FFCP PHASE1:Hg19::chr6:75787895..75787900,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1280|description=CAGE_peak_at_chr6:75787895..75787900,-|id=chr6:75787895..75787900,-|ontology_enrichment_celltype=CL:0000057!2.38e-14!75;CL:0002620!3.49e-13!23;CL:0000055!3.01e-12!180;CL:0000136!9.25e-07!15|ontology_enrichment_celltype_v019=CL:0002620;4.51e-16;23!CL:0000136;4.30e-14;13!CL:0002580;1.83e-10;3!CL:0002615;3.55e-10;3!CL:0002579;1.61e-09;3!CL:0000135;2.00e-09;3!CL:0000388;2.00e-09;3!CL:0002334;9.70e-09;12!CL:0000197;4.89e-08;6!CL:0000098;4.89e-08;6!CL:0002167;4.89e-08;6!CL:0002617;1.47e-07;2|ontology_enrichment_celltype_v019_2=CL:0000136,1.09e-18,15;CL:0002620,4.51e-16,23;CL:0000057,3.35e-13,76;CL:0002580,1.84e-10,3;CL:0002615,3.62e-10,3;CL:0002579,1.76e-09,3;CL:0000135,2.22e-09,3;CL:0000388,2.22e-09,3;CL:0002334,1.01e-08,12;CL:0000197,4.46e-08,6;CL:0000098,4.46e-08,6;CL:0002167,4.46e-08,6;CL:0002617,1.47e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.48e-09;5!DOID:450;1.48e-09;5!DOID:66;1.48e-09;5!DOID:423;1.48e-09;5!DOID:0080000;1.48e-09;5!DOID:11722;1.48e-09;5!DOID:3307;1.32e-07;2|ontology_enrichment_disease_v019_2=DOID:17,1.55e-09,5;DOID:450,1.55e-09,5;DOID:66,1.55e-09,5;DOID:423,1.55e-09,5;DOID:0080000,1.55e-09,5;DOID:11722,1.55e-09,5;DOID:3307,1.26e-07,2|ontology_enrichment_uberon=UBERON:0003688!1.12e-07!6;UBERON:0002358!1.12e-07!6;UBERON:0003684!1.12e-07!6;UBERON:0001178!1.12e-07!6;UBERON:0002097!6.01e-07!40|ontology_enrichment_uberon_v019=UBERON:0003688;5.60e-18;6!UBERON:0002358;5.60e-18;6!UBERON:0003684;5.60e-18;6!UBERON:0001178;5.60e-18;6!UBERON:0004457;9.08e-16;9!UBERON:0000042;9.08e-16;9!UBERON:0007846;2.00e-09;3!UBERON:0000043;2.00e-09;3!UBERON:0007845;2.00e-09;3!UBERON:0000310;6.21e-08;10!UBERON:0001443;3.61e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.25e-18,6;UBERON:0002358,6.25e-18,6;UBERON:0003684,6.25e-18,6;UBERON:0001178,6.25e-18,6;UBERON:0004457,1.74e-11,12;UBERON:0000042,1.74e-11,12;UBERON:0007846,2.22e-09,3;UBERON:0000043,2.22e-09,3;UBERON:0007845,2.22e-09,3;UBERON:0000310,6.23e-08,10;UBERON:0002097,7.81e-08,41;UBERON:0001443,3.62e-07,11|phase1_expression=7.99384868790449,9.42042305120326,2.39622486963151,11.0080628188443,5.36353313312745,7.85104671690332,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,0,1.88300474649071,0,2.91980922181582,0.472674085820339,0.221729397462564,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.933382937297,0,0.264818361626438,0.860509862246441,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.421352420106746,0.204154171254893,0.859840221182376,0,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.500474079487857,0,0.877955241761676,0.30648779579902,0.300476117813194,0,8.61070251306537,2.34913127700424,1.69545520927649,0.900273288253207,1.13357782162283,12.6243864622358,2.04728541964749,4.55696097051419,1.75386609290158,8.58274832429989,2.39329736469978,1.2931684545505,5.68015348026583,0.503760491138201,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0.441175890929576,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0,3.95144636908534,1.24900292158013,2.52323864054295,2.57711112983969,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,3.96972492510043,22.098524153481,8.41980283299221,1.15325234330131,2.55853624533352,6.4341568457443,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915694648183434,0.41254749960294,0,0,1.6068392984416,0,0.462145851343933,0.307007349452259,0.413509717453592,0.322260734604821,1.59518363305651,0,0.267096106940212,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.539617372749944,2.19629623788844,0.942499218765491,0,0,0,0,0.243713489631284,0,0.136499911407986,0.989838023675989,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.633322905892992,2.30506425071931,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1280 | |||
|description=CAGE_peak_at_chr6:75787895..75787900,- | |||
|id=chr6:75787895..75787900,- | |||
|ontology_enrichment_celltype=CL:0000057!2.38e-14!75;CL:0002620!3.49e-13!23;CL:0000055!3.01e-12!180;CL:0000136!9.25e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.51e-16;23!CL:0000136;4.30e-14;13!CL:0002580;1.83e-10;3!CL:0002615;3.55e-10;3!CL:0002579;1.61e-09;3!CL:0000135;2.00e-09;3!CL:0000388;2.00e-09;3!CL:0002334;9.70e-09;12!CL:0000197;4.89e-08;6!CL:0000098;4.89e-08;6!CL:0002167;4.89e-08;6!CL:0002617;1.47e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.09e-18,15;CL:0002620,4.51e-16,23;CL:0000057,3.35e-13,76;CL:0002580,1.84e-10,3;CL:0002615,3.62e-10,3;CL:0002579,1.76e-09,3;CL:0000135,2.22e-09,3;CL:0000388,2.22e-09,3;CL:0002334,1.01e-08,12;CL:0000197,4.46e-08,6;CL:0000098,4.46e-08,6;CL:0002167,4.46e-08,6;CL:0002617,1.47e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.48e-09;5!DOID:450;1.48e-09;5!DOID:66;1.48e-09;5!DOID:423;1.48e-09;5!DOID:0080000;1.48e-09;5!DOID:11722;1.48e-09;5!DOID:3307;1.32e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.55e-09,5;DOID:450,1.55e-09,5;DOID:66,1.55e-09,5;DOID:423,1.55e-09,5;DOID:0080000,1.55e-09,5;DOID:11722,1.55e-09,5;DOID:3307,1.26e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.12e-07!6;UBERON:0002358!1.12e-07!6;UBERON:0003684!1.12e-07!6;UBERON:0001178!1.12e-07!6;UBERON:0002097!6.01e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.60e-18;6!UBERON:0002358;5.60e-18;6!UBERON:0003684;5.60e-18;6!UBERON:0001178;5.60e-18;6!UBERON:0004457;9.08e-16;9!UBERON:0000042;9.08e-16;9!UBERON:0007846;2.00e-09;3!UBERON:0000043;2.00e-09;3!UBERON:0007845;2.00e-09;3!UBERON:0000310;6.21e-08;10!UBERON:0001443;3.61e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.25e-18,6;UBERON:0002358,6.25e-18,6;UBERON:0003684,6.25e-18,6;UBERON:0001178,6.25e-18,6;UBERON:0004457,1.74e-11,12;UBERON:0000042,1.74e-11,12;UBERON:0007846,2.22e-09,3;UBERON:0000043,2.22e-09,3;UBERON:0007845,2.22e-09,3;UBERON:0000310,6.23e-08,10;UBERON:0002097,7.81e-08,41;UBERON:0001443,3.62e-07,11 | |||
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| |||
|short_description=p@chr6:75787895..75787900,- | |||
}} |
Revision as of 21:49, 13 September 2013
Short description: | p@chr6:75787895..75787900, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:75787895..75787900, - |
Coexpression cluster: | C1280_Preadipocyte_Fibroblast_Adipocyte_leiomyoblastoma_Ewing_Chondrocyte_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.09e-18 | 15 |
skin fibroblast | 4.51e-16 | 23 |
fibroblast | 3.35e-13 | 76 |
preadipocyte of the breast | 1.84e-10 | 3 |
adipocyte of omentum tissue | 3.62e-10 | 3 |
omentum preadipocyte | 1.76e-09 | 3 |
fibrocyte | 2.22e-09 | 3 |
tendon cell | 2.22e-09 | 3 |
preadipocyte | 1.01e-08 | 12 |
receptor cell | 4.46e-08 | 6 |
sensory epithelial cell | 4.46e-08 | 6 |
olfactory epithelial cell | 4.46e-08 | 6 |
adipocyte of breast | 1.47e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.25e-18 | 6 |
peritoneum | 6.25e-18 | 6 |
abdominal cavity | 6.25e-18 | 6 |
visceral peritoneum | 6.25e-18 | 6 |
cavity lining | 1.74e-11 | 12 |
serous membrane | 1.74e-11 | 12 |
dense regular connective tissue | 2.22e-09 | 3 |
tendon | 2.22e-09 | 3 |
regular connective tissue | 2.22e-09 | 3 |
breast | 6.23e-08 | 10 |
skin of body | 7.81e-08 | 41 |
chest | 3.62e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.55e-09 | 5 |
myotonic disease | 1.55e-09 | 5 |
muscle tissue disease | 1.55e-09 | 5 |
myopathy | 1.55e-09 | 5 |
muscular disease | 1.55e-09 | 5 |
myotonic dystrophy | 1.55e-09 | 5 |
teratoma | 1.26e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.