FFCP PHASE1:Mm9::chr2:180889957..180889998,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:180889957..180889998,+|id=chr2:180889957..180889998,+|ontology_enrichment_celltype=CL:0000117!2.39e-15!23;CL:0000337!2.39e-15!23;CL:0000540!2.92e-08!33;CL:0000047!2.92e-08!33;CL:0000031!2.92e-08!33;CL:0000404!2.92e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-10,23;CL:0000337,1.11e-10,23;CL:0002614,1.08e-08,3;CL:0002610,3.10e-08,3;CL:0000540,9.81e-07,33;CL:0000047,9.81e-07,33;CL:0000031,9.81e-07,33;CL:0000404,9.81e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.62e-23!52;UBERON:0005068!5.62e-23!52;UBERON:0006241!5.62e-23!52;UBERON:0007135!5.62e-23!52;UBERON:0000955!1.01e-21!50;UBERON:0006238!1.01e-21!50;UBERON:0002616!4.56e-21!49;UBERON:0002020!2.63e-20!34;UBERON:0000073!5.49e-20!75;UBERON:0001016!5.49e-20!75;UBERON:0001017!2.49e-19!73;UBERON:0005743!2.49e-19!73;UBERON:0002346!5.79e-19!71;UBERON:0003075!5.79e-19!71;UBERON:0007284!5.79e-19!71;UBERON:0004121!7.22e-18!102;UBERON:0000924!7.22e-18!102;UBERON:0006601!7.22e-18!102;UBERON:0000033!1.12e-17!63;UBERON:0003080!1.01e-16!40;UBERON:0002791!3.02e-16!29;UBERON:0003528!3.02e-16!29;UBERON:0001893!3.02e-16!29;UBERON:0002780!4.82e-16!39;UBERON:0001890!4.82e-16!39;UBERON:0006240!4.82e-16!39;UBERON:0000025!1.03e-15!114;UBERON:0004111!4.04e-14!122;UBERON:0003056!7.16e-14!49;UBERON:0000956!5.43e-12!21;UBERON:0001869!5.43e-12!21;UBERON:0000203!5.43e-12!21;UBERON:0002619!7.45e-10!17;UBERON:0002021!8.93e-10!10;UBERON:0000411!8.93e-10!10;UBERON:0001950!8.93e-10!10;UBERON:0007100!6.84e-09!18;UBERON:0000948!6.84e-09!18;UBERON:0005498!6.84e-09!18;UBERON:0004140!6.84e-09!18;UBERON:0009881!6.84e-09!18;UBERON:0004141!6.84e-09!18;UBERON:0003084!6.84e-09!18;UBERON:0007005!6.84e-09!18;UBERON:0004139!6.84e-09!18;UBERON:0004291!6.84e-09!18;UBERON:0007811!7.34e-09!86;UBERON:0000477!5.14e-07!154;UBERON:0000153!5.77e-07!94;UBERON:0003076!6.31e-07!12;UBERON:0003057!6.31e-07!12;UBERON:0002298!8.94e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.89e-28,54;UBERON:0001049,2.54e-22,52;UBERON:0005068,2.54e-22,52;UBERON:0006241,2.54e-22,52;UBERON:0007135,2.54e-22,52;UBERON:0002020,9.03e-21,34;UBERON:0001017,1.50e-20,73;UBERON:0001016,8.04e-20,75;UBERON:0010314,6.45e-19,92;UBERON:0002021,1.14e-17,10;UBERON:0000411,1.14e-17,10;UBERON:0001950,1.14e-17,10;UBERON:0002616,2.24e-17,46;UBERON:0002346,5.17e-17,64;UBERON:0003075,5.17e-17,64;UBERON:0007284,5.17e-17,64;UBERON:0000955,6.74e-17,47;UBERON:0006238,6.74e-17,47;UBERON:0004121,1.89e-15,95;UBERON:0000924,1.89e-15,95;UBERON:0006601,1.89e-15,95;UBERON:0003528,5.23e-15,29;UBERON:0002791,5.23e-15,29;UBERON:0001893,5.23e-15,29;UBERON:0003080,1.54e-14,40;UBERON:0010371,3.50e-14,73;UBERON:0002780,2.26e-13,39;UBERON:0001890,2.26e-13,39;UBERON:0006240,2.26e-13,39;UBERON:0000025,8.66e-13,114;UBERON:0004111,1.71e-12,122;UBERON:0002619,8.67e-12,17;UBERON:0000956,3.88e-11,21;UBERON:0001869,3.88e-11,21;UBERON:0000203,3.88e-11,21;UBERON:0003056,4.35e-11,49;UBERON:0002950,3.43e-10,4;UBERON:0001891,3.43e-10,4;UBERON:0009616,3.43e-10,4;UBERON:0010286,3.43e-10,4;UBERON:0003076,8.37e-09,12;UBERON:0003057,8.37e-09,12;UBERON:0002038,1.08e-08,3;UBERON:0009663,1.08e-08,3;UBERON:0009661,1.08e-08,3;UBERON:0000125,1.08e-08,3;UBERON:0002308,1.08e-08,3;UBERON:0004684,3.10e-08,3;UBERON:0002275,3.10e-08,3;UBERON:0001948,9.26e-08,5;UBERON:0002315,9.26e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.420649922702764,4.85606673486466,3.53389665522582,0.61245399607477,0.287536413054709,0.919218786610021,7.70811166995721,3.57524546638526,3.22573719838111,0.395658863190582,0.548925861614458,0,8.93385596804419,5.6276261003168,5.19514042441154,1.47314292736834,2.13557521198654,0.559198337475902,0.151452386666368,0.226714680320357,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0.485300549842228,0.883366073841574,1.45462575940567,0,0.585561594023094,3.77004072264219,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,0.628271760564322,2.08589184230732,2.81287003063364,1.87009240103604,1.29793010454206,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,0.154267112887378,0.930135779001631,1.07309360559848,0.350296027101508,0.658239399653922,1.97000956894914,1.94565142910054,4.23979963533464,2.41505126820156,3.35516046900929,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,1.9266070798535,3.5163505977661,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.86447756719698,9.96748457593388,1.37016503954128,3.7769694869485,2.70009000092722,3.15224842256954,3.62513927187364,3.10656187051092,0,0,0.170733605754134,0,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0,0.382576664137687,0,0.463735671240843|short_description=p@chr2:180889957..180889998,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:180889957..180889998,+ | |||
|id=chr2:180889957..180889998,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.39e-15!23;CL:0000337!2.39e-15!23;CL:0000540!2.92e-08!33;CL:0000047!2.92e-08!33;CL:0000031!2.92e-08!33;CL:0000404!2.92e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-10,23;CL:0000337,1.11e-10,23;CL:0002614,1.08e-08,3;CL:0002610,3.10e-08,3;CL:0000540,9.81e-07,33;CL:0000047,9.81e-07,33;CL:0000031,9.81e-07,33;CL:0000404,9.81e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.62e-23!52;UBERON:0005068!5.62e-23!52;UBERON:0006241!5.62e-23!52;UBERON:0007135!5.62e-23!52;UBERON:0000955!1.01e-21!50;UBERON:0006238!1.01e-21!50;UBERON:0002616!4.56e-21!49;UBERON:0002020!2.63e-20!34;UBERON:0000073!5.49e-20!75;UBERON:0001016!5.49e-20!75;UBERON:0001017!2.49e-19!73;UBERON:0005743!2.49e-19!73;UBERON:0002346!5.79e-19!71;UBERON:0003075!5.79e-19!71;UBERON:0007284!5.79e-19!71;UBERON:0004121!7.22e-18!102;UBERON:0000924!7.22e-18!102;UBERON:0006601!7.22e-18!102;UBERON:0000033!1.12e-17!63;UBERON:0003080!1.01e-16!40;UBERON:0002791!3.02e-16!29;UBERON:0003528!3.02e-16!29;UBERON:0001893!3.02e-16!29;UBERON:0002780!4.82e-16!39;UBERON:0001890!4.82e-16!39;UBERON:0006240!4.82e-16!39;UBERON:0000025!1.03e-15!114;UBERON:0004111!4.04e-14!122;UBERON:0003056!7.16e-14!49;UBERON:0000956!5.43e-12!21;UBERON:0001869!5.43e-12!21;UBERON:0000203!5.43e-12!21;UBERON:0002619!7.45e-10!17;UBERON:0002021!8.93e-10!10;UBERON:0000411!8.93e-10!10;UBERON:0001950!8.93e-10!10;UBERON:0007100!6.84e-09!18;UBERON:0000948!6.84e-09!18;UBERON:0005498!6.84e-09!18;UBERON:0004140!6.84e-09!18;UBERON:0009881!6.84e-09!18;UBERON:0004141!6.84e-09!18;UBERON:0003084!6.84e-09!18;UBERON:0007005!6.84e-09!18;UBERON:0004139!6.84e-09!18;UBERON:0004291!6.84e-09!18;UBERON:0007811!7.34e-09!86;UBERON:0000477!5.14e-07!154;UBERON:0000153!5.77e-07!94;UBERON:0003076!6.31e-07!12;UBERON:0003057!6.31e-07!12;UBERON:0002298!8.94e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.89e-28,54;UBERON:0001049,2.54e-22,52;UBERON:0005068,2.54e-22,52;UBERON:0006241,2.54e-22,52;UBERON:0007135,2.54e-22,52;UBERON:0002020,9.03e-21,34;UBERON:0001017,1.50e-20,73;UBERON:0001016,8.04e-20,75;UBERON:0010314,6.45e-19,92;UBERON:0002021,1.14e-17,10;UBERON:0000411,1.14e-17,10;UBERON:0001950,1.14e-17,10;UBERON:0002616,2.24e-17,46;UBERON:0002346,5.17e-17,64;UBERON:0003075,5.17e-17,64;UBERON:0007284,5.17e-17,64;UBERON:0000955,6.74e-17,47;UBERON:0006238,6.74e-17,47;UBERON:0004121,1.89e-15,95;UBERON:0000924,1.89e-15,95;UBERON:0006601,1.89e-15,95;UBERON:0003528,5.23e-15,29;UBERON:0002791,5.23e-15,29;UBERON:0001893,5.23e-15,29;UBERON:0003080,1.54e-14,40;UBERON:0010371,3.50e-14,73;UBERON:0002780,2.26e-13,39;UBERON:0001890,2.26e-13,39;UBERON:0006240,2.26e-13,39;UBERON:0000025,8.66e-13,114;UBERON:0004111,1.71e-12,122;UBERON:0002619,8.67e-12,17;UBERON:0000956,3.88e-11,21;UBERON:0001869,3.88e-11,21;UBERON:0000203,3.88e-11,21;UBERON:0003056,4.35e-11,49;UBERON:0002950,3.43e-10,4;UBERON:0001891,3.43e-10,4;UBERON:0009616,3.43e-10,4;UBERON:0010286,3.43e-10,4;UBERON:0003076,8.37e-09,12;UBERON:0003057,8.37e-09,12;UBERON:0002038,1.08e-08,3;UBERON:0009663,1.08e-08,3;UBERON:0009661,1.08e-08,3;UBERON:0000125,1.08e-08,3;UBERON:0002308,1.08e-08,3;UBERON:0004684,3.10e-08,3;UBERON:0002275,3.10e-08,3;UBERON:0001948,9.26e-08,5;UBERON:0002315,9.26e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.420649922702764,4.85606673486466,3.53389665522582,0.61245399607477,0.287536413054709,0.919218786610021,7.70811166995721,3.57524546638526,3.22573719838111,0.395658863190582,0.548925861614458,0,8.93385596804419,5.6276261003168,5.19514042441154,1.47314292736834,2.13557521198654,0.559198337475902,0.151452386666368,0.226714680320357,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0,0.125666591329675,0,0,0,0.485300549842228,0.883366073841574,1.45462575940567,0,0.585561594023094,3.77004072264219,0.255457055208591,0,0,0,1.04853447583376,1.37250180845588,0.628271760564322,2.08589184230732,2.81287003063364,1.87009240103604,1.29793010454206,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,0.154267112887378,0.930135779001631,1.07309360559848,0.350296027101508,0.658239399653922,1.97000956894914,1.94565142910054,4.23979963533464,2.41505126820156,3.35516046900929,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0,1.9266070798535,3.5163505977661,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.86447756719698,9.96748457593388,1.37016503954128,3.7769694869485,2.70009000092722,3.15224842256954,3.62513927187364,3.10656187051092,0,0,0.170733605754134,0,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0,0.382576664137687,0,0.463735671240843 | |||
|short_description=p@chr2:180889957..180889998,+ | |||
}} |
Revision as of 23:15, 13 September 2013
Short description: | p@chr2:180889957..180889998, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:180889957..180889998, + |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.11e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-10 | 23 |
neuron of the substantia nigra | 1.08e-08 | 3 |
raphe nuclei neuron | 3.10e-08 | 3 |
neuron | 9.81e-07 | 33 |
neuronal stem cell | 9.81e-07 | 33 |
neuroblast | 9.81e-07 | 33 |
electrically signaling cell | 9.81e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.