FFCP PHASE1:Mm9::chr1:157005814..157005831,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58244|HGNC=|MCL_coexpression_id=482|UniProt=Q9JKK1|association_with_transcript=-1bp_to_ENSMUST00000027743,ENSMUST00000111779,NM_021433,uc007dbb.1_5end|description=CAGE_peak_2_at_Stx6_5end|id=chr1:157005814..157005831,+|ontology_enrichment_celltype=CL:0000117!1.56e-13!23;CL:0000337!1.56e-13!23;CL:0000540!3.65e-08!33;CL:0000047!3.65e-08!33;CL:0000031!3.65e-08!33;CL:0000404!3.65e-08!33;CL:0000221!9.01e-08!44;CL:0000133!9.01e-08!44;CL:0002319!9.62e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-13,23;CL:0000337,1.35e-13,23;CL:0000540,4.28e-08,33;CL:0000047,4.28e-08,33;CL:0000031,4.28e-08,33;CL:0000404,4.28e-08,33;CL:0000221,1.13e-07,44;CL:0000133,1.13e-07,44;CL:0002319,1.21e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!4.01e-24!94;UBERON:0007811!1.12e-23!86;UBERON:0000064!1.98e-17!99;UBERON:0002020!2.58e-17!34;UBERON:0001049!2.61e-17!52;UBERON:0005068!2.61e-17!52;UBERON:0006241!2.61e-17!52;UBERON:0007135!2.61e-17!52;UBERON:0000073!1.30e-16!75;UBERON:0001016!1.30e-16!75;UBERON:0001017!2.45e-16!73;UBERON:0005743!2.45e-16!73;UBERON:0000955!2.10e-15!50;UBERON:0006238!2.10e-15!50;UBERON:0003080!3.34e-15!40;UBERON:0000033!3.98e-15!63;UBERON:0002616!5.46e-15!49;UBERON:0002780!8.51e-15!39;UBERON:0001890!8.51e-15!39;UBERON:0006240!8.51e-15!39;UBERON:0004121!8.94e-15!102;UBERON:0000924!8.94e-15!102;UBERON:0006601!8.94e-15!102;UBERON:0002791!1.61e-14!29;UBERON:0003528!1.61e-14!29;UBERON:0001893!1.61e-14!29;UBERON:0003056!4.32e-14!49;UBERON:0002346!8.34e-13!71;UBERON:0003075!8.34e-13!71;UBERON:0007284!8.34e-13!71;UBERON:0000956!5.14e-10!21;UBERON:0001869!5.14e-10!21;UBERON:0000203!5.14e-10!21;UBERON:0000072!1.56e-08!27;UBERON:0006562!3.12e-08!24;UBERON:0001557!3.12e-08!24;UBERON:0001042!3.12e-08!24;UBERON:0008814!3.12e-08!24;UBERON:0009145!3.12e-08!24;UBERON:0002370!3.48e-08!23;UBERON:0000974!3.48e-08!23;UBERON:0004807!3.48e-08!23;UBERON:0005058!3.48e-08!23;UBERON:0003351!3.48e-08!23;UBERON:0009113!3.48e-08!23;UBERON:0003295!3.48e-08!23;UBERON:0009722!3.48e-08!23;UBERON:0005562!3.48e-08!23;UBERON:0007690!3.48e-08!23;UBERON:0003408!4.31e-08!24;UBERON:0002619!9.38e-08!17;UBERON:0000063!3.20e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.07e-18,54;UBERON:0002020,2.13e-17,34;UBERON:0001049,2.48e-17,52;UBERON:0005068,2.48e-17,52;UBERON:0006241,2.48e-17,52;UBERON:0007135,2.48e-17,52;UBERON:0004121,5.14e-17,95;UBERON:0000924,5.14e-17,95;UBERON:0006601,5.14e-17,95;UBERON:0001016,1.57e-16,75;UBERON:0010371,1.92e-16,73;UBERON:0001017,2.97e-16,73;UBERON:0002346,1.30e-15,64;UBERON:0003075,1.30e-15,64;UBERON:0007284,1.30e-15,64;UBERON:0003080,2.83e-15,40;UBERON:0002780,7.25e-15,39;UBERON:0001890,7.25e-15,39;UBERON:0006240,7.25e-15,39;UBERON:0000955,9.26e-15,47;UBERON:0006238,9.26e-15,47;UBERON:0003528,1.38e-14,29;UBERON:0002791,1.38e-14,29;UBERON:0001893,1.38e-14,29;UBERON:0002616,2.40e-14,46;UBERON:0003056,4.09e-14,49;UBERON:0000956,4.64e-10,21;UBERON:0001869,4.64e-10,21;UBERON:0000203,4.64e-10,21;UBERON:0000153,1.22e-08,43;UBERON:0000072,1.43e-08,27;UBERON:0010314,2.48e-08,92;UBERON:0006562,2.88e-08,24;UBERON:0001557,2.88e-08,24;UBERON:0001042,2.88e-08,24;UBERON:0008814,2.88e-08,24;UBERON:0009145,2.88e-08,24;UBERON:0002370,3.21e-08,23;UBERON:0000974,3.21e-08,23;UBERON:0004807,3.21e-08,23;UBERON:0005058,3.21e-08,23;UBERON:0003351,3.21e-08,23;UBERON:0009113,3.21e-08,23;UBERON:0003295,3.21e-08,23;UBERON:0009722,3.21e-08,23;UBERON:0005562,3.21e-08,23;UBERON:0007690,3.21e-08,23;UBERON:0003408,3.98e-08,24;UBERON:0002619,8.70e-08,17;UBERON:0007811,1.00e-07,36;UBERON:0000119,4.84e-07,176|phase1_expression=4.16387002472464,5.58360652222978,3.63999391511629,3.32710632437513,4.50806156951712,3.3575854382378,1.63528848416868,4.39019299701359,3.09735188733667,3.97909694747389,8.38968044304974,6.1424562426409,4.10881751834894,3.93391810885488,0.333109761815663,1.01237633694913,2.09868563438444,3.3123527362615,1.91960207048034,1.69755860719212,2.38121212422995,1.68794617041505,3.39559725880616,1.11994695955385,2.52350209173887,4.59385571292016,2.58457197695445,2.58565479223067,1.71021077510736,0.756090389279792,3.32595765982957,1.27006134691926,1.84519436275371,0,4.04392267651784,2.1610503896604,2.24586291888606,2.09265815368454,3.1253413780952,2.09409497589519,4.70585190424811,3.41522742479223,4.36959317728038,0.755380907853464,0.506884656097573,1.10128051297009,0.782391344348039,2.39827672018491,1.75748946187577,3.30530828426282,2.51975558925653,2.87505128729943,3.6912173332702,7.97898356212479,6.72187598284928,1.28629718017973,1.14613375975503,2.06268836910977,10.1158230429799,5.28990979272033,8.87363964908651,3.38844532069132,3.55717918444456,4.04954872776629,1.97773272513395,4.2628806896766,2.39680088414724,3.07374644257244,13.9980976616445,10.3954572515402,12.6194976810829,7.14127461009509,7.06779331045163,10.656699531701,14.6643570657902,14.7075005857603,2.20231761998777,4.59674417106676,4.45458946443106,8.83638127792299,12.3508318863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| ||
|EntrezGene=58244 | |||
|HGNC= | |||
|MCL_coexpression_id=482 | |||
|UniProt=Q9JKK1 | |||
|association_with_transcript=-1bp_to_ENSMUST00000027743,ENSMUST00000111779,NM_021433,uc007dbb.1_5end | |||
|description=CAGE_peak_2_at_Stx6_5end | |||
|id=chr1:157005814..157005831,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.56e-13!23;CL:0000337!1.56e-13!23;CL:0000540!3.65e-08!33;CL:0000047!3.65e-08!33;CL:0000031!3.65e-08!33;CL:0000404!3.65e-08!33;CL:0000221!9.01e-08!44;CL:0000133!9.01e-08!44;CL:0002319!9.62e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-13,23;CL:0000337,1.35e-13,23;CL:0000540,4.28e-08,33;CL:0000047,4.28e-08,33;CL:0000031,4.28e-08,33;CL:0000404,4.28e-08,33;CL:0000221,1.13e-07,44;CL:0000133,1.13e-07,44;CL:0002319,1.21e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.01e-24!94;UBERON:0007811!1.12e-23!86;UBERON:0000064!1.98e-17!99;UBERON:0002020!2.58e-17!34;UBERON:0001049!2.61e-17!52;UBERON:0005068!2.61e-17!52;UBERON:0006241!2.61e-17!52;UBERON:0007135!2.61e-17!52;UBERON:0000073!1.30e-16!75;UBERON:0001016!1.30e-16!75;UBERON:0001017!2.45e-16!73;UBERON:0005743!2.45e-16!73;UBERON:0000955!2.10e-15!50;UBERON:0006238!2.10e-15!50;UBERON:0003080!3.34e-15!40;UBERON:0000033!3.98e-15!63;UBERON:0002616!5.46e-15!49;UBERON:0002780!8.51e-15!39;UBERON:0001890!8.51e-15!39;UBERON:0006240!8.51e-15!39;UBERON:0004121!8.94e-15!102;UBERON:0000924!8.94e-15!102;UBERON:0006601!8.94e-15!102;UBERON:0002791!1.61e-14!29;UBERON:0003528!1.61e-14!29;UBERON:0001893!1.61e-14!29;UBERON:0003056!4.32e-14!49;UBERON:0002346!8.34e-13!71;UBERON:0003075!8.34e-13!71;UBERON:0007284!8.34e-13!71;UBERON:0000956!5.14e-10!21;UBERON:0001869!5.14e-10!21;UBERON:0000203!5.14e-10!21;UBERON:0000072!1.56e-08!27;UBERON:0006562!3.12e-08!24;UBERON:0001557!3.12e-08!24;UBERON:0001042!3.12e-08!24;UBERON:0008814!3.12e-08!24;UBERON:0009145!3.12e-08!24;UBERON:0002370!3.48e-08!23;UBERON:0000974!3.48e-08!23;UBERON:0004807!3.48e-08!23;UBERON:0005058!3.48e-08!23;UBERON:0003351!3.48e-08!23;UBERON:0009113!3.48e-08!23;UBERON:0003295!3.48e-08!23;UBERON:0009722!3.48e-08!23;UBERON:0005562!3.48e-08!23;UBERON:0007690!3.48e-08!23;UBERON:0003408!4.31e-08!24;UBERON:0002619!9.38e-08!17;UBERON:0000063!3.20e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.07e-18,54;UBERON:0002020,2.13e-17,34;UBERON:0001049,2.48e-17,52;UBERON:0005068,2.48e-17,52;UBERON:0006241,2.48e-17,52;UBERON:0007135,2.48e-17,52;UBERON:0004121,5.14e-17,95;UBERON:0000924,5.14e-17,95;UBERON:0006601,5.14e-17,95;UBERON:0001016,1.57e-16,75;UBERON:0010371,1.92e-16,73;UBERON:0001017,2.97e-16,73;UBERON:0002346,1.30e-15,64;UBERON:0003075,1.30e-15,64;UBERON:0007284,1.30e-15,64;UBERON:0003080,2.83e-15,40;UBERON:0002780,7.25e-15,39;UBERON:0001890,7.25e-15,39;UBERON:0006240,7.25e-15,39;UBERON:0000955,9.26e-15,47;UBERON:0006238,9.26e-15,47;UBERON:0003528,1.38e-14,29;UBERON:0002791,1.38e-14,29;UBERON:0001893,1.38e-14,29;UBERON:0002616,2.40e-14,46;UBERON:0003056,4.09e-14,49;UBERON:0000956,4.64e-10,21;UBERON:0001869,4.64e-10,21;UBERON:0000203,4.64e-10,21;UBERON:0000153,1.22e-08,43;UBERON:0000072,1.43e-08,27;UBERON:0010314,2.48e-08,92;UBERON:0006562,2.88e-08,24;UBERON:0001557,2.88e-08,24;UBERON:0001042,2.88e-08,24;UBERON:0008814,2.88e-08,24;UBERON:0009145,2.88e-08,24;UBERON:0002370,3.21e-08,23;UBERON:0000974,3.21e-08,23;UBERON:0004807,3.21e-08,23;UBERON:0005058,3.21e-08,23;UBERON:0003351,3.21e-08,23;UBERON:0009113,3.21e-08,23;UBERON:0003295,3.21e-08,23;UBERON:0009722,3.21e-08,23;UBERON:0005562,3.21e-08,23;UBERON:0007690,3.21e-08,23;UBERON:0003408,3.98e-08,24;UBERON:0002619,8.70e-08,17;UBERON:0007811,1.00e-07,36;UBERON:0000119,4.84e-07,176 | |||
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| |||
|short_description=p2@Stx6 | |||
}} |
Revision as of 19:18, 13 September 2013
Short description: | p2@Stx6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stx6_5end |
Coexpression cluster: | MCL_coexpression_mm9:482 |
Association with transcript: | -1bp_to_ENSMUST00000027743, ENSMUST00000111779, NM_021433, uc007dbb.1_5end |
EntrezGene: | Stx6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.35e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-13 | 23 |
neuron | 4.28e-08 | 33 |
neuronal stem cell | 4.28e-08 | 33 |
neuroblast | 4.28e-08 | 33 |
electrically signaling cell | 4.28e-08 | 33 |
ectodermal cell | 1.13e-07 | 44 |
neurectodermal cell | 1.13e-07 | 44 |
neural cell | 1.21e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.