FFCP PHASE1:Mm9::chr2:157944705..157944714,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=99|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:157944705..157944714,-|id=chr2:157944705..157944714,-|ontology_enrichment_celltype=CL:0000222!3.54e-07!7|ontology_enrichment_celltype_v019_2=CL:0002092,8.97e-44,3;CL:0002540,8.97e-44,3;CL:0002494,3.11e-20,3;CL:0000737,3.11e-20,3;CL:0000746,3.11e-20,3;CL:0000513,3.11e-20,3;CL:0000680,1.19e-10,6;CL:0000187,1.19e-10,6;CL:0000056,1.19e-10,6;CL:0000222,2.87e-09,7;CL:0000355,2.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!4.89e-10!23;UBERON:0001009!4.89e-10!23;UBERON:0004872!4.94e-09!33;UBERON:0007100!2.01e-08!18;UBERON:0000948!2.01e-08!18;UBERON:0005498!2.01e-08!18;UBERON:0004140!2.01e-08!18;UBERON:0009881!2.01e-08!18;UBERON:0004141!2.01e-08!18;UBERON:0003084!2.01e-08!18;UBERON:0007005!2.01e-08!18;UBERON:0004139!2.01e-08!18;UBERON:0004291!2.01e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.34e-12,32;UBERON:0002371,6.93e-09,16;UBERON:0001134,2.03e-07,9;UBERON:0002036,2.03e-07,9;UBERON:0002385,2.03e-07,9;UBERON:0000486,2.03e-07,9;UBERON:0007503,2.03e-07,9;UBERON:0001015,2.03e-07,9;UBERON:0002329,2.03e-07,9;UBERON:0003082,2.03e-07,9;UBERON:0003059,2.03e-07,9;UBERON:0007282,2.03e-07,9;UBERON:0004290,2.03e-07,9;UBERON:0009618,2.03e-07,9;UBERON:0000383,9.12e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.659058548203415,0,0.139986421625363,0,0,0,0,2.31533492432352,0.85960031981627,1.03134418455488,0,0,0,0,0,1.3498495759221,1.97773272513395,1.4209602298922,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,18.3592260101093,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0,0.146199987425332,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0.35613120733451,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0.750729901804728,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:157944705..157944714,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=99 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:157944705..157944714,- | |||
|id=chr2:157944705..157944714,- | |||
|ontology_enrichment_celltype=CL:0000222!3.54e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,8.97e-44,3;CL:0002540,8.97e-44,3;CL:0002494,3.11e-20,3;CL:0000737,3.11e-20,3;CL:0000746,3.11e-20,3;CL:0000513,3.11e-20,3;CL:0000680,1.19e-10,6;CL:0000187,1.19e-10,6;CL:0000056,1.19e-10,6;CL:0000222,2.87e-09,7;CL:0000355,2.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!4.89e-10!23;UBERON:0001009!4.89e-10!23;UBERON:0004872!4.94e-09!33;UBERON:0007100!2.01e-08!18;UBERON:0000948!2.01e-08!18;UBERON:0005498!2.01e-08!18;UBERON:0004140!2.01e-08!18;UBERON:0009881!2.01e-08!18;UBERON:0004141!2.01e-08!18;UBERON:0003084!2.01e-08!18;UBERON:0007005!2.01e-08!18;UBERON:0004139!2.01e-08!18;UBERON:0004291!2.01e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,9.34e-12,32;UBERON:0002371,6.93e-09,16;UBERON:0001134,2.03e-07,9;UBERON:0002036,2.03e-07,9;UBERON:0002385,2.03e-07,9;UBERON:0000486,2.03e-07,9;UBERON:0007503,2.03e-07,9;UBERON:0001015,2.03e-07,9;UBERON:0002329,2.03e-07,9;UBERON:0003082,2.03e-07,9;UBERON:0003059,2.03e-07,9;UBERON:0007282,2.03e-07,9;UBERON:0004290,2.03e-07,9;UBERON:0009618,2.03e-07,9;UBERON:0000383,9.12e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0.659058548203415,0,0.139986421625363,0,0,0,0,2.31533492432352,0.85960031981627,1.03134418455488,0,0,0,0,0,1.3498495759221,1.97773272513395,1.4209602298922,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,18.3592260101093,0,0,0,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.233530684734339,0,0,0,0.146199987425332,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.425820255624806,0.35613120733451,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0.750729901804728,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:157944705..157944714,- | |||
}} |
Revision as of 22:40, 13 September 2013
Short description: | p@chr2:157944705..157944714, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:157944705..157944714, - |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 8.97e-44 | 3 |
mesenchymal stem cell of the bone marrow | 8.97e-44 | 3 |
cardiocyte | 3.11e-20 | 3 |
striated muscle cell | 3.11e-20 | 3 |
cardiac muscle cell | 3.11e-20 | 3 |
cardiac muscle myoblast | 3.11e-20 | 3 |
muscle precursor cell | 1.19e-10 | 6 |
muscle cell | 1.19e-10 | 6 |
myoblast | 1.19e-10 | 6 |
mesodermal cell | 2.87e-09 | 7 |
multi-potent skeletal muscle stem cell | 2.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 9.34e-12 | 32 |
bone marrow | 6.93e-09 | 16 |
skeletal muscle tissue | 2.03e-07 | 9 |
striated muscle tissue | 2.03e-07 | 9 |
muscle tissue | 2.03e-07 | 9 |
multilaminar epithelium | 2.03e-07 | 9 |
epithelial vesicle | 2.03e-07 | 9 |
musculature | 2.03e-07 | 9 |
somite | 2.03e-07 | 9 |
myotome | 2.03e-07 | 9 |
presomitic mesoderm | 2.03e-07 | 9 |
presumptive segmental plate | 2.03e-07 | 9 |
dermomyotome | 2.03e-07 | 9 |
trunk paraxial mesoderm | 2.03e-07 | 9 |
musculature of body | 9.12e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.