FFCP PHASE1:Hg19::chr7:150688166..150688189,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4846|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7876|TSSclassifier=S|UniProt=E7ESA7|association_with_transcript=-2bp_to_ENST00000461406_5end|coexpression_cluster_id=C34|description=CAGE_peak_9_at_NOS3_5end|id=chr7:150688166..150688189,+|ontology_enrichment_celltype=CL:1000415!1.29e-12!2;CL:0000313!1.44e-07!1|ontology_enrichment_celltype_v019=CL:0002178;2.89e-12;3|ontology_enrichment_celltype_v019_2=CL:0002178,2.89e-12,3|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1|ontology_enrichment_disease=DOID:305!2.66e-14!106;DOID:3493!4.97e-13!2;DOID:0050687!6.03e-11!143;DOID:0050615!4.10e-09!16;DOID:299!3.18e-08!25;DOID:1325!4.44e-08!7;DOID:3904!4.44e-08!7;DOID:2152!1.44e-07!1;DOID:0050619!3.62e-07!1;DOID:1357!3.62e-07!1;DOID:5093!5.86e-07!4;DOID:1612!5.86e-07!4|ontology_enrichment_disease_v019=DOID:3493;1.07e-17;2!DOID:4929;1.27e-17;2!DOID:3119;2.29e-10;14|ontology_enrichment_disease_v019_2=DOID:3493,1.07e-17,2;DOID:4929,1.27e-17,2;DOID:3119,2.29e-10,14|ontology_enrichment_uberon=UBERON:0002294!7.87e-14!7;UBERON:0001173!7.87e-14!7;UBERON:0004912!7.87e-14!7;UBERON:0005911!3.58e-11!82;UBERON:0000077!5.85e-11!130;UBERON:0002110!1.06e-08!3;UBERON:0006242!1.06e-08!3;UBERON:0000466!1.17e-08!126;UBERON:0009497!4.85e-08!25;UBERON:0000015!4.85e-08!25;UBERON:0002423!4.85e-08!25;UBERON:0006235!4.85e-08!25;UBERON:0004161!4.85e-08!25;UBERON:0001041!1.26e-07!98;UBERON:0004913!1.36e-07!1;UBERON:0003703!1.36e-07!1;UBERON:0001174!1.36e-07!1;UBERON:0004914!1.36e-07!1;UBERON:0004911!1.44e-07!1;UBERON:0004119!1.62e-07!169;UBERON:0000925!1.62e-07!169;UBERON:0006595!1.62e-07!169;UBERON:0002171!1.97e-07!1;UBERON:0006518!1.97e-07!1;UBERON:0008949!1.97e-07!1;UBERON:0000101!1.97e-07!1;UBERON:0002167!1.97e-07!1;UBERON:0001007!2.19e-07!155;UBERON:0001555!2.19e-07!155;UBERON:0007026!2.19e-07!155;UBERON:0009569!2.25e-07!113;UBERON:0003929!2.79e-07!54;UBERON:0001764!3.62e-07!1;UBERON:0001825!3.62e-07!1;UBERON:0004921!3.64e-07!129;UBERON:0004185!3.64e-07!129;UBERON:0002394!5.05e-07!4;UBERON:0003928!5.05e-07!4;UBERON:0005153!5.24e-07!37;UBERON:0004807!5.66e-07!28|ontology_enrichment_uberon_v019=UBERON:0004913;9.85e-34;1!UBERON:0003703;9.85e-34;1!UBERON:0001174;9.85e-34;1!UBERON:0004914;9.85e-34;1!UBERON:0002114;3.24e-12;2!UBERON:0001987;1.12e-09;4!UBERON:0002394;1.70e-09;4!UBERON:0003928;1.70e-09;4!UBERON:0000945;7.01e-08;5!UBERON:0010039;7.01e-08;5!UBERON:0002108;7.49e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0004913,9.85e-34,1;UBERON:0003703,9.85e-34,1;UBERON:0001174,9.85e-34,1;UBERON:0004914,9.85e-34,1;UBERON:0002114,3.24e-12,2;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0002108,7.49e-08,4;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6264169483875,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,12.5957365630947,0,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,2.55190607399632,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61086150101257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@NOS3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7876 | |||
|TSSclassifier=S | |||
|UniProt=E7ESA7 | |||
|association_with_transcript=-2bp_to_ENST00000461406_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_9_at_NOS3_5end | |||
|id=chr7:150688166..150688189,+ | |||
|ontology_enrichment_celltype=CL:1000415!1.29e-12!2;CL:0000313!1.44e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.89e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1 | |||
|ontology_enrichment_disease=DOID:305!2.66e-14!106;DOID:3493!4.97e-13!2;DOID:0050687!6.03e-11!143;DOID:0050615!4.10e-09!16;DOID:299!3.18e-08!25;DOID:1325!4.44e-08!7;DOID:3904!4.44e-08!7;DOID:2152!1.44e-07!1;DOID:0050619!3.62e-07!1;DOID:1357!3.62e-07!1;DOID:5093!5.86e-07!4;DOID:1612!5.86e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.07e-17;2!DOID:4929;1.27e-17;2!DOID:3119;2.29e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.07e-17,2;DOID:4929,1.27e-17,2;DOID:3119,2.29e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002294!7.87e-14!7;UBERON:0001173!7.87e-14!7;UBERON:0004912!7.87e-14!7;UBERON:0005911!3.58e-11!82;UBERON:0000077!5.85e-11!130;UBERON:0002110!1.06e-08!3;UBERON:0006242!1.06e-08!3;UBERON:0000466!1.17e-08!126;UBERON:0009497!4.85e-08!25;UBERON:0000015!4.85e-08!25;UBERON:0002423!4.85e-08!25;UBERON:0006235!4.85e-08!25;UBERON:0004161!4.85e-08!25;UBERON:0001041!1.26e-07!98;UBERON:0004913!1.36e-07!1;UBERON:0003703!1.36e-07!1;UBERON:0001174!1.36e-07!1;UBERON:0004914!1.36e-07!1;UBERON:0004911!1.44e-07!1;UBERON:0004119!1.62e-07!169;UBERON:0000925!1.62e-07!169;UBERON:0006595!1.62e-07!169;UBERON:0002171!1.97e-07!1;UBERON:0006518!1.97e-07!1;UBERON:0008949!1.97e-07!1;UBERON:0000101!1.97e-07!1;UBERON:0002167!1.97e-07!1;UBERON:0001007!2.19e-07!155;UBERON:0001555!2.19e-07!155;UBERON:0007026!2.19e-07!155;UBERON:0009569!2.25e-07!113;UBERON:0003929!2.79e-07!54;UBERON:0001764!3.62e-07!1;UBERON:0001825!3.62e-07!1;UBERON:0004921!3.64e-07!129;UBERON:0004185!3.64e-07!129;UBERON:0002394!5.05e-07!4;UBERON:0003928!5.05e-07!4;UBERON:0005153!5.24e-07!37;UBERON:0004807!5.66e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;9.85e-34;1!UBERON:0003703;9.85e-34;1!UBERON:0001174;9.85e-34;1!UBERON:0004914;9.85e-34;1!UBERON:0002114;3.24e-12;2!UBERON:0001987;1.12e-09;4!UBERON:0002394;1.70e-09;4!UBERON:0003928;1.70e-09;4!UBERON:0000945;7.01e-08;5!UBERON:0010039;7.01e-08;5!UBERON:0002108;7.49e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,9.85e-34,1;UBERON:0003703,9.85e-34,1;UBERON:0001174,9.85e-34,1;UBERON:0004914,9.85e-34,1;UBERON:0002114,3.24e-12,2;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0002108,7.49e-08,4;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6264169483875,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,12.5957365630947,0,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,2.55190607399632,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61086150101257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@NOS3 | |||
}} |
Revision as of 23:58, 13 September 2013
Short description: | p9@NOS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_NOS3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -2bp_to_ENST00000461406_5end |
EntrezGene: | NOS3 |
HGNC: | 7876 |
UniProt: | E7ESA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 9.85e-34 | 1 |
extrahepatic bile duct | 9.85e-34 | 1 |
common bile duct | 9.85e-34 | 1 |
duodenal papilla | 9.85e-34 | 1 |
duodenum | 3.24e-12 | 2 |
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |
small intestine | 7.49e-08 | 4 |
bile duct | 9.49e-07 | 6 |
digestive system duct | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.07e-17 | 2 |
tubular adenocarcinoma | 1.27e-17 | 2 |
gastrointestinal system cancer | 2.29e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.