FFCP PHASE1:Mm9::chr1:84846575..84846589,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=46|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:84846575..84846589,-|id=chr1:84846575..84846589,-|ontology_enrichment_celltype=CL:0000349!6.21e-10!3;CL:0000351!6.21e-10!3|ontology_enrichment_celltype_v019_2=CL:0000349,2.45e-43,3;CL:0000351,2.45e-43,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!3.40e-10!3;UBERON:0000478!3.40e-10!3;UBERON:0000158!3.40e-10!3;UBERON:0000358!6.21e-10!3;UBERON:0000307!6.21e-10!3;UBERON:0005795!1.57e-07!4;UBERON:0000995!1.57e-07!4;UBERON:0001987!2.63e-07!2;UBERON:0003124!2.63e-07!2;UBERON:0004340!2.63e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.18e-44,3;UBERON:0000478,1.18e-44,3;UBERON:0000158,1.18e-44,3;UBERON:0000358,2.45e-43,3;UBERON:0000307,2.45e-43,3;UBERON:0007010,2.45e-43,3;UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0000305,3.44e-16,1;UBERON:0005795,1.13e-15,4;UBERON:0000995,1.13e-15,4;UBERON:0003975,9.46e-13,5;UBERON:0003134,2.44e-08,8;UBERON:0004175,1.63e-07,9;UBERON:0000474,1.63e-07,9|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,59.8211821917185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.560226862867,12.0744280392378,0,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,1.99787358036658,1.70456327558004,5.37230772365051,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:84846575..84846589,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:84846575..84846589,- | |||
|id=chr1:84846575..84846589,- | |||
|ontology_enrichment_celltype=CL:0000349!6.21e-10!3;CL:0000351!6.21e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.45e-43,3;CL:0000351,2.45e-43,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.40e-10!3;UBERON:0000478!3.40e-10!3;UBERON:0000158!3.40e-10!3;UBERON:0000358!6.21e-10!3;UBERON:0000307!6.21e-10!3;UBERON:0005795!1.57e-07!4;UBERON:0000995!1.57e-07!4;UBERON:0001987!2.63e-07!2;UBERON:0003124!2.63e-07!2;UBERON:0004340!2.63e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.18e-44,3;UBERON:0000478,1.18e-44,3;UBERON:0000158,1.18e-44,3;UBERON:0000358,2.45e-43,3;UBERON:0000307,2.45e-43,3;UBERON:0007010,2.45e-43,3;UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0000305,3.44e-16,1;UBERON:0005795,1.13e-15,4;UBERON:0000995,1.13e-15,4;UBERON:0003975,9.46e-13,5;UBERON:0003134,2.44e-08,8;UBERON:0004175,1.63e-07,9;UBERON:0000474,1.63e-07,9 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,59.8211821917185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.560226862867,12.0744280392378,0,0.16488625294148,0,0,0,0,0,0,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,1.99787358036658,1.70456327558004,5.37230772365051,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:84846575..84846589,- | |||
}} |
Revision as of 21:06, 13 September 2013
Short description: | p@chr1:84846575..84846589, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:84846575..84846589, - |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.45e-43 | 3 |
trophoblast cell | 2.45e-43 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.18e-44 | 3 |
extraembryonic structure | 1.18e-44 | 3 |
membranous layer | 1.18e-44 | 3 |
blastocyst | 2.45e-43 | 3 |
blastula | 2.45e-43 | 3 |
cleaving embryo | 2.45e-43 | 3 |
placenta | 3.41e-30 | 2 |
chorion | 3.41e-30 | 2 |
allantois | 3.41e-30 | 2 |
amnion | 3.44e-16 | 1 |
embryonic uterus | 1.13e-15 | 4 |
uterus | 1.13e-15 | 4 |
internal female genitalia | 9.46e-13 | 5 |
female reproductive organ | 2.44e-08 | 8 |
internal genitalia | 1.63e-07 | 9 |
female reproductive system | 1.63e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.