FFCP PHASE1:Mm9::chr2:177853817..177853863,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74189|HGNC=|MCL_coexpression_id=30|UniProt=Q8BYK5|association_with_transcript=-20bp_to_ENSMUST00000108916_5end|description=CAGE_peak_3_at_Phactr3_5end|id=chr2:177853817..177853863,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,9.83e-09,23;CL:0000337,9.83e-09,23;CL:0002610,1.07e-07,3;CL:0002614,3.56e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.66e-19!73;UBERON:0005743!9.66e-19!73;UBERON:0001049!1.91e-18!52;UBERON:0005068!1.91e-18!52;UBERON:0006241!1.91e-18!52;UBERON:0007135!1.91e-18!52;UBERON:0000033!2.01e-18!63;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0000955!3.09e-17!50;UBERON:0006238!3.09e-17!50;UBERON:0002346!4.37e-17!71;UBERON:0003075!4.37e-17!71;UBERON:0007284!4.37e-17!71;UBERON:0002616!1.20e-16!49;UBERON:0004121!2.70e-16!102;UBERON:0000924!2.70e-16!102;UBERON:0006601!2.70e-16!102;UBERON:0003056!9.36e-16!49;UBERON:0007811!2.07e-13!86;UBERON:0003080!2.74e-12!40;UBERON:0000153!3.07e-12!94;UBERON:0002780!1.60e-11!39;UBERON:0001890!1.60e-11!39;UBERON:0006240!1.60e-11!39;UBERON:0002020!1.80e-11!34;UBERON:0002021!8.72e-09!10;UBERON:0000411!8.72e-09!10;UBERON:0001950!8.72e-09!10;UBERON:0002791!2.50e-08!29;UBERON:0003528!2.50e-08!29;UBERON:0001893!2.50e-08!29;UBERON:0003076!3.16e-07!12;UBERON:0003057!3.16e-07!12;UBERON:0002619!4.50e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.10e-32,54;UBERON:0001049,1.50e-28,52;UBERON:0005068,1.50e-28,52;UBERON:0006241,1.50e-28,52;UBERON:0007135,1.50e-28,52;UBERON:0002346,4.15e-25,64;UBERON:0003075,4.15e-25,64;UBERON:0007284,4.15e-25,64;UBERON:0001017,5.20e-25,73;UBERON:0001016,4.07e-24,75;UBERON:0010371,5.09e-21,73;UBERON:0002020,3.00e-20,34;UBERON:0002616,3.96e-20,46;UBERON:0004121,8.17e-20,95;UBERON:0000924,8.17e-20,95;UBERON:0006601,8.17e-20,95;UBERON:0000955,1.45e-19,47;UBERON:0006238,1.45e-19,47;UBERON:0002021,8.40e-18,10;UBERON:0000411,8.40e-18,10;UBERON:0001950,8.40e-18,10;UBERON:0003076,9.72e-16,12;UBERON:0003057,9.72e-16,12;UBERON:0003080,2.54e-15,40;UBERON:0010314,5.00e-15,92;UBERON:0003056,2.76e-14,49;UBERON:0002780,6.36e-14,39;UBERON:0001890,6.36e-14,39;UBERON:0006240,6.36e-14,39;UBERON:0003528,1.29e-13,29;UBERON:0002791,1.29e-13,29;UBERON:0001893,1.29e-13,29;UBERON:0000025,9.04e-13,114;UBERON:0002619,1.39e-11,17;UBERON:0004111,2.17e-11,122;UBERON:0002240,2.85e-11,6;UBERON:0005174,2.85e-11,6;UBERON:0001137,2.85e-11,6;UBERON:0000956,1.16e-10,21;UBERON:0001869,1.16e-10,21;UBERON:0000203,1.16e-10,21;UBERON:0001948,2.23e-09,5;UBERON:0002315,2.23e-09,5;UBERON:0002950,3.32e-09,4;UBERON:0001891,3.32e-09,4;UBERON:0009616,3.32e-09,4;UBERON:0010286,3.32e-09,4;UBERON:0004684,1.07e-07,3;UBERON:0002275,1.07e-07,3;UBERON:0002038,3.56e-07,3;UBERON:0009663,3.56e-07,3;UBERON:0009661,3.56e-07,3;UBERON:0000125,3.56e-07,3;UBERON:0002308,3.56e-07,3;UBERON:0000483,9.20e-07,174|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.42825492201902,3.97563373712904,0.122490799214954,0.191690942036473,0,7.70811166995721,9.3211756802187,8.75557239560588,0.131886287730194,0,0,5.58365998002762,5.6276261003168,5.04234217663473,3.83017161115768,2.70506193518296,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,62.3623097634595,69.955200075694,0,0,0,0,8.68785708547972,2.28750301409313,0.125654352112864,1.91206752211504,1.27857728665165,8.3115217823824,7.78758062725237,1.12023300235348,0.124406970610093,0,1.05220927943237,0.390361328888111,0,0.720248519221397,0.452114453507145,0.476255494059295,0.640568601424249,0.374806898238915,2.58703370739016,1.07783996466421,0.756424320671277,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.407302655690628,0.193952487167626,0.350679099451593,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,4.72905432318573,4.87222317227305,3.98636921643718,0,0.172684981865896,0,0,0,0,0,5.77982123956051,6.32943107597897,0,0,0,0,0,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.963963949265421,0.709700426041343,0.35613120733451,2.11753047159649,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0.822745103010605,0.304464949114599,1.17335854031855,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.897099276263873,1.15820943319968,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0.17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| ||
|EntrezGene=74189 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=Q8BYK5 | |||
|association_with_transcript=-20bp_to_ENSMUST00000108916_5end | |||
|description=CAGE_peak_3_at_Phactr3_5end | |||
|id=chr2:177853817..177853863,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.83e-09,23;CL:0000337,9.83e-09,23;CL:0002610,1.07e-07,3;CL:0002614,3.56e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.66e-19!73;UBERON:0005743!9.66e-19!73;UBERON:0001049!1.91e-18!52;UBERON:0005068!1.91e-18!52;UBERON:0006241!1.91e-18!52;UBERON:0007135!1.91e-18!52;UBERON:0000033!2.01e-18!63;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0000955!3.09e-17!50;UBERON:0006238!3.09e-17!50;UBERON:0002346!4.37e-17!71;UBERON:0003075!4.37e-17!71;UBERON:0007284!4.37e-17!71;UBERON:0002616!1.20e-16!49;UBERON:0004121!2.70e-16!102;UBERON:0000924!2.70e-16!102;UBERON:0006601!2.70e-16!102;UBERON:0003056!9.36e-16!49;UBERON:0007811!2.07e-13!86;UBERON:0003080!2.74e-12!40;UBERON:0000153!3.07e-12!94;UBERON:0002780!1.60e-11!39;UBERON:0001890!1.60e-11!39;UBERON:0006240!1.60e-11!39;UBERON:0002020!1.80e-11!34;UBERON:0002021!8.72e-09!10;UBERON:0000411!8.72e-09!10;UBERON:0001950!8.72e-09!10;UBERON:0002791!2.50e-08!29;UBERON:0003528!2.50e-08!29;UBERON:0001893!2.50e-08!29;UBERON:0003076!3.16e-07!12;UBERON:0003057!3.16e-07!12;UBERON:0002619!4.50e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.10e-32,54;UBERON:0001049,1.50e-28,52;UBERON:0005068,1.50e-28,52;UBERON:0006241,1.50e-28,52;UBERON:0007135,1.50e-28,52;UBERON:0002346,4.15e-25,64;UBERON:0003075,4.15e-25,64;UBERON:0007284,4.15e-25,64;UBERON:0001017,5.20e-25,73;UBERON:0001016,4.07e-24,75;UBERON:0010371,5.09e-21,73;UBERON:0002020,3.00e-20,34;UBERON:0002616,3.96e-20,46;UBERON:0004121,8.17e-20,95;UBERON:0000924,8.17e-20,95;UBERON:0006601,8.17e-20,95;UBERON:0000955,1.45e-19,47;UBERON:0006238,1.45e-19,47;UBERON:0002021,8.40e-18,10;UBERON:0000411,8.40e-18,10;UBERON:0001950,8.40e-18,10;UBERON:0003076,9.72e-16,12;UBERON:0003057,9.72e-16,12;UBERON:0003080,2.54e-15,40;UBERON:0010314,5.00e-15,92;UBERON:0003056,2.76e-14,49;UBERON:0002780,6.36e-14,39;UBERON:0001890,6.36e-14,39;UBERON:0006240,6.36e-14,39;UBERON:0003528,1.29e-13,29;UBERON:0002791,1.29e-13,29;UBERON:0001893,1.29e-13,29;UBERON:0000025,9.04e-13,114;UBERON:0002619,1.39e-11,17;UBERON:0004111,2.17e-11,122;UBERON:0002240,2.85e-11,6;UBERON:0005174,2.85e-11,6;UBERON:0001137,2.85e-11,6;UBERON:0000956,1.16e-10,21;UBERON:0001869,1.16e-10,21;UBERON:0000203,1.16e-10,21;UBERON:0001948,2.23e-09,5;UBERON:0002315,2.23e-09,5;UBERON:0002950,3.32e-09,4;UBERON:0001891,3.32e-09,4;UBERON:0009616,3.32e-09,4;UBERON:0010286,3.32e-09,4;UBERON:0004684,1.07e-07,3;UBERON:0002275,1.07e-07,3;UBERON:0002038,3.56e-07,3;UBERON:0009663,3.56e-07,3;UBERON:0009661,3.56e-07,3;UBERON:0000125,3.56e-07,3;UBERON:0002308,3.56e-07,3;UBERON:0000483,9.20e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.42825492201902,3.97563373712904,0.122490799214954,0.191690942036473,0,7.70811166995721,9.3211756802187,8.75557239560588,0.131886287730194,0,0,5.58365998002762,5.6276261003168,5.04234217663473,3.83017161115768,2.70506193518296,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,62.3623097634595,69.955200075694,0,0,0,0,8.68785708547972,2.28750301409313,0.125654352112864,1.91206752211504,1.27857728665165,8.3115217823824,7.78758062725237,1.12023300235348,0.124406970610093,0,1.05220927943237,0.390361328888111,0,0.720248519221397,0.452114453507145,0.476255494059295,0.640568601424249,0.374806898238915,2.58703370739016,1.07783996466421,0.756424320671277,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0.571242563048644,0,0.407302655690628,0.193952487167626,0.350679099451593,0.379419222745544,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,4.72905432318573,4.87222317227305,3.98636921643718,0,0.172684981865896,0,0,0,0,0,5.77982123956051,6.32943107597897,0,0,0,0,0,0.238968797952552,0.445597348164788,1.13230612315533,0,0.292255857911312,0.395287777946524,0.963963949265421,0.709700426041343,0.35613120733451,2.11753047159649,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0.822745103010605,0.304464949114599,1.17335854031855,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0.897099276263873,1.15820943319968,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0.201652370273681,0.194915761479505,0.0962118416403295,0,0,0.221985953374065,0,0.335769232728157,0,0.187682475451182,0,0,0,5.0827665835536,2.30162618253588,1.71868654031819,2.749650917499,4.7955776383945,3.7769694869485,3.37511250115903,2.70192721934532,2.26571204492102,2.5888015587591,1.14166082342594,0.798049746802062,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0,0,0,0.25347929989024,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0,0,0.342869252385415,0.887379030796687,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0,0.231867835620421 | |||
|short_description=p3@Phactr3 | |||
}} |
Revision as of 23:09, 13 September 2013
Short description: | p3@Phactr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Phactr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -20bp_to_ENSMUST00000108916_5end |
EntrezGene: | Phactr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.83e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.83e-09 | 23 |
raphe nuclei neuron | 1.07e-07 | 3 |
neuron of the substantia nigra | 3.56e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.