNhs11034.443-27C520.52
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I517.69
testis, embryo E18.CNhs11027.503-18G516.05
testis, neonate N00.CNhs11189.1300-22B718.54
testis, neonate N07.CNhs11222.726-26I47.55
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F56.01
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cavitated compound organ2.85e-2221
reproductive organ9.99e-2124
reproductive structure1.04e-2026
reproductive system1.04e-2026
gonad4.51e-1718
gonad primordium4.51e-1718
urinary system structure9.75e-1718
external genitalia4.20e-1617
indifferent external genitalia4.20e-1617
indifferent gonad4.20e-1617
kidney1.30e-1514
kidney mesenchyme1.30e-1514
upper urinary tract1.30e-1514
kidney rudiment1.30e-1514
kidney field1.30e-1514
renal system1.55e-1519
male reproductive organ4.08e-1415
testis5.00e-1314
male organism6.27e-1316
male reproductive system6.27e-1316
female organism2.32e-0911
female reproductive system5.14e-089
internal genitalia5.74e-089
surface structure2.44e-0722
intermediate mesoderm3.05e-0714
compound organ3.23e-0743
spinal cord3.30e-076
dorsal region element3.30e-076
dorsum3.30e-076
body cavity precursor5.83e-0738
female reproductive organ6.14e-078
appendage girdle complex7.99e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:74536026..74536039,%2B&oldid=2990009"