FFCP PHASE1:Hg19::chr7:101460882..101460923,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1523|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2557|TSSclassifier=S|UniProt=P39880|association_with_transcript=0bp_to_ENST00000292535,ENST00000546411,ENST00000549414,ENST00000550008,ENST00000556210,NM_181552,uc003uyx.3_5end|description=CAGE_peak_5_at_CUX1_5end|id=chr7:101460882..101460923,+|ontology_enrichment_celltype=CL:0000860!1.30e-07!45;CL:0000094!1.92e-07!8;CL:0000766!5.94e-07!76|ontology_enrichment_celltype_v019=CL:0000349;1.64e-13;19!CL:0000094;1.66e-13;8!CL:0000775;2.41e-10;3!CL:0000081;1.36e-09;11!CL:0000771;2.31e-07;2|ontology_enrichment_celltype_v019_2=CL:0000349,1.25e-13,19;CL:0000094,1.76e-13,8;CL:0000775,2.44e-10,3;CL:0000081,1.41e-09,11;CL:0000771,2.12e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.15e-09!14;UBERON:0000158!2.15e-09!14;UBERON:0004923!1.64e-07!57;UBERON:0000478!2.04e-07!24;UBERON:0000065!6.29e-07!53;UBERON:0001557!7.54e-07!19;UBERON:0001737!9.37e-07!9|ontology_enrichment_uberon_v019=UBERON:0000478;7.60e-15;24!UBERON:0005631;3.69e-10;10!UBERON:0000158;3.69e-10;10!UBERON:0001737;3.33e-07;9!UBERON:0001557;3.33e-07;9!UBERON:0001987;7.12e-07;4!UBERON:0000305;8.07e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.13e-15,14;UBERON:0000158,2.13e-15,14;UBERON:0000478,5.17e-15,24;UBERON:0003124,1.75e-10,7;UBERON:0001557,8.83e-08,19;UBERON:0001737,4.19e-07,9;UBERON:0001987,4.63e-07,4;UBERON:0004340,4.63e-07,4;UBERON:0000305,8.90e-07,7|phase1_expression=0,0.214100523890983,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0,0.982935746006035,2.09340350391728,0.873765488520689,1.31883489114227,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.786728553697808,1.15148819429164,0.464448369948228,0,0,0.739508020333575,0.0774672005803016,0.853015394924529,0,1.10799081706375,1.00272223735071,0.651032612147555,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0,0,0,0.309706370895104,0.28769239232215,0,1.41889337933151,0.689491361473237,0,0,0.376484679085209,0.545812300115692,0.898893937780338,0.918251677112708,0.962787081228281,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.736555271975129,1.89877432464531,0.211255286311942,0,0.209658645508376,0.561643155732475,0.450530678524519,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,1.00267582127178,0.144846518960824,0,0,0,0,0,0.654895377488563,0,0,0,0,0.26591592103773,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,15.511210565933,0,0.496971951695318,0.506522046658319,2.38336525463794,1.14734648299525,0,1.68203280042692,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,1.0647612003586,1.01150814046861,1.44606617930089,1.32352767278873,0.435758888184812,0.949082476444386,0.808987848960987,1.17732879075208,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.614942192715568,0,0,0,0,0.740707561268237,0.977424915930974,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,1.04007436911366,0,0,0,0.714889968290738,13.0229185293946,1.64648067356154,0,0.355391948742546,0,1.80863626235752,1.74306691720059,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74106321552464,8.97484377612075,11.189218862773,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0,0.106727557803444,3.03127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0,1.28139149255701,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0.483437798366489,0,0.828728900423067,0.114814448164607,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,1.64007322849853,0.650756789328606,0.721287081534056,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0,0.991709492165869,0,0.255225424989168,0.910420027699949,0,0.94443704049192,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,1.01091240786658,0,0,0,0.243713489631284,0,0,0.565621727814851,1.13008116620243,1.65409603063837,0,0,0,0,0.608731130888112,0,0,0.286822704408103,2.35797698431491,0.7133421029625,0,0,0,0,0,0.384888450902048,0,0,0.941438007767792,0,0,0,0,1.01489521846434,0.764637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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1523 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2557 | |||
|TSSclassifier=S | |||
|UniProt=P39880 | |||
|association_with_transcript=0bp_to_ENST00000292535,ENST00000546411,ENST00000549414,ENST00000550008,ENST00000556210,NM_181552,uc003uyx.3_5end | |||
|description=CAGE_peak_5_at_CUX1_5end | |||
|id=chr7:101460882..101460923,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.30e-07!45;CL:0000094!1.92e-07!8;CL:0000766!5.94e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.64e-13;19!CL:0000094;1.66e-13;8!CL:0000775;2.41e-10;3!CL:0000081;1.36e-09;11!CL:0000771;2.31e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.25e-13,19;CL:0000094,1.76e-13,8;CL:0000775,2.44e-10,3;CL:0000081,1.41e-09,11;CL:0000771,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.15e-09!14;UBERON:0000158!2.15e-09!14;UBERON:0004923!1.64e-07!57;UBERON:0000478!2.04e-07!24;UBERON:0000065!6.29e-07!53;UBERON:0001557!7.54e-07!19;UBERON:0001737!9.37e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.60e-15;24!UBERON:0005631;3.69e-10;10!UBERON:0000158;3.69e-10;10!UBERON:0001737;3.33e-07;9!UBERON:0001557;3.33e-07;9!UBERON:0001987;7.12e-07;4!UBERON:0000305;8.07e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.13e-15,14;UBERON:0000158,2.13e-15,14;UBERON:0000478,5.17e-15,24;UBERON:0003124,1.75e-10,7;UBERON:0001557,8.83e-08,19;UBERON:0001737,4.19e-07,9;UBERON:0001987,4.63e-07,4;UBERON:0004340,4.63e-07,4;UBERON:0000305,8.90e-07,7 | |||
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| |||
|short_description=p5@CUX1 | |||
}} |
Revision as of 22:25, 13 September 2013
Short description: | p5@CUX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CUX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000292535, ENST00000546411, ENST00000549414, ENST00000550008, ENST00000556210, NM_181552, uc003uyx.3_5end |
EntrezGene: | CUX1 |
HGNC: | 2557 |
UniProt: | P39880 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.25e-13 | 19 |
granulocyte | 1.76e-13 | 8 |
neutrophil | 2.44e-10 | 3 |
blood cell | 1.41e-09 | 11 |
eosinophil | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.13e-15 | 14 |
membranous layer | 2.13e-15 | 14 |
extraembryonic structure | 5.17e-15 | 24 |
chorion | 1.75e-10 | 7 |
upper respiratory tract | 8.83e-08 | 19 |
larynx | 4.19e-07 | 9 |
placenta | 4.63e-07 | 4 |
allantois | 4.63e-07 | 4 |
amnion | 8.90e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.