FFCP PHASE1:Mm9::chr1:141273671..141273687,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170788|HGNC=|MCL_coexpression_id=53|UniProt=B7ZC61,B7ZC62|association_with_transcript=0bp_to_ENSMUST00000131586,ENSMUST00000145244_5end|description=CAGE_peak_4_at_Crb1_5end|id=chr1:141273671..141273687,-|ontology_enrichment_celltype=CL:0000117!9.67e-13!23;CL:0000337!9.67e-13!23;CL:0000540!6.30e-11!33;CL:0000047!6.30e-11!33;CL:0000031!6.30e-11!33;CL:0000404!6.30e-11!33;CL:0000221!1.81e-08!44;CL:0000133!1.81e-08!44;CL:0000393!4.66e-08!39;CL:0000211!4.66e-08!39;CL:0002319!5.72e-08!43|ontology_enrichment_celltype_v019_2=CL:0002614,3.89e-07,3;CL:0002613,5.15e-07,3;CL:0000117,7.67e-07,23;CL:0000337,7.67e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.71e-19!71;UBERON:0003075!4.71e-19!71;UBERON:0007284!4.71e-19!71;UBERON:0000033!5.03e-18!63;UBERON:0003056!1.41e-17!49;UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0001017!1.81e-14!73;UBERON:0005743!1.81e-14!73;UBERON:0000073!1.09e-13!75;UBERON:0001016!1.09e-13!75;UBERON:0001049!1.90e-13!52;UBERON:0005068!1.90e-13!52;UBERON:0006241!1.90e-13!52;UBERON:0007135!1.90e-13!52;UBERON:0000955!6.83e-12!50;UBERON:0006238!6.83e-12!50;UBERON:0002616!2.23e-11!49;UBERON:0007811!1.85e-10!86;UBERON:0003080!2.09e-10!40;UBERON:0000970!7.92e-10!9;UBERON:0000019!7.92e-10!9;UBERON:0000047!7.92e-10!9;UBERON:0004088!7.92e-10!9;UBERON:0002104!7.92e-10!9;UBERON:0001456!7.92e-10!9;UBERON:0003072!7.92e-10!9;UBERON:0003071!7.92e-10!9;UBERON:0004128!7.92e-10!9;UBERON:0002780!1.09e-09!39;UBERON:0001890!1.09e-09!39;UBERON:0006240!1.09e-09!39;UBERON:0000153!5.70e-09!94;UBERON:0000020!4.18e-08!12;UBERON:0001032!4.18e-08!12;UBERON:0004456!4.18e-08!12;UBERON:0002420!7.64e-08!8;UBERON:0007245!7.64e-08!8;UBERON:0010009!7.64e-08!8;UBERON:0010011!7.64e-08!8;UBERON:0000454!7.64e-08!8;UBERON:0002020!1.51e-07!34;UBERON:0001444!1.74e-07!11;UBERON:0005085!3.16e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.63e-19,9;UBERON:0000019,2.63e-19,9;UBERON:0000047,2.63e-19,9;UBERON:0010312,2.63e-19,9;UBERON:0004088,2.63e-19,9;UBERON:0002104,2.63e-19,9;UBERON:0001456,2.63e-19,9;UBERON:0003072,2.63e-19,9;UBERON:0004128,2.63e-19,9;UBERON:0003071,2.63e-19,9;UBERON:0003056,8.49e-17,49;UBERON:0001444,1.02e-15,11;UBERON:0000020,2.26e-14,12;UBERON:0001032,2.26e-14,12;UBERON:0004456,2.26e-14,12;UBERON:0000033,3.13e-13,13;UBERON:0005085,3.13e-13,13;UBERON:0002346,2.39e-12,64;UBERON:0003075,2.39e-12,64;UBERON:0007284,2.39e-12,64;UBERON:0002950,7.62e-11,4;UBERON:0001891,7.62e-11,4;UBERON:0009616,7.62e-11,4;UBERON:0010286,7.62e-11,4;UBERON:0010371,1.50e-10,73;UBERON:0002420,1.82e-09,8;UBERON:0007245,1.82e-09,8;UBERON:0010009,1.82e-09,8;UBERON:0010011,1.82e-09,8;UBERON:0000454,1.82e-09,8;UBERON:0004121,6.81e-09,95;UBERON:0000924,6.81e-09,95;UBERON:0006601,6.81e-09,95;UBERON:0010314,6.64e-08,92;UBERON:0002038,3.89e-07,3;UBERON:0009663,3.89e-07,3;UBERON:0009661,3.89e-07,3;UBERON:0000125,3.89e-07,3;UBERON:0002308,3.89e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.489963196859816,0.287536413054709,1.83843757322004,0,1.14918604276669,0.614426133024974,1.71452174049252,1.09785172322892,0.52091337055676,1.95428099300967,1.12552522006336,0.45839474333043,0.294628585473668,0.142371680799103,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.04853447583376,0.457500602818626,0.251308704225729,0,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0.420883711772948,0.520481771850815,0.689706313300419,1.62055916824814,3.91832526372859,4.08218994907967,3.20284300712124,2.43624483855295,3.3631438196072,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0.660837565967596,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.775809948670503,0.49095073923223,0.885311519739602,0.295220295959204,1.09899109488962,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,1.13163047853539,0,0.614870295887855,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,1.05418608574999,6.18813259489121,2.7235168460303,0.36012218806262,0.388076051348264,0.428674070063185,0.709360934569094,0.535106452806212,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,1.03552062350364,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.384150914429216,0.229741875822453,0,0,0,0,0,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p4@Crb1}} | ||
|EntrezGene=170788 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|UniProt=B7ZC61,B7ZC62 | |||
|association_with_transcript=0bp_to_ENSMUST00000131586,ENSMUST00000145244_5end | |||
|description=CAGE_peak_4_at_Crb1_5end | |||
|id=chr1:141273671..141273687,- | |||
|ontology_enrichment_celltype=CL:0000117!9.67e-13!23;CL:0000337!9.67e-13!23;CL:0000540!6.30e-11!33;CL:0000047!6.30e-11!33;CL:0000031!6.30e-11!33;CL:0000404!6.30e-11!33;CL:0000221!1.81e-08!44;CL:0000133!1.81e-08!44;CL:0000393!4.66e-08!39;CL:0000211!4.66e-08!39;CL:0002319!5.72e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,3.89e-07,3;CL:0002613,5.15e-07,3;CL:0000117,7.67e-07,23;CL:0000337,7.67e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.71e-19!71;UBERON:0003075!4.71e-19!71;UBERON:0007284!4.71e-19!71;UBERON:0000033!5.03e-18!63;UBERON:0003056!1.41e-17!49;UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0001017!1.81e-14!73;UBERON:0005743!1.81e-14!73;UBERON:0000073!1.09e-13!75;UBERON:0001016!1.09e-13!75;UBERON:0001049!1.90e-13!52;UBERON:0005068!1.90e-13!52;UBERON:0006241!1.90e-13!52;UBERON:0007135!1.90e-13!52;UBERON:0000955!6.83e-12!50;UBERON:0006238!6.83e-12!50;UBERON:0002616!2.23e-11!49;UBERON:0007811!1.85e-10!86;UBERON:0003080!2.09e-10!40;UBERON:0000970!7.92e-10!9;UBERON:0000019!7.92e-10!9;UBERON:0000047!7.92e-10!9;UBERON:0004088!7.92e-10!9;UBERON:0002104!7.92e-10!9;UBERON:0001456!7.92e-10!9;UBERON:0003072!7.92e-10!9;UBERON:0003071!7.92e-10!9;UBERON:0004128!7.92e-10!9;UBERON:0002780!1.09e-09!39;UBERON:0001890!1.09e-09!39;UBERON:0006240!1.09e-09!39;UBERON:0000153!5.70e-09!94;UBERON:0000020!4.18e-08!12;UBERON:0001032!4.18e-08!12;UBERON:0004456!4.18e-08!12;UBERON:0002420!7.64e-08!8;UBERON:0007245!7.64e-08!8;UBERON:0010009!7.64e-08!8;UBERON:0010011!7.64e-08!8;UBERON:0000454!7.64e-08!8;UBERON:0002020!1.51e-07!34;UBERON:0001444!1.74e-07!11;UBERON:0005085!3.16e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.63e-19,9;UBERON:0000019,2.63e-19,9;UBERON:0000047,2.63e-19,9;UBERON:0010312,2.63e-19,9;UBERON:0004088,2.63e-19,9;UBERON:0002104,2.63e-19,9;UBERON:0001456,2.63e-19,9;UBERON:0003072,2.63e-19,9;UBERON:0004128,2.63e-19,9;UBERON:0003071,2.63e-19,9;UBERON:0003056,8.49e-17,49;UBERON:0001444,1.02e-15,11;UBERON:0000020,2.26e-14,12;UBERON:0001032,2.26e-14,12;UBERON:0004456,2.26e-14,12;UBERON:0000033,3.13e-13,13;UBERON:0005085,3.13e-13,13;UBERON:0002346,2.39e-12,64;UBERON:0003075,2.39e-12,64;UBERON:0007284,2.39e-12,64;UBERON:0002950,7.62e-11,4;UBERON:0001891,7.62e-11,4;UBERON:0009616,7.62e-11,4;UBERON:0010286,7.62e-11,4;UBERON:0010371,1.50e-10,73;UBERON:0002420,1.82e-09,8;UBERON:0007245,1.82e-09,8;UBERON:0010009,1.82e-09,8;UBERON:0010011,1.82e-09,8;UBERON:0000454,1.82e-09,8;UBERON:0004121,6.81e-09,95;UBERON:0000924,6.81e-09,95;UBERON:0006601,6.81e-09,95;UBERON:0010314,6.64e-08,92;UBERON:0002038,3.89e-07,3;UBERON:0009663,3.89e-07,3;UBERON:0009661,3.89e-07,3;UBERON:0000125,3.89e-07,3;UBERON:0002308,3.89e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.285650984403804,0.441737081903227,0.489963196859816,0.287536413054709,1.83843757322004,0,1.14918604276669,0.614426133024974,1.71452174049252,1.09785172322892,0.52091337055676,1.95428099300967,1.12552522006336,0.45839474333043,0.294628585473668,0.142371680799103,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.04853447583376,0.457500602818626,0.251308704225729,0,0.255715457330331,0.62336413367868,0.162241263067758,0,0,0,0.420883711772948,0.520481771850815,0.689706313300419,1.62055916824814,3.91832526372859,4.08218994907967,3.20284300712124,2.43624483855295,3.3631438196072,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0.660837565967596,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.775809948670503,0.49095073923223,0.885311519739602,0.295220295959204,1.09899109488962,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,1.13163047853539,0,0.614870295887855,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,1.05418608574999,6.18813259489121,2.7235168460303,0.36012218806262,0.388076051348264,0.428674070063185,0.709360934569094,0.535106452806212,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,1.03552062350364,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.384150914429216,0.229741875822453,0,0,0,0,0,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p4@Crb1 | |||
}} |
Revision as of 19:09, 13 September 2013
Short description: | p4@Crb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Crb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 0bp_to_ENSMUST00000131586, ENSMUST00000145244_5end |
EntrezGene: | Crb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 3.89e-07 | 3 |
striatum neuron | 5.15e-07 | 3 |
CNS neuron (sensu Vertebrata) | 7.67e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.67e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.