FFCP PHASE1:Mm9::chr1:135803531..135803537,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269120|HGNC=|MCL_coexpression_id=16|UniProt=Q920A0|association_with_transcript=212bp_to_ENSMUST00000010455_5end|description=CAGE_peak_3_at_Optc_5end|id=chr1:135803531..135803537,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!3.65e-23!9;UBERON:0000019!3.65e-23!9;UBERON:0000047!3.65e-23!9;UBERON:0004088!3.65e-23!9;UBERON:0002104!3.65e-23!9;UBERON:0001456!3.65e-23!9;UBERON:0003072!3.65e-23!9;UBERON:0003071!3.65e-23!9;UBERON:0004128!3.65e-23!9;UBERON:0001444!9.98e-19!11;UBERON:0000020!4.61e-17!12;UBERON:0001032!4.61e-17!12;UBERON:0004456!4.61e-17!12;UBERON:0005085!1.18e-15!13;UBERON:0002346!3.65e-13!71;UBERON:0003075!3.65e-13!71;UBERON:0007284!3.65e-13!71;UBERON:0003056!1.60e-12!49;UBERON:0004121!1.61e-11!102;UBERON:0000924!1.61e-11!102;UBERON:0006601!1.61e-11!102;UBERON:0000007!1.24e-10!8;UBERON:0003296!1.24e-10!8;UBERON:0010133!1.24e-10!8;UBERON:0000033!1.77e-10!63;UBERON:0001894!1.93e-08!10;UBERON:0006222!1.93e-08!10;UBERON:0007811!8.40e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.84e-30,9;UBERON:0000019,8.84e-30,9;UBERON:0000047,8.84e-30,9;UBERON:0010312,8.84e-30,9;UBERON:0004088,8.84e-30,9;UBERON:0002104,8.84e-30,9;UBERON:0001456,8.84e-30,9;UBERON:0003072,8.84e-30,9;UBERON:0004128,8.84e-30,9;UBERON:0003071,8.84e-30,9;UBERON:0001444,1.34e-24,11;UBERON:0000020,1.18e-22,12;UBERON:0001032,1.18e-22,12;UBERON:0004456,1.18e-22,12;UBERON:0000033,5.26e-21,13;UBERON:0005085,5.26e-21,13;UBERON:0007811,2.78e-08,36;UBERON:0000153,4.30e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.360124259610698,0.60281927134286,1.08858398642125,0.512454881139399,1.40552586839593,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.857348140126369,0.532020700926821,0.891844088010353,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p3@Optc}} | ||
|EntrezGene=269120 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|UniProt=Q920A0 | |||
|association_with_transcript=212bp_to_ENSMUST00000010455_5end | |||
|description=CAGE_peak_3_at_Optc_5end | |||
|id=chr1:135803531..135803537,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.65e-23!9;UBERON:0000019!3.65e-23!9;UBERON:0000047!3.65e-23!9;UBERON:0004088!3.65e-23!9;UBERON:0002104!3.65e-23!9;UBERON:0001456!3.65e-23!9;UBERON:0003072!3.65e-23!9;UBERON:0003071!3.65e-23!9;UBERON:0004128!3.65e-23!9;UBERON:0001444!9.98e-19!11;UBERON:0000020!4.61e-17!12;UBERON:0001032!4.61e-17!12;UBERON:0004456!4.61e-17!12;UBERON:0005085!1.18e-15!13;UBERON:0002346!3.65e-13!71;UBERON:0003075!3.65e-13!71;UBERON:0007284!3.65e-13!71;UBERON:0003056!1.60e-12!49;UBERON:0004121!1.61e-11!102;UBERON:0000924!1.61e-11!102;UBERON:0006601!1.61e-11!102;UBERON:0000007!1.24e-10!8;UBERON:0003296!1.24e-10!8;UBERON:0010133!1.24e-10!8;UBERON:0000033!1.77e-10!63;UBERON:0001894!1.93e-08!10;UBERON:0006222!1.93e-08!10;UBERON:0007811!8.40e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.84e-30,9;UBERON:0000019,8.84e-30,9;UBERON:0000047,8.84e-30,9;UBERON:0010312,8.84e-30,9;UBERON:0004088,8.84e-30,9;UBERON:0002104,8.84e-30,9;UBERON:0001456,8.84e-30,9;UBERON:0003072,8.84e-30,9;UBERON:0004128,8.84e-30,9;UBERON:0003071,8.84e-30,9;UBERON:0001444,1.34e-24,11;UBERON:0000020,1.18e-22,12;UBERON:0001032,1.18e-22,12;UBERON:0004456,1.18e-22,12;UBERON:0000033,5.26e-21,13;UBERON:0005085,5.26e-21,13;UBERON:0007811,2.78e-08,36;UBERON:0000153,4.30e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.360124259610698,0.60281927134286,1.08858398642125,0.512454881139399,1.40552586839593,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.857348140126369,0.532020700926821,0.891844088010353,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Optc | |||
}} |
Revision as of 18:54, 13 September 2013
Short description: | p3@Optc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Optc_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 212bp_to_ENSMUST00000010455_5end |
EntrezGene: | Optc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 8.84e-30 | 9 |
camera-type eye | 8.84e-30 | 9 |
simple eye | 8.84e-30 | 9 |
immature eye | 8.84e-30 | 9 |
ocular region | 8.84e-30 | 9 |
visual system | 8.84e-30 | 9 |
face | 8.84e-30 | 9 |
optic cup | 8.84e-30 | 9 |
optic vesicle | 8.84e-30 | 9 |
eye primordium | 8.84e-30 | 9 |
subdivision of head | 1.34e-24 | 11 |
sense organ | 1.18e-22 | 12 |
sensory system | 1.18e-22 | 12 |
entire sense organ system | 1.18e-22 | 12 |
head | 5.26e-21 | 13 |
ectodermal placode | 5.26e-21 | 13 |
craniocervical region | 2.78e-08 | 36 |
anterior region of body | 4.30e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.