FFCP PHASE1:Hg19::chr7:142583478..142583496,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55503|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14006|TSSclassifier=S|UniProt=C9J9W0,Q9H1D0|association_with_transcript=0bp_to_ENST00000436401,NM_018646_5end|coexpression_cluster_id=C34|description=CAGE_peak_1_at_TRPV6_5end|id=chr7:142583478..142583496,-|ontology_enrichment_celltype=CL:0000039!4.27e-07!7;CL:0000586!4.27e-07!7|ontology_enrichment_celltype_v019=CL:0002178;7.40e-08;3|ontology_enrichment_celltype_v019_2=CL:0000223,2.51e-08,58;CL:0002178,7.79e-08,3|ontology_enrichment_development_v019=UBERON:0003124;7.48e-07;1!UBERON:0008801;9.80e-07;1|ontology_enrichment_disease=DOID:305!5.89e-08!106;DOID:1749!9.53e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.38e-08,106|ontology_enrichment_uberon=UBERON:0004921!2.12e-17!129;UBERON:0004185!2.12e-17!129;UBERON:0001007!6.21e-17!155;UBERON:0001555!6.21e-17!155;UBERON:0007026!6.21e-17!155;UBERON:0004119!1.92e-15!169;UBERON:0000925!1.92e-15!169;UBERON:0006595!1.92e-15!169;UBERON:0000077!2.77e-14!130;UBERON:0001041!6.44e-11!98;UBERON:0007023!9.26e-10!115;UBERON:0000466!2.03e-09!126;UBERON:0005911!6.09e-08!82;UBERON:0002530!2.86e-07!59;UBERON:0000464!2.98e-07!104;UBERON:0005409!8.30e-07!35|ontology_enrichment_uberon_v019=UBERON:0001829;3.00e-11;2!UBERON:0002365;4.26e-09;31!UBERON:0002330;4.26e-09;31!UBERON:0001041;4.27e-09;14!UBERON:0004921;2.13e-08;33!UBERON:0001044;2.19e-08;6!UBERON:0003293;2.19e-08;6!UBERON:0003294;2.19e-08;6!UBERON:0010047;2.19e-08;6!UBERON:0003408;2.19e-08;6!UBERON:0000167;2.19e-08;6!UBERON:0001831;9.80e-07;1!UBERON:0001567;9.80e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.09e-11,2;UBERON:0002365,3.25e-09,31;UBERON:0002330,3.25e-09,31;UBERON:0001044,1.84e-08,6;UBERON:0003293,1.84e-08,6;UBERON:0003294,1.84e-08,6;UBERON:0010047,1.84e-08,6;UBERON:0000167,1.84e-08,6;UBERON:0004921,2.02e-08,118;UBERON:0001007,3.74e-07,145;UBERON:0001555,3.74e-07,145;UBERON:0007026,3.74e-07,145;UBERON:0004119,4.42e-07,160;UBERON:0000925,4.42e-07,160;UBERON:0006595,4.42e-07,160;UBERON:0002530,9.31e-07,59;UBERON:0001831,9.81e-07,1;UBERON:0001567,9.81e-07,1;UBERON:0008801,9.81e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,1.10689594688802,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8895452136143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33732061132974,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,4.19807999981739,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0,0,0,6.13464474825854,0.0769502585037971,0,0.922255617552241,1.34636466614658,0.54323685961004,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0,0,0,0,0,0,0,0,6.84826166262314,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,1.82824333818845,0,0,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0,1.95551382734803,0,0.85381197895741,0,2.16135625731159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,1.96854963029498,0,0,0,0.160753148465019,0,0,0,2.32140586367385,0,0.335434687599266,1.26089131678717,3.04236611182989,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,1.40963004463334,0.320362237703084,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,1.03973099535304,0,0,0,0,0,28.1345044043913,4.7143205006656,0,0,0,0,0,0,0,9.86863980342928,0.496211178389294,0,2.42748612515231,0,0,0,0.227662191351298,72.4698364228759,0,0,0,0,0,0.333694205676207,2.8257513426185,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,15.0579575587097,0,0,0.423387050190929,0,0,0,0,3.04265724207253,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.848915739187391,0,0.940634592723046,0,0.471353094203252,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,1.05868461514708,0,0.730336388246517,1.83491713361816,0,0,0,0.436350690340377,4.7612415646386,0,0,0,0,0,0,0.203977659483963,2.13773924212448,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.404234377916439,0.435433495793923,0,0.673520530145875,0.286888821570705,0,0.162806537221949,0,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0.665756774185513,0,0|short_description=p1@TRPV6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14006 | |||
|TSSclassifier=S | |||
|UniProt=C9J9W0,Q9H1D0 | |||
|association_with_transcript=0bp_to_ENST00000436401,NM_018646_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_TRPV6_5end | |||
|id=chr7:142583478..142583496,- | |||
|ontology_enrichment_celltype=CL:0000039!4.27e-07!7;CL:0000586!4.27e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002178;7.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.51e-08,58;CL:0002178,7.79e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-07;1!UBERON:0008801;9.80e-07;1 | |||
|ontology_enrichment_disease=DOID:305!5.89e-08!106;DOID:1749!9.53e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.38e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.12e-17!129;UBERON:0004185!2.12e-17!129;UBERON:0001007!6.21e-17!155;UBERON:0001555!6.21e-17!155;UBERON:0007026!6.21e-17!155;UBERON:0004119!1.92e-15!169;UBERON:0000925!1.92e-15!169;UBERON:0006595!1.92e-15!169;UBERON:0000077!2.77e-14!130;UBERON:0001041!6.44e-11!98;UBERON:0007023!9.26e-10!115;UBERON:0000466!2.03e-09!126;UBERON:0005911!6.09e-08!82;UBERON:0002530!2.86e-07!59;UBERON:0000464!2.98e-07!104;UBERON:0005409!8.30e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.00e-11;2!UBERON:0002365;4.26e-09;31!UBERON:0002330;4.26e-09;31!UBERON:0001041;4.27e-09;14!UBERON:0004921;2.13e-08;33!UBERON:0001044;2.19e-08;6!UBERON:0003293;2.19e-08;6!UBERON:0003294;2.19e-08;6!UBERON:0010047;2.19e-08;6!UBERON:0003408;2.19e-08;6!UBERON:0000167;2.19e-08;6!UBERON:0001831;9.80e-07;1!UBERON:0001567;9.80e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.09e-11,2;UBERON:0002365,3.25e-09,31;UBERON:0002330,3.25e-09,31;UBERON:0001044,1.84e-08,6;UBERON:0003293,1.84e-08,6;UBERON:0003294,1.84e-08,6;UBERON:0010047,1.84e-08,6;UBERON:0000167,1.84e-08,6;UBERON:0004921,2.02e-08,118;UBERON:0001007,3.74e-07,145;UBERON:0001555,3.74e-07,145;UBERON:0007026,3.74e-07,145;UBERON:0004119,4.42e-07,160;UBERON:0000925,4.42e-07,160;UBERON:0006595,4.42e-07,160;UBERON:0002530,9.31e-07,59;UBERON:0001831,9.81e-07,1;UBERON:0001567,9.81e-07,1;UBERON:0008801,9.81e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,1.10689594688802,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8895452136143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33732061132974,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,4.19807999981739,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0,0,0,6.13464474825854,0.0769502585037971,0,0.922255617552241,1.34636466614658,0.54323685961004,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0,0,0,0,0,0,0,0,6.84826166262314,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,1.82824333818845,0,0,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0,1.95551382734803,0,0.85381197895741,0,2.16135625731159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,1.96854963029498,0,0,0,0.160753148465019,0,0,0,2.32140586367385,0,0.335434687599266,1.26089131678717,3.04236611182989,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,1.40963004463334,0.320362237703084,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,1.03973099535304,0,0,0,0,0,28.1345044043913,4.7143205006656,0,0,0,0,0,0,0,9.86863980342928,0.496211178389294,0,2.42748612515231,0,0,0,0.227662191351298,72.4698364228759,0,0,0,0,0,0.333694205676207,2.8257513426185,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0,0,15.0579575587097,0,0,0.423387050190929,0,0,0,0,3.04265724207253,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.848915739187391,0,0.940634592723046,0,0.471353094203252,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,1.05868461514708,0,0.730336388246517,1.83491713361816,0,0,0,0.436350690340377,4.7612415646386,0,0,0,0,0,0,0.203977659483963,2.13773924212448,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.404234377916439,0.435433495793923,0,0.673520530145875,0.286888821570705,0,0.162806537221949,0,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p1@TRPV6 | |||
}} |
Revision as of 23:43, 13 September 2013
Short description: | p1@TRPV6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRPV6_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000436401, NM_018646_5end |
EntrezGene: | TRPV6 |
HGNC: | 14006 |
UniProt: | C9J9W0Q9H1D0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.51e-08 | 58 |
epithelial cell of stomach | 7.79e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.09e-11 | 2 |
exocrine gland | 3.25e-09 | 31 |
exocrine system | 3.25e-09 | 31 |
saliva-secreting gland | 1.84e-08 | 6 |
gland of oral region | 1.84e-08 | 6 |
gland of foregut | 1.84e-08 | 6 |
oral gland | 1.84e-08 | 6 |
oral cavity | 1.84e-08 | 6 |
subdivision of digestive tract | 2.02e-08 | 118 |
digestive system | 3.74e-07 | 145 |
digestive tract | 3.74e-07 | 145 |
primitive gut | 3.74e-07 | 145 |
endoderm-derived structure | 4.42e-07 | 160 |
endoderm | 4.42e-07 | 160 |
presumptive endoderm | 4.42e-07 | 160 |
gland | 9.31e-07 | 59 |
parotid gland | 9.81e-07 | 1 |
cheek | 9.81e-07 | 1 |
parotid gland primordium | 9.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.38e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.