FFCP PHASE1:Mm9::chr2:126906205..126906233,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109778|HGNC=|MCL_coexpression_id=11|UniProt=|association_with_transcript=-20bp_to_uc008mer.1_5end|description=CAGE_peak_2_at_Blvra_5end|id=chr2:126906205..126906233,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.84e-15!14;UBERON:0003918!1.84e-15!14;UBERON:0005095!1.84e-15!14;UBERON:0007687!1.84e-15!14;UBERON:0006554!3.07e-13!16;UBERON:0001008!2.51e-12!17;UBERON:0000489!1.22e-11!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.42e-36,14;UBERON:0003918,3.42e-36,14;UBERON:0011143,3.42e-36,14;UBERON:0005095,3.42e-36,14;UBERON:0007687,3.42e-36,14;UBERON:0006554,4.38e-28,18;UBERON:0001008,1.37e-26,19;UBERON:0000489,5.03e-24,21;UBERON:0003103,1.67e-11,43;UBERON:0005172,4.99e-10,49;UBERON:0005173,4.99e-10,49;UBERON:0002417,4.99e-10,49;UBERON:0000916,4.99e-10,49;UBERON:0003104,6.11e-08,61;UBERON:0009142,6.11e-08,61;UBERON:0009569,2.72e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.456994050438915,1.1270773567308,2.44381593414377,6.40043207653165,2.52488951605147,4.42655759869801,9.59465961867414,11.7749045881031,15.1778511623815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p2@Blvra}} | ||
|EntrezGene=109778 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_uc008mer.1_5end | |||
|description=CAGE_peak_2_at_Blvra_5end | |||
|id=chr2:126906205..126906233,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.84e-15!14;UBERON:0003918!1.84e-15!14;UBERON:0005095!1.84e-15!14;UBERON:0007687!1.84e-15!14;UBERON:0006554!3.07e-13!16;UBERON:0001008!2.51e-12!17;UBERON:0000489!1.22e-11!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.42e-36,14;UBERON:0003918,3.42e-36,14;UBERON:0011143,3.42e-36,14;UBERON:0005095,3.42e-36,14;UBERON:0007687,3.42e-36,14;UBERON:0006554,4.38e-28,18;UBERON:0001008,1.37e-26,19;UBERON:0000489,5.03e-24,21;UBERON:0003103,1.67e-11,43;UBERON:0005172,4.99e-10,49;UBERON:0005173,4.99e-10,49;UBERON:0002417,4.99e-10,49;UBERON:0000916,4.99e-10,49;UBERON:0003104,6.11e-08,61;UBERON:0009142,6.11e-08,61;UBERON:0009569,2.72e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.456994050438915,1.1270773567308,2.44381593414377,6.40043207653165,2.52488951605147,4.42655759869801,9.59465961867414,11.7749045881031,15.1778511623815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Blvra | |||
}} |
Revision as of 21:58, 13 September 2013
Short description: | p2@Blvra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Blvra_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -20bp_to_uc008mer.1_5end |
EntrezGene: | Blvra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.42e-36 | 14 |
kidney mesenchyme | 3.42e-36 | 14 |
upper urinary tract | 3.42e-36 | 14 |
kidney rudiment | 3.42e-36 | 14 |
kidney field | 3.42e-36 | 14 |
urinary system structure | 4.38e-28 | 18 |
renal system | 1.37e-26 | 19 |
cavitated compound organ | 5.03e-24 | 21 |
compound organ | 1.67e-11 | 43 |
abdomen element | 4.99e-10 | 49 |
abdominal segment element | 4.99e-10 | 49 |
abdominal segment of trunk | 4.99e-10 | 49 |
abdomen | 4.99e-10 | 49 |
mesenchyme | 6.11e-08 | 61 |
entire embryonic mesenchyme | 6.11e-08 | 61 |
subdivision of trunk | 2.72e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.