FFCP PHASE1:Mm9::chr1:17087879..17087887,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=57339|HGNC=|MCL_coexpression_id=14|UniProt=Q9ET80|association_with_transcript=0bp_to_ENSMUST00000038382,uc007aka.1_5end|description=CAGE_peak_3_at_Jph1_5end|id=chr1:17087879..17087887,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.29e-08,5;UBERON:0002472,7.29e-08,5;UBERON:0008784,7.29e-08,5;UBERON:0006058,7.29e-08,5;UBERON:0004709,7.29e-08,5;UBERON:0002529,7.29e-08,5;UBERON:0010538,7.29e-08,5;UBERON:0005420,7.29e-08,5;UBERON:0010758,7.29e-08,5;UBERON:0000978,7.29e-08,5;UBERON:0002103,7.29e-08,5;UBERON:0000376,7.29e-08,5;UBERON:0000154,7.29e-08,5;UBERON:0010709,7.29e-08,5;UBERON:0005730,7.29e-08,5|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,1.82577746171277,0,0,0,1.26759077799012,0,0,0,0,0.506719730950197,0,0.5709193985953,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.494389935468748,0,0.884610551949874,2.75003644910596,3.75430581382669,2.42437626567611,0,1.75668478206928,3.35114730901528,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.407357455401265,0.870848794270651,0.252722758433675,1.05220927943237,0.130120442962704,0,0.360124259610698,0.60281927134286,1.97305847538851,1.40925092313335,1.12442069471675,0.776110112217047,0.431135985865684,0.378212160335639,0,0.219195732427575,0.556094498451196,1.39300866608867,0.205782136407943,0,0,0,0,0.621377317606506,0,0,0.473489471170421,0.393528463494808,0.462801338662135,0.465067889500816,1.87791380979733,1.75148013550754,1.97471819896177,0.656669856316381,1.70244500046297,2.04679982395465,0.878200461164203,2.14730270016595,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0,0,0.605050573870028,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0,0.670025029767263,0,0.390267295715598,1.10344600874334,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.35163505977661,0,16.915552122693,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,2.4732937941222,0.807322133479528,0.663442174209714,0.358117032009409,0.164140899745061,0.291480836629851,1.66882771809459,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.524296722128554,0,2.01621004380506,0,0.608175645870493,0.205421914329655,0.649604114888975,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,4.98806843953465,0,0.0897138566094757,0,0.965947970160952,0,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.31136204275253,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,1.23621034343337,1.28367683836726,1.01078884705519,0.50695859978048,1.13175804831646,0.936415074698824,1.08842759088278,1.37845125493472,0.952587382566147,1.62238056322798,1.15745532278223,0.412085900803307,0.883193520806384,0.685738504770831,1.06485483695602,0.715308569841963,1.59881058295561,0.941093804153306,1.01537529470012,1.09756783723664,1.57841826862706,1.35804113845862,0.561142271657738,1.06771516311757,2.36410757701352,2.04615521584845,2.01417893541756,0.964533054905707,0,0.935726433781634,1.50409737833809,3.06061331310149,1.98532277207564,3.2461496986859|short_description=p3@Jph1}} | ||
|EntrezGene=57339 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|UniProt=Q9ET80 | |||
|association_with_transcript=0bp_to_ENSMUST00000038382,uc007aka.1_5end | |||
|description=CAGE_peak_3_at_Jph1_5end | |||
|id=chr1:17087879..17087887,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.29e-08,5;UBERON:0002472,7.29e-08,5;UBERON:0008784,7.29e-08,5;UBERON:0006058,7.29e-08,5;UBERON:0004709,7.29e-08,5;UBERON:0002529,7.29e-08,5;UBERON:0010538,7.29e-08,5;UBERON:0005420,7.29e-08,5;UBERON:0010758,7.29e-08,5;UBERON:0000978,7.29e-08,5;UBERON:0002103,7.29e-08,5;UBERON:0000376,7.29e-08,5;UBERON:0000154,7.29e-08,5;UBERON:0010709,7.29e-08,5;UBERON:0005730,7.29e-08,5 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,1.82577746171277,0,0,0,1.26759077799012,0,0,0,0,0.506719730950197,0,0.5709193985953,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.494389935468748,0,0.884610551949874,2.75003644910596,3.75430581382669,2.42437626567611,0,1.75668478206928,3.35114730901528,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.407357455401265,0.870848794270651,0.252722758433675,1.05220927943237,0.130120442962704,0,0.360124259610698,0.60281927134286,1.97305847538851,1.40925092313335,1.12442069471675,0.776110112217047,0.431135985865684,0.378212160335639,0,0.219195732427575,0.556094498451196,1.39300866608867,0.205782136407943,0,0,0,0,0.621377317606506,0,0,0.473489471170421,0.393528463494808,0.462801338662135,0.465067889500816,1.87791380979733,1.75148013550754,1.97471819896177,0.656669856316381,1.70244500046297,2.04679982395465,0.878200461164203,2.14730270016595,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0,0,0.605050573870028,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0,0.670025029767263,0,0.390267295715598,1.10344600874334,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.35163505977661,0,16.915552122693,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0.178065603667255,0.488660878060728,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,2.4732937941222,0.807322133479528,0.663442174209714,0.358117032009409,0.164140899745061,0.291480836629851,1.66882771809459,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.524296722128554,0,2.01621004380506,0,0.608175645870493,0.205421914329655,0.649604114888975,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.233753804363138,4.98806843953465,0,0.0897138566094757,0,0.965947970160952,0,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.31136204275253,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,1.23621034343337,1.28367683836726,1.01078884705519,0.50695859978048,1.13175804831646,0.936415074698824,1.08842759088278,1.37845125493472,0.952587382566147,1.62238056322798,1.15745532278223,0.412085900803307,0.883193520806384,0.685738504770831,1.06485483695602,0.715308569841963,1.59881058295561,0.941093804153306,1.01537529470012,1.09756783723664,1.57841826862706,1.35804113845862,0.561142271657738,1.06771516311757,2.36410757701352,2.04615521584845,2.01417893541756,0.964533054905707,0,0.935726433781634,1.50409737833809,3.06061331310149,1.98532277207564,3.2461496986859 | |||
|short_description=p3@Jph1 | |||
}} |
Revision as of 19:36, 13 September 2013
Short description: | p3@Jph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Jph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | 0bp_to_ENSMUST00000038382, uc007aka.1_5end |
EntrezGene: | Jph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 7.29e-08 | 5 |
stylopod | 7.29e-08 | 5 |
lower limb segment | 7.29e-08 | 5 |
multi-limb segment region | 7.29e-08 | 5 |
pelvic appendage | 7.29e-08 | 5 |
limb segment | 7.29e-08 | 5 |
paired limb/fin segment | 7.29e-08 | 5 |
pelvic appendage bud | 7.29e-08 | 5 |
subdivision of organism along appendicular axis | 7.29e-08 | 5 |
leg | 7.29e-08 | 5 |
hindlimb | 7.29e-08 | 5 |
hindlimb stylopod | 7.29e-08 | 5 |
posterior region of body | 7.29e-08 | 5 |
pelvic complex | 7.29e-08 | 5 |
hindlimb/pelvic fin field | 7.29e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.