FFCP PHASE1:Hg19::chr7:116312178..116312192,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4233|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7029|TSSclassifier=S|UniProt=C9JVH4|association_with_transcript=-55bp_to_ENST00000437703_5end|coexpression_cluster_id=C1534|description=CAGE_peak_7_at_MET_5end|id=chr7:116312178..116312192,+|ontology_enrichment_celltype=CL:0000066!1.61e-33!254;CL:0002076!2.75e-09!43;CL:0000223!6.80e-09!59;CL:0002321!1.40e-08!248;CL:0000220!1.54e-08!246;CL:0000076!2.79e-07!62;CL:0000077!5.12e-07!19|ontology_enrichment_celltype_v019=CL:0002076;3.79e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,2.80e-26,253;CL:0002076,2.15e-08,42;CL:0000223,2.35e-08,58|ontology_enrichment_development_v019=UBERON:0008947;1.57e-12;29|ontology_enrichment_disease=DOID:305!4.62e-19!106;DOID:0050687!5.42e-18!143;DOID:14566!1.31e-10!239;DOID:162!7.36e-10!235;DOID:299!5.72e-09!25|ontology_enrichment_disease_v019=DOID:299;2.04e-10;25|ontology_enrichment_disease_v019_2=DOID:305,4.18e-20,106;DOID:0050687,5.01e-18,143;DOID:14566,1.42e-13,239;DOID:162,1.56e-12,235;DOID:299,1.69e-10,25|ontology_enrichment_uberon=UBERON:0004119!9.18e-13!169;UBERON:0000925!9.18e-13!169;UBERON:0006595!9.18e-13!169;UBERON:0001007!3.39e-10!155;UBERON:0001555!3.39e-10!155;UBERON:0007026!3.39e-10!155;UBERON:0000077!2.03e-09!130;UBERON:0004921!4.13e-09!129;UBERON:0004185!4.13e-09!129;UBERON:0000064!1.50e-08!219;UBERON:0000062!7.69e-08!511;UBERON:0008947!8.56e-08!38;UBERON:0003258!8.56e-08!38;UBERON:0005631!1.28e-07!14;UBERON:0000158!1.28e-07!14;UBERON:0000481!1.60e-07!347;UBERON:0000468!3.52e-07!659;UBERON:0000480!3.63e-07!626;UBERON:0000065!3.92e-07!53;UBERON:0000467!4.67e-07!625;UBERON:0001004!8.00e-07!72;UBERON:0003104!9.34e-07!238;UBERON:0009142!9.34e-07!238;UBERON:0000478!9.75e-07!24|ontology_enrichment_uberon_v019=UBERON:0000478;1.45e-10;24!UBERON:0001737;1.85e-10;9!UBERON:0001557;1.85e-10;9!UBERON:0000065;3.54e-09;44!UBERON:0000072;4.76e-09;37!UBERON:0005631;4.22e-07;10!UBERON:0000158;4.22e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0008947,2.15e-12,38;UBERON:0003258,2.15e-12,38;UBERON:0005631,3.54e-11,14;UBERON:0000158,3.54e-11,14;UBERON:0001737,3.93e-11,9;UBERON:0004119,4.14e-11,160;UBERON:0000925,4.14e-11,160;UBERON:0006595,4.14e-11,160;UBERON:0000065,1.20e-10,54;UBERON:0000478,1.82e-10,24;UBERON:0004921,2.57e-09,118;UBERON:0000072,8.28e-09,47;UBERON:0006554,3.01e-08,47;UBERON:0001008,5.85e-08,48;UBERON:0005153,6.47e-08,37;UBERON:0001007,1.07e-07,145;UBERON:0001555,1.07e-07,145;UBERON:0007026,1.07e-07,145;UBERON:0005177,2.04e-07,101;UBERON:0003124,3.18e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,2.62129646556207,1.05506791291381,0,0.331397375727916,0,0,0,0,0.492484232307152,1.83600622119828,0.313454721478088,0.572471974262113,1.23186982565596,0.627713197974014,0,0,0,0,0,0,1.83884244895785,1.50602959389125,0.369754010166788,0.154934401160603,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,0.886917589850256,0.702678285545008,0.261958150995425,0.728590576585084,0,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.982297011124877,0.44905874525234,0.450445921933289,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0.759783069987479,0,0.860509862246441,0.709336764396714,0,0,0.49333509683432,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.226864366320042,1.61450672119976,0.427114777637135,0,3.90118424909723,0.721367704669072,0.515281080091258,0.18611685633159,2.86919764810153,0.292311015483596,0.757301322732344,0.184099797284599,0.161646056818812,0.355009592516614,0.906768884048762,1.01736355386293,0.57978255948989,0.272746120590835,0.573609190778008,0.121973706129595,0.265059536642971,0,0.310983165046111,0.504641701751257,0,0,0.643240938192885,0,0,0,1.77460200059766,2.02301628093722,1.44606617930089,1.65440959098591,1.30727666455444,2.84724742933316,1.61797569792197,1.96221465125346,1.92373578473195,0,0,0,0,1.26755034821831,0,0,0,1.59884970106048,0.514703430895577,1.42675371031213,0,3.01586917234893,1.75918045801206,0,0,0,0.115930404975077,1.52631302506568,0.577465791044295,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.839910640994298,0.283550194484773,1.34337784054272,1.16253575405585,1.53353071666084,0,0,0,0,0,1.96843472305724,0.381988425558278,0,0,0.616964956219941,5.1058319833466,1.14330573052231,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0.868687840005475,1.02738161275192,0.716243852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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7029 | |||
|TSSclassifier=S | |||
|UniProt=C9JVH4 | |||
|association_with_transcript=-55bp_to_ENST00000437703_5end | |||
|coexpression_cluster_id=C1534 | |||
|description=CAGE_peak_7_at_MET_5end | |||
|id=chr7:116312178..116312192,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.61e-33!254;CL:0002076!2.75e-09!43;CL:0000223!6.80e-09!59;CL:0002321!1.40e-08!248;CL:0000220!1.54e-08!246;CL:0000076!2.79e-07!62;CL:0000077!5.12e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.79e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.80e-26,253;CL:0002076,2.15e-08,42;CL:0000223,2.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.57e-12;29 | |||
|ontology_enrichment_disease=DOID:305!4.62e-19!106;DOID:0050687!5.42e-18!143;DOID:14566!1.31e-10!239;DOID:162!7.36e-10!235;DOID:299!5.72e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;2.04e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.18e-20,106;DOID:0050687,5.01e-18,143;DOID:14566,1.42e-13,239;DOID:162,1.56e-12,235;DOID:299,1.69e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.18e-13!169;UBERON:0000925!9.18e-13!169;UBERON:0006595!9.18e-13!169;UBERON:0001007!3.39e-10!155;UBERON:0001555!3.39e-10!155;UBERON:0007026!3.39e-10!155;UBERON:0000077!2.03e-09!130;UBERON:0004921!4.13e-09!129;UBERON:0004185!4.13e-09!129;UBERON:0000064!1.50e-08!219;UBERON:0000062!7.69e-08!511;UBERON:0008947!8.56e-08!38;UBERON:0003258!8.56e-08!38;UBERON:0005631!1.28e-07!14;UBERON:0000158!1.28e-07!14;UBERON:0000481!1.60e-07!347;UBERON:0000468!3.52e-07!659;UBERON:0000480!3.63e-07!626;UBERON:0000065!3.92e-07!53;UBERON:0000467!4.67e-07!625;UBERON:0001004!8.00e-07!72;UBERON:0003104!9.34e-07!238;UBERON:0009142!9.34e-07!238;UBERON:0000478!9.75e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.45e-10;24!UBERON:0001737;1.85e-10;9!UBERON:0001557;1.85e-10;9!UBERON:0000065;3.54e-09;44!UBERON:0000072;4.76e-09;37!UBERON:0005631;4.22e-07;10!UBERON:0000158;4.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,2.15e-12,38;UBERON:0003258,2.15e-12,38;UBERON:0005631,3.54e-11,14;UBERON:0000158,3.54e-11,14;UBERON:0001737,3.93e-11,9;UBERON:0004119,4.14e-11,160;UBERON:0000925,4.14e-11,160;UBERON:0006595,4.14e-11,160;UBERON:0000065,1.20e-10,54;UBERON:0000478,1.82e-10,24;UBERON:0004921,2.57e-09,118;UBERON:0000072,8.28e-09,47;UBERON:0006554,3.01e-08,47;UBERON:0001008,5.85e-08,48;UBERON:0005153,6.47e-08,37;UBERON:0001007,1.07e-07,145;UBERON:0001555,1.07e-07,145;UBERON:0007026,1.07e-07,145;UBERON:0005177,2.04e-07,101;UBERON:0003124,3.18e-07,7 | |||
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| |||
|short_description=p7@MET | |||
}} |
Revision as of 22:51, 13 September 2013
Short description: | p7@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_MET_5end |
Coexpression cluster: | C1534_gastric_signet_endometrial_pharyngeal_papillotubular_bile_squamous |
Association with transcript: | -55bp_to_ENST00000437703_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | C9JVH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.80e-26 | 253 |
endo-epithelial cell | 2.15e-08 | 42 |
endodermal cell | 2.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 2.15e-12 | 38 |
endoderm of foregut | 2.15e-12 | 38 |
extraembryonic membrane | 3.54e-11 | 14 |
membranous layer | 3.54e-11 | 14 |
larynx | 3.93e-11 | 9 |
endoderm-derived structure | 4.14e-11 | 160 |
endoderm | 4.14e-11 | 160 |
presumptive endoderm | 4.14e-11 | 160 |
respiratory tract | 1.20e-10 | 54 |
extraembryonic structure | 1.82e-10 | 24 |
subdivision of digestive tract | 2.57e-09 | 118 |
segment of respiratory tract | 8.28e-09 | 47 |
urinary system structure | 3.01e-08 | 47 |
renal system | 5.85e-08 | 48 |
epithelial bud | 6.47e-08 | 37 |
digestive system | 1.07e-07 | 145 |
digestive tract | 1.07e-07 | 145 |
primitive gut | 1.07e-07 | 145 |
trunk region element | 2.04e-07 | 101 |
chorion | 3.18e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.18e-20 | 106 |
cell type cancer | 5.01e-18 | 143 |
disease of cellular proliferation | 1.42e-13 | 239 |
cancer | 1.56e-12 | 235 |
adenocarcinoma | 1.69e-10 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.