FFCP PHASE1:Mm9::chr1:173090774..173090783,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=560|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:173090774..173090783,+|id=chr1:173090774..173090783,+|ontology_enrichment_celltype=CL:0000630!3.54e-11!3;CL:0002611!9.06e-09!2;CL:0000325!8.21e-08!2;CL:0000217!8.21e-08!2;CL:0000328!8.21e-08!2;CL:0002573!8.21e-08!2;CL:0002376!8.21e-08!2;CL:0000218!8.21e-08!2;CL:0000692!8.21e-08!2;CL:0002377!8.21e-08!2;CL:0002375!8.21e-08!2|ontology_enrichment_celltype_v019_2=CL:0002611,1.66e-44,2;CL:0000117,2.04e-09,23;CL:0000337,2.04e-09,23;CL:0002612,1.88e-08,3;CL:0000540,8.22e-07,33;CL:0000047,8.22e-07,33;CL:0000031,8.22e-07,33;CL:0000404,8.22e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!1.51e-15!6;UBERON:0005174!1.51e-15!6;UBERON:0001137!1.51e-15!6;UBERON:0001948!1.61e-12!5;UBERON:0002315!1.61e-12!5;UBERON:0002256!9.06e-09!2;UBERON:0003076!1.28e-07!12;UBERON:0003057!1.28e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002256,1.66e-44,2;UBERON:0001948,9.85e-40,5;UBERON:0002315,9.85e-40,5;UBERON:0002240,2.62e-33,6;UBERON:0005174,2.62e-33,6;UBERON:0001137,2.62e-33,6;UBERON:0003076,3.40e-17,12;UBERON:0003057,3.40e-17,12;UBERON:0000489,3.13e-10,21;UBERON:0002257,1.88e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57085885963423,3.75476519617743,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,1.56608848879013,0,0.757261933331841,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,1.62307484934295|short_description=p@chr1:173090774..173090783,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=560 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:173090774..173090783,+ | |||
|id=chr1:173090774..173090783,+ | |||
|ontology_enrichment_celltype=CL:0000630!3.54e-11!3;CL:0002611!9.06e-09!2;CL:0000325!8.21e-08!2;CL:0000217!8.21e-08!2;CL:0000328!8.21e-08!2;CL:0002573!8.21e-08!2;CL:0002376!8.21e-08!2;CL:0000218!8.21e-08!2;CL:0000692!8.21e-08!2;CL:0002377!8.21e-08!2;CL:0002375!8.21e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,1.66e-44,2;CL:0000117,2.04e-09,23;CL:0000337,2.04e-09,23;CL:0002612,1.88e-08,3;CL:0000540,8.22e-07,33;CL:0000047,8.22e-07,33;CL:0000031,8.22e-07,33;CL:0000404,8.22e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.51e-15!6;UBERON:0005174!1.51e-15!6;UBERON:0001137!1.51e-15!6;UBERON:0001948!1.61e-12!5;UBERON:0002315!1.61e-12!5;UBERON:0002256!9.06e-09!2;UBERON:0003076!1.28e-07!12;UBERON:0003057!1.28e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002256,1.66e-44,2;UBERON:0001948,9.85e-40,5;UBERON:0002315,9.85e-40,5;UBERON:0002240,2.62e-33,6;UBERON:0005174,2.62e-33,6;UBERON:0001137,2.62e-33,6;UBERON:0003076,3.40e-17,12;UBERON:0003057,3.40e-17,12;UBERON:0000489,3.13e-10,21;UBERON:0002257,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57085885963423,3.75476519617743,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,1.56608848879013,0,0.757261933331841,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,1.62307484934295 | |||
|short_description=p@chr1:173090774..173090783,+ | |||
}} |
Revision as of 19:39, 13 September 2013
Short description: | p@chr1:173090774..173090783, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173090774..173090783, + |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 1.66e-44 | 2 |
CNS neuron (sensu Vertebrata) | 2.04e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.04e-09 | 23 |
neuron of the ventral spinal cord | 1.88e-08 | 3 |
neuron | 8.22e-07 | 33 |
neuronal stem cell | 8.22e-07 | 33 |
neuroblast | 8.22e-07 | 33 |
electrically signaling cell | 8.22e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
dorsal horn of spinal cord | 1.66e-44 | 2 |
regional part of spinal cord | 9.85e-40 | 5 |
gray matter of spinal cord | 9.85e-40 | 5 |
spinal cord | 2.62e-33 | 6 |
dorsal region element | 2.62e-33 | 6 |
dorsum | 2.62e-33 | 6 |
posterior neural tube | 3.40e-17 | 12 |
chordal neural plate | 3.40e-17 | 12 |
cavitated compound organ | 3.13e-10 | 21 |
ventral horn of spinal cord | 1.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.