FFCP PHASE1:Mm9::chr1:14921327..14921333,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:14921327..14921333,-|id=chr1:14921327..14921333,-|ontology_enrichment_celltype=CL:0002563!2.99e-08!9;CL:0002251!2.99e-08!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.45e-24!43;UBERON:0005409!2.07e-18!59;UBERON:0000344!7.50e-15!15;UBERON:0001242!2.01e-10!13;UBERON:0000060!2.01e-10!13;UBERON:0001262!2.01e-10!13;UBERON:0004786!2.01e-10!13;UBERON:0001007!9.27e-09!128;UBERON:0001555!9.27e-09!128;UBERON:0007026!9.27e-09!128;UBERON:0004923!1.10e-08!24;UBERON:0004119!1.51e-08!130;UBERON:0000925!1.51e-08!130;UBERON:0006595!1.51e-08!130;UBERON:0003350!2.99e-08!9;UBERON:0004808!2.99e-08!9;UBERON:0001277!2.99e-08!9;UBERON:0001962!3.27e-07!2;UBERON:0001961!3.27e-07!2;UBERON:0001744!3.27e-07!2;UBERON:0004921!5.13e-07!126;UBERON:0004185!5.13e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.64e-28,31;UBERON:0005409,3.61e-18,47;UBERON:0001962,2.26e-13,2;UBERON:0001961,2.26e-13,2;UBERON:0001744,2.26e-13,2;UBERON:0000344,1.46e-10,15;UBERON:0001007,2.68e-09,116;UBERON:0001555,2.68e-09,116;UBERON:0007026,2.68e-09,116;UBERON:0002465,3.19e-09,3;UBERON:0004119,4.08e-09,118;UBERON:0000925,4.08e-09,118;UBERON:0006595,4.08e-09,118;UBERON:0003199,2.74e-07,1|phase1_expression=0,0,0,0.30246421130683,0,4.53274034162102,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,1.14704640533585,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.05780226665418,0,0,0,0,0.444756087689741,0.380451252225118,8.0669940462567,0.823494773620054,1.75934646160189,2.38747766449381,0.974820435595601,4.49409704327111,2.59365659849633,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:14921327..14921333,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:14921327..14921333,- | |||
|id=chr1:14921327..14921333,- | |||
|ontology_enrichment_celltype=CL:0002563!2.99e-08!9;CL:0002251!2.99e-08!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.45e-24!43;UBERON:0005409!2.07e-18!59;UBERON:0000344!7.50e-15!15;UBERON:0001242!2.01e-10!13;UBERON:0000060!2.01e-10!13;UBERON:0001262!2.01e-10!13;UBERON:0004786!2.01e-10!13;UBERON:0001007!9.27e-09!128;UBERON:0001555!9.27e-09!128;UBERON:0007026!9.27e-09!128;UBERON:0004923!1.10e-08!24;UBERON:0004119!1.51e-08!130;UBERON:0000925!1.51e-08!130;UBERON:0006595!1.51e-08!130;UBERON:0003350!2.99e-08!9;UBERON:0004808!2.99e-08!9;UBERON:0001277!2.99e-08!9;UBERON:0001962!3.27e-07!2;UBERON:0001961!3.27e-07!2;UBERON:0001744!3.27e-07!2;UBERON:0004921!5.13e-07!126;UBERON:0004185!5.13e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.64e-28,31;UBERON:0005409,3.61e-18,47;UBERON:0001962,2.26e-13,2;UBERON:0001961,2.26e-13,2;UBERON:0001744,2.26e-13,2;UBERON:0000344,1.46e-10,15;UBERON:0001007,2.68e-09,116;UBERON:0001555,2.68e-09,116;UBERON:0007026,2.68e-09,116;UBERON:0002465,3.19e-09,3;UBERON:0004119,4.08e-09,118;UBERON:0000925,4.08e-09,118;UBERON:0006595,4.08e-09,118;UBERON:0003199,2.74e-07,1 | |||
|phase1_expression=0,0,0,0.30246421130683,0,4.53274034162102,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,1.14704640533585,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0.831173226792462,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.05780226665418,0,0,0,0,0.444756087689741,0.380451252225118,8.0669940462567,0.823494773620054,1.75934646160189,2.38747766449381,0.974820435595601,4.49409704327111,2.59365659849633,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:14921327..14921333,- | |||
}} |
Revision as of 19:11, 13 September 2013
Short description: | p@chr1:14921327..14921333, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:14921327..14921333, - |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.64e-28 | 31 |
gastrointestinal system | 3.61e-18 | 47 |
gut-associated lymphoid tissue | 2.26e-13 | 2 |
mucosa-associated lymphoid tissue | 2.26e-13 | 2 |
lymphoid tissue | 2.26e-13 | 2 |
mucosa | 1.46e-10 | 15 |
digestive system | 2.68e-09 | 116 |
digestive tract | 2.68e-09 | 116 |
primitive gut | 2.68e-09 | 116 |
lymphoid system | 3.19e-09 | 3 |
endoderm-derived structure | 4.08e-09 | 118 |
endoderm | 4.08e-09 | 118 |
presumptive endoderm | 4.08e-09 | 118 |
egg chamber | 2.74e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.