FFCP PHASE1:Mm9::chr1:173090487..173090490,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=560|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:173090487..173090490,+|id=chr1:173090487..173090490,+|ontology_enrichment_celltype=CL:0000630!7.86e-23!3;CL:0002611!2.90e-16!2;CL:0000325!1.35e-15!2;CL:0000217!1.35e-15!2;CL:0000328!1.35e-15!2;CL:0002573!1.35e-15!2;CL:0002376!1.35e-15!2;CL:0000218!1.35e-15!2;CL:0000692!1.35e-15!2;CL:0002377!1.35e-15!2;CL:0002375!1.35e-15!2;CL:0002612!9.09e-11!3;CL:0000215!1.02e-10!3;CL:0000710!6.23e-09!1;CL:0002077!6.23e-09!1;CL:0005014!6.23e-09!1;CL:0002315!6.23e-09!1;CL:0002490!6.23e-09!1;CL:0000221!7.04e-08!44;CL:0000133!7.04e-08!44|ontology_enrichment_celltype_v019_2=CL:0002611,5.75e-23,2;CL:0000217,9.50e-23,2;CL:0000328,9.50e-23,2;CL:0002573,9.50e-23,2;CL:0002376,9.50e-23,2;CL:0000218,9.50e-23,2;CL:0000692,9.50e-23,2;CL:0002377,9.50e-23,2;CL:0002375,9.50e-23,2;CL:0000215,1.12e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001948!2.84e-24!5;UBERON:0002315!2.84e-24!5;UBERON:0002240!2.69e-20!6;UBERON:0005174!2.69e-20!6;UBERON:0001137!2.69e-20!6;UBERON:0002256!2.90e-16!2;UBERON:0002257!9.09e-11!3;UBERON:0003076!2.61e-10!12;UBERON:0003057!2.61e-10!12;UBERON:0001374!8.81e-09!1;UBERON:0001630!8.81e-09!1;UBERON:0004252!8.81e-09!1;UBERON:0003663!8.81e-09!1;UBERON:0001383!8.81e-09!1;UBERON:0005090!8.81e-09!1;UBERON:0003661!8.81e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0002256,5.75e-23,2;UBERON:0001948,4.56e-10,5;UBERON:0002315,4.56e-10,5;UBERON:0002240,1.29e-08,6;UBERON:0005174,1.29e-08,6;UBERON:0001137,1.29e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,1.76694832761291,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.427115042397309,0,1.13589289999776,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr1:173090487..173090490,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=560 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:173090487..173090490,+ | |||
|id=chr1:173090487..173090490,+ | |||
|ontology_enrichment_celltype=CL:0000630!7.86e-23!3;CL:0002611!2.90e-16!2;CL:0000325!1.35e-15!2;CL:0000217!1.35e-15!2;CL:0000328!1.35e-15!2;CL:0002573!1.35e-15!2;CL:0002376!1.35e-15!2;CL:0000218!1.35e-15!2;CL:0000692!1.35e-15!2;CL:0002377!1.35e-15!2;CL:0002375!1.35e-15!2;CL:0002612!9.09e-11!3;CL:0000215!1.02e-10!3;CL:0000710!6.23e-09!1;CL:0002077!6.23e-09!1;CL:0005014!6.23e-09!1;CL:0002315!6.23e-09!1;CL:0002490!6.23e-09!1;CL:0000221!7.04e-08!44;CL:0000133!7.04e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,5.75e-23,2;CL:0000217,9.50e-23,2;CL:0000328,9.50e-23,2;CL:0002573,9.50e-23,2;CL:0002376,9.50e-23,2;CL:0000218,9.50e-23,2;CL:0000692,9.50e-23,2;CL:0002377,9.50e-23,2;CL:0002375,9.50e-23,2;CL:0000215,1.12e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!2.84e-24!5;UBERON:0002315!2.84e-24!5;UBERON:0002240!2.69e-20!6;UBERON:0005174!2.69e-20!6;UBERON:0001137!2.69e-20!6;UBERON:0002256!2.90e-16!2;UBERON:0002257!9.09e-11!3;UBERON:0003076!2.61e-10!12;UBERON:0003057!2.61e-10!12;UBERON:0001374!8.81e-09!1;UBERON:0001630!8.81e-09!1;UBERON:0004252!8.81e-09!1;UBERON:0003663!8.81e-09!1;UBERON:0001383!8.81e-09!1;UBERON:0005090!8.81e-09!1;UBERON:0003661!8.81e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002256,5.75e-23,2;UBERON:0001948,4.56e-10,5;UBERON:0002315,4.56e-10,5;UBERON:0002240,1.29e-08,6;UBERON:0005174,1.29e-08,6;UBERON:0001137,1.29e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,1.76694832761291,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.427115042397309,0,1.13589289999776,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr1:173090487..173090490,+ | |||
}} |
Revision as of 19:39, 13 September 2013
Short description: | p@chr1:173090487..173090490, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173090487..173090490, + |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 5.75e-23 | 2 |
insulating cell | 9.50e-23 | 2 |
myelin accumulating cell | 9.50e-23 | 2 |
Schwann cell | 9.50e-23 | 2 |
non-myelinating Schwann cell | 9.50e-23 | 2 |
myelinating Schwann cell;;Schwann cell | 9.50e-23 | 2 |
terminal Schwann cell | 9.50e-23 | 2 |
immature Schwann cell | 9.50e-23 | 2 |
Schwann cell precursor | 9.50e-23 | 2 |
barrier cell | 1.12e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
dorsal horn of spinal cord | 5.75e-23 | 2 |
regional part of spinal cord | 4.56e-10 | 5 |
gray matter of spinal cord | 4.56e-10 | 5 |
spinal cord | 1.29e-08 | 6 |
dorsal region element | 1.29e-08 | 6 |
dorsum | 1.29e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.