FFCP PHASE1:Hg19::chr6:89793486..89793557,+: Difference between revisions
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{{FFCP | 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3411718232,3.49080552272302,4.2322147241232,1.48798007266701,2.77305377178851,1.29787968637137,0.126166424835079,0.437062287854782,0.633492505057185,1.01988829741982,0,0.827054095813604,1.0028301571695,4.09204970378493,2.67964130156179,0,1.75836092965222,3.19850972851471,3.57096647195611,2.97108985245628,1.61394257169231,0.560659312903067,0.891060215894309,4.44657815708082,1.95945073107265,2.05339980651169,0.740872583160463,1.5061663132462,3.32660356546013,0.0814032686109745,0.213454691755431,1.9307228228694,0.449126010532934,11.7320471201727,1.34465588601153,4.47585796147312,1.33151354837103,4.22674966541155,1.28227396921293|short_description=p3@PNRC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17278 | |||
|TSSclassifier=N | |||
|UniProt=Q9BXV2 | |||
|association_with_transcript=-194bp_to_AF279899_5end | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_3_at_PNRC1_5end | |||
|id=chr6:89793486..89793557,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.34e-26!140;CL:0002057!9.91e-24!42;CL:0000860!5.05e-22!45;CL:0002087!4.29e-20!119;CL:0000766!1.08e-19!76;CL:0002031!1.80e-19!124;CL:0002009!7.05e-17!65;CL:0000037!1.89e-16!172;CL:0000566!1.89e-16!172;CL:0002194!3.79e-16!63;CL:0000576!3.79e-16!63;CL:0000040!3.79e-16!63;CL:0000559!3.79e-16!63;CL:0000557!9.46e-16!71;CL:0000839!4.29e-15!70;CL:0002032!1.77e-14!165;CL:0000837!1.77e-14!165;CL:0000988!1.09e-13!182;CL:0000763!3.02e-10!112;CL:0000049!3.02e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.35e-22;33!CL:0002057;5.35e-22;33!CL:0000473;1.81e-16;39!CL:0000234;1.81e-16;39!CL:0000576;8.60e-14;48!CL:0000766;1.51e-10;69!CL:0002087;5.20e-08;104!CL:0000738;4.88e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.30e-29,136;CL:0000860,2.24e-28,42;CL:0002057,2.24e-28,42;CL:0000473,4.93e-26,48;CL:0000234,4.93e-26,48;CL:0002087,2.97e-22,115;CL:0000766,2.97e-21,72;CL:0002031,2.49e-20,120;CL:0000037,4.98e-19,168;CL:0002009,6.12e-19,61;CL:0002194,4.62e-18,59;CL:0000576,4.62e-18,59;CL:0000040,4.62e-18,59;CL:0000559,4.62e-18,59;CL:0000557,5.75e-17,67;CL:0002032,1.16e-16,161;CL:0000837,1.16e-16,161;CL:0000988,4.69e-16,177;CL:0000839,1.48e-15,66;CL:0000763,5.57e-12,108;CL:0000049,5.57e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.26e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.42e-16!102;UBERON:0003061!5.42e-16!102;UBERON:0002193!7.91e-16!112;UBERON:0007023!3.35e-15!115;UBERON:0002371!8.08e-13!80;UBERON:0002405!4.96e-12!115;UBERON:0001474!5.93e-11!86;UBERON:0004765!4.23e-08!101;UBERON:0001434!4.23e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.53e-17,98;UBERON:0003061,1.53e-17,98;UBERON:0002193,1.58e-16,108;UBERON:0007023,3.18e-15,114;UBERON:0002371,1.75e-14,76;UBERON:0002405,3.73e-13,93;UBERON:0001474,1.23e-12,82;UBERON:0004765,3.65e-11,90;UBERON:0001434,1.72e-09,100;UBERON:0003081,2.94e-07,203 | |||
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| |||
|short_description=p3@PNRC1 | |||
}} |
Revision as of 22:05, 13 September 2013
Short description: | p3@PNRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PNRC1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -194bp_to_AF279899_5end |
EntrezGene: | PNRC1 |
HGNC: | 17278 |
UniProt: | Q9BXV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.30e-29 | 136 |
classical monocyte | 2.24e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.24e-28 | 42 |
defensive cell | 4.93e-26 | 48 |
phagocyte | 4.93e-26 | 48 |
nongranular leukocyte | 2.97e-22 | 115 |
myeloid leukocyte | 2.97e-21 | 72 |
hematopoietic lineage restricted progenitor cell | 2.49e-20 | 120 |
hematopoietic stem cell | 4.98e-19 | 168 |
macrophage dendritic cell progenitor | 6.12e-19 | 61 |
monopoietic cell | 4.62e-18 | 59 |
monocyte | 4.62e-18 | 59 |
monoblast | 4.62e-18 | 59 |
promonocyte | 4.62e-18 | 59 |
granulocyte monocyte progenitor cell | 5.75e-17 | 67 |
hematopoietic oligopotent progenitor cell | 1.16e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-16 | 161 |
hematopoietic cell | 4.69e-16 | 177 |
myeloid lineage restricted progenitor cell | 1.48e-15 | 66 |
myeloid cell | 5.57e-12 | 108 |
common myeloid progenitor | 5.57e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.53e-17 | 98 |
blood island | 1.53e-17 | 98 |
hemolymphoid system | 1.58e-16 | 108 |
adult organism | 3.18e-15 | 114 |
bone marrow | 1.75e-14 | 76 |
immune system | 3.73e-13 | 93 |
bone element | 1.23e-12 | 82 |
skeletal element | 3.65e-11 | 90 |
skeletal system | 1.72e-09 | 100 |
lateral plate mesoderm | 2.94e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.