FFCP PHASE1:Mm9::chr1:156902102..156902145,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:156902102..156902145,+|id=chr1:156902102..156902145,+|ontology_enrichment_celltype=CL:0000988!1.74e-16!32;CL:0002032!1.74e-16!32;CL:0000037!1.74e-16!32;CL:0000566!1.74e-16!32;CL:0000837!1.74e-16!32;CL:0000049!4.92e-15!19;CL:0000553!2.68e-13!6;CL:0000556!2.68e-13!6;CL:0002320!4.19e-13!46;CL:0000134!4.19e-13!46;CL:0000219!6.97e-11!54;CL:0000050!6.50e-09!9;CL:0002031!6.77e-09!25;CL:0000063!1.48e-08!66;CL:0000763!1.92e-07!16;CL:0000034!2.10e-07!97;CL:0000414!2.61e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.27e-26,6;CL:0000556,1.27e-26,6;CL:0000050,4.50e-18,9;CL:0000839,8.73e-13,13;CL:0002031,9.10e-12,25;CL:0000763,1.53e-10,16;CL:0000988,2.45e-09,32;CL:0002032,2.45e-09,32;CL:0000037,2.45e-09,32;CL:0000837,2.45e-09,32;CL:0000049,5.31e-09,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.19e-13!46;UBERON:0002371!1.92e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-10,16;UBERON:0001474,7.09e-08,22;UBERON:0004765,7.09e-08,22;UBERON:0001434,7.09e-08,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.26184866143295,1.09691546884591,1.69755860719212,0,0.794327609607082,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8821854733646,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:156902102..156902145,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:156902102..156902145,+ | |||
|id=chr1:156902102..156902145,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.74e-16!32;CL:0002032!1.74e-16!32;CL:0000037!1.74e-16!32;CL:0000566!1.74e-16!32;CL:0000837!1.74e-16!32;CL:0000049!4.92e-15!19;CL:0000553!2.68e-13!6;CL:0000556!2.68e-13!6;CL:0002320!4.19e-13!46;CL:0000134!4.19e-13!46;CL:0000219!6.97e-11!54;CL:0000050!6.50e-09!9;CL:0002031!6.77e-09!25;CL:0000063!1.48e-08!66;CL:0000763!1.92e-07!16;CL:0000034!2.10e-07!97;CL:0000414!2.61e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.27e-26,6;CL:0000556,1.27e-26,6;CL:0000050,4.50e-18,9;CL:0000839,8.73e-13,13;CL:0002031,9.10e-12,25;CL:0000763,1.53e-10,16;CL:0000988,2.45e-09,32;CL:0002032,2.45e-09,32;CL:0000037,2.45e-09,32;CL:0000837,2.45e-09,32;CL:0000049,5.31e-09,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.19e-13!46;UBERON:0002371!1.92e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-10,16;UBERON:0001474,7.09e-08,22;UBERON:0004765,7.09e-08,22;UBERON:0001434,7.09e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,1.26184866143295,1.09691546884591,1.69755860719212,0,0.794327609607082,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8821854733646,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:156902102..156902145,+ | |||
}} |
Revision as of 19:18, 13 September 2013
Short description: | p@chr1:156902102..156902145, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:156902102..156902145, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.27e-26 | 6 |
megakaryocyte | 1.27e-26 | 6 |
megakaryocyte-erythroid progenitor cell | 4.50e-18 | 9 |
myeloid lineage restricted progenitor cell | 8.73e-13 | 13 |
hematopoietic lineage restricted progenitor cell | 9.10e-12 | 25 |
myeloid cell | 1.53e-10 | 16 |
hematopoietic cell | 2.45e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.45e-09 | 32 |
hematopoietic stem cell | 2.45e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.45e-09 | 32 |
common myeloid progenitor | 5.31e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-10 | 16 |
bone element | 7.09e-08 | 22 |
skeletal element | 7.09e-08 | 22 |
skeletal system | 7.09e-08 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.