FFCP PHASE1:Mm9::chr1:134521050..134521067,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3228|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:134521050..134521067,-|id=chr1:134521050..134521067,-|ontology_enrichment_celltype=CL:0000540!1.06e-12!33;CL:0000047!1.06e-12!33;CL:0000031!1.06e-12!33;CL:0000404!1.06e-12!33;CL:0000393!3.81e-09!39;CL:0000211!3.81e-09!39;CL:0000221!4.98e-09!44;CL:0000133!4.98e-09!44;CL:0002319!1.08e-08!43;CL:0000117!3.18e-08!23;CL:0000337!3.18e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-12,33;CL:0000047,1.77e-12,33;CL:0000031,1.77e-12,33;CL:0000404,1.77e-12,33;CL:0000393,2.51e-09,39;CL:0000211,2.51e-09,39;CL:0000221,5.63e-09,44;CL:0000133,5.63e-09,44;CL:0002319,1.54e-08,43;CL:0000107,9.46e-08,9;CL:0000117,2.56e-07,23;CL:0000337,2.56e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.57e-30!102;UBERON:0000924!3.57e-30!102;UBERON:0006601!3.57e-30!102;UBERON:0002346!3.67e-30!71;UBERON:0003075!3.67e-30!71;UBERON:0007284!3.67e-30!71;UBERON:0000073!7.92e-29!75;UBERON:0001016!7.92e-29!75;UBERON:0001017!1.98e-28!73;UBERON:0005743!1.98e-28!73;UBERON:0000033!5.71e-26!63;UBERON:0003056!5.86e-23!49;UBERON:0001049!7.62e-23!52;UBERON:0005068!7.62e-23!52;UBERON:0006241!7.62e-23!52;UBERON:0007135!7.62e-23!52;UBERON:0000955!1.08e-21!50;UBERON:0006238!1.08e-21!50;UBERON:0002616!5.81e-21!49;UBERON:0003080!1.36e-18!40;UBERON:0002780!6.57e-18!39;UBERON:0001890!6.57e-18!39;UBERON:0006240!6.57e-18!39;UBERON:0002020!2.47e-14!34;UBERON:0007811!1.10e-13!86;UBERON:0002791!3.90e-12!29;UBERON:0003528!3.90e-12!29;UBERON:0001893!3.90e-12!29;UBERON:0000153!1.72e-11!94;UBERON:0000956!2.74e-09!21;UBERON:0001869!2.74e-09!21;UBERON:0000203!2.74e-09!21;UBERON:0002619!7.95e-08!17;UBERON:0002021!8.22e-08!10;UBERON:0000411!8.22e-08!10;UBERON:0001950!8.22e-08!10;UBERON:0001894!6.05e-07!10;UBERON:0006222!6.05e-07!10;UBERON:0000468!6.67e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.05e-37,64;UBERON:0003075,1.05e-37,64;UBERON:0007284,1.05e-37,64;UBERON:0004121,5.29e-37,95;UBERON:0000924,5.29e-37,95;UBERON:0006601,5.29e-37,95;UBERON:0001017,5.48e-36,73;UBERON:0001016,7.51e-36,75;UBERON:0010371,4.59e-33,73;UBERON:0000073,5.90e-30,54;UBERON:0001049,4.03e-29,52;UBERON:0005068,4.03e-29,52;UBERON:0006241,4.03e-29,52;UBERON:0007135,4.03e-29,52;UBERON:0003056,1.69e-27,49;UBERON:0000955,1.21e-25,47;UBERON:0006238,1.21e-25,47;UBERON:0002616,1.26e-24,46;UBERON:0010314,1.65e-24,92;UBERON:0003080,4.50e-22,40;UBERON:0002780,4.06e-21,39;UBERON:0001890,4.06e-21,39;UBERON:0006240,4.06e-21,39;UBERON:0002020,3.51e-16,34;UBERON:0003528,4.31e-13,29;UBERON:0002791,4.31e-13,29;UBERON:0001893,4.31e-13,29;UBERON:0002021,1.06e-10,10;UBERON:0000411,1.06e-10,10;UBERON:0001950,1.06e-10,10;UBERON:0000956,1.00e-09,21;UBERON:0001869,1.00e-09,21;UBERON:0000203,1.00e-09,21;UBERON:0001894,1.94e-09,10;UBERON:0006222,1.94e-09,10;UBERON:0002619,1.34e-08,17;UBERON:0002410,9.46e-08,9;UBERON:0000007,1.66e-07,8;UBERON:0003296,1.66e-07,8;UBERON:0010133,1.66e-07,8;UBERON:0003076,1.88e-07,12;UBERON:0003057,1.88e-07,12;UBERON:0000010,3.34e-07,11|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.573066879877513,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.7996195323289,0.945041568321835,1.05162480675691,1.71390590642282,2.20868540951614,0.979926393719632,1.0543001812006,0.919218786610021,3.30347642998166,1.53224805702225,1.22885226604995,1.45074916503213,0.548925861614458,1.04182674111352,1.67509799400829,2.25105044012672,2.44477196442896,2.35702868378934,3.41692033917847,1.3047961207771,1.51452386666368,0.453429360640713,0,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0.29688427812965,1.73485326766136,1.52232739156071,0.922461989024234,0.150722640552623,2.11659672844269,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0.484875253135222,1.86391761218122,13.7606974595427,10.0534419270458,0,0,0,0,6.44099749440738,5.94750783664214,2.63874139437015,9.56033761057521,6.39288643325826,6.44142938134636,9.40999325792994,0,0.124406970610093,0,5.47148825304832,1.43132487258974,1.83921683546778,0.540186389416048,2.10986744970001,2.51735046859913,3.07472928683639,3.37326208415024,14.2286853906459,0,0.567318240503458,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,3.99550902271842,6.48299057989492,0,0,0.639864751605702,2.09013004674395,0.128867461322093,0.80673409849337,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0.685491075658373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3228 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:134521050..134521067,- | |||
|id=chr1:134521050..134521067,- | |||
|ontology_enrichment_celltype=CL:0000540!1.06e-12!33;CL:0000047!1.06e-12!33;CL:0000031!1.06e-12!33;CL:0000404!1.06e-12!33;CL:0000393!3.81e-09!39;CL:0000211!3.81e-09!39;CL:0000221!4.98e-09!44;CL:0000133!4.98e-09!44;CL:0002319!1.08e-08!43;CL:0000117!3.18e-08!23;CL:0000337!3.18e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-12,33;CL:0000047,1.77e-12,33;CL:0000031,1.77e-12,33;CL:0000404,1.77e-12,33;CL:0000393,2.51e-09,39;CL:0000211,2.51e-09,39;CL:0000221,5.63e-09,44;CL:0000133,5.63e-09,44;CL:0002319,1.54e-08,43;CL:0000107,9.46e-08,9;CL:0000117,2.56e-07,23;CL:0000337,2.56e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.57e-30!102;UBERON:0000924!3.57e-30!102;UBERON:0006601!3.57e-30!102;UBERON:0002346!3.67e-30!71;UBERON:0003075!3.67e-30!71;UBERON:0007284!3.67e-30!71;UBERON:0000073!7.92e-29!75;UBERON:0001016!7.92e-29!75;UBERON:0001017!1.98e-28!73;UBERON:0005743!1.98e-28!73;UBERON:0000033!5.71e-26!63;UBERON:0003056!5.86e-23!49;UBERON:0001049!7.62e-23!52;UBERON:0005068!7.62e-23!52;UBERON:0006241!7.62e-23!52;UBERON:0007135!7.62e-23!52;UBERON:0000955!1.08e-21!50;UBERON:0006238!1.08e-21!50;UBERON:0002616!5.81e-21!49;UBERON:0003080!1.36e-18!40;UBERON:0002780!6.57e-18!39;UBERON:0001890!6.57e-18!39;UBERON:0006240!6.57e-18!39;UBERON:0002020!2.47e-14!34;UBERON:0007811!1.10e-13!86;UBERON:0002791!3.90e-12!29;UBERON:0003528!3.90e-12!29;UBERON:0001893!3.90e-12!29;UBERON:0000153!1.72e-11!94;UBERON:0000956!2.74e-09!21;UBERON:0001869!2.74e-09!21;UBERON:0000203!2.74e-09!21;UBERON:0002619!7.95e-08!17;UBERON:0002021!8.22e-08!10;UBERON:0000411!8.22e-08!10;UBERON:0001950!8.22e-08!10;UBERON:0001894!6.05e-07!10;UBERON:0006222!6.05e-07!10;UBERON:0000468!6.67e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.05e-37,64;UBERON:0003075,1.05e-37,64;UBERON:0007284,1.05e-37,64;UBERON:0004121,5.29e-37,95;UBERON:0000924,5.29e-37,95;UBERON:0006601,5.29e-37,95;UBERON:0001017,5.48e-36,73;UBERON:0001016,7.51e-36,75;UBERON:0010371,4.59e-33,73;UBERON:0000073,5.90e-30,54;UBERON:0001049,4.03e-29,52;UBERON:0005068,4.03e-29,52;UBERON:0006241,4.03e-29,52;UBERON:0007135,4.03e-29,52;UBERON:0003056,1.69e-27,49;UBERON:0000955,1.21e-25,47;UBERON:0006238,1.21e-25,47;UBERON:0002616,1.26e-24,46;UBERON:0010314,1.65e-24,92;UBERON:0003080,4.50e-22,40;UBERON:0002780,4.06e-21,39;UBERON:0001890,4.06e-21,39;UBERON:0006240,4.06e-21,39;UBERON:0002020,3.51e-16,34;UBERON:0003528,4.31e-13,29;UBERON:0002791,4.31e-13,29;UBERON:0001893,4.31e-13,29;UBERON:0002021,1.06e-10,10;UBERON:0000411,1.06e-10,10;UBERON:0001950,1.06e-10,10;UBERON:0000956,1.00e-09,21;UBERON:0001869,1.00e-09,21;UBERON:0000203,1.00e-09,21;UBERON:0001894,1.94e-09,10;UBERON:0006222,1.94e-09,10;UBERON:0002619,1.34e-08,17;UBERON:0002410,9.46e-08,9;UBERON:0000007,1.66e-07,8;UBERON:0003296,1.66e-07,8;UBERON:0010133,1.66e-07,8;UBERON:0003076,1.88e-07,12;UBERON:0003057,1.88e-07,12;UBERON:0000010,3.34e-07,11 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.573066879877513,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.7996195323289,0.945041568321835,1.05162480675691,1.71390590642282,2.20868540951614,0.979926393719632,1.0543001812006,0.919218786610021,3.30347642998166,1.53224805702225,1.22885226604995,1.45074916503213,0.548925861614458,1.04182674111352,1.67509799400829,2.25105044012672,2.44477196442896,2.35702868378934,3.41692033917847,1.3047961207771,1.51452386666368,0.453429360640713,0,0,0,0,0,0,0,0,0,0,1.54927761754349,0,0,0,0,0,0,0,0,0.29688427812965,1.73485326766136,1.52232739156071,0.922461989024234,0.150722640552623,2.11659672844269,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0.484875253135222,1.86391761218122,13.7606974595427,10.0534419270458,0,0,0,0,6.44099749440738,5.94750783664214,2.63874139437015,9.56033761057521,6.39288643325826,6.44142938134636,9.40999325792994,0,0.124406970610093,0,5.47148825304832,1.43132487258974,1.83921683546778,0.540186389416048,2.10986744970001,2.51735046859913,3.07472928683639,3.37326208415024,14.2286853906459,0,0.567318240503458,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0.268412837520744,3.99550902271842,6.48299057989492,0,0,0.639864751605702,2.09013004674395,0.128867461322093,0.80673409849337,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0.685491075658373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10374698521893,11.8807436590966,13.4793439581034,0,0,3.78609863299508,2.73307121007647,3.44677436372478,2.15071918157297,2.00518806674155,1.13230612315533,4.45291771842384,4.09158201075837,4.74345333535828,8.03303291054518,0,0,0.162886959353576,0,0,0.485561272309963,1.209294227859,0.377210159511796,0,0.922305443831782,1.29214146584111,0.727067458955011,0.356497378384721,1.26414703174326,14.7586052004998,1.03135543248187,14.9793426531667,2.34079422240703,1.4229455216103,4.50107773566344,3.19212420556092,3.74574516964348,4.60737257685939,2.13125464380219,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0.582961673259701,7.23158677840988,0.512612642393558,0,0.370389054739423,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,0,0.474503990371703,0.609958401380546,0.432021363287205,1.04544148007234,0.655087691238533,0.674321731924103,0.41326727862668,0,0,0,0,0,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0.58678619322877,0.13020438484395,0.524296722128554,0.241584120826006,0,0.632022241256357,0,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.680191150845634,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,8.471277639256,5.9842280745933,14.8952833494243,11.8578695817144,3.42541259885321,9.82012066606611,6.75022500231806,5.40385443869065,3.17199686288943,3.10656187051092,0.62272408550506,1.19707462020309,2.39027048055788,1.45864030240976,0.419226325255965,0.183843508450014,1.55572709461131,1.23621034343337,0.64183841918363,2.02157769411038,0.25347929989024,0.943131706930381,1.49826411951812,0.960377286073039,1.26358031702349,0,1.27472758539341,1.35036454324594,1.23625770240992,1.17759136107518,0.685738504770831,0.70990322463735,0.476872379894642,1.16277133305863,1.03520318456864,1.26921911837515,0.914639864363863,2.10455769150274,1.90125759384206,1.12228454331548,0.593175090620871,0.788035859004508,0.818462086339379,1.39443157067369,1.15743966588685,1.49886346762768,0.935726433781634,1.28922632428979,1.3390183244819,0.661774257358546,0.695603506861264 | |||
|short_description=p@chr1:134521050..134521067,- | |||
}} |
Revision as of 18:51, 13 September 2013
Short description: | p@chr1:134521050..134521067, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:134521050..134521067, - |
Coexpression cluster: | MCL_coexpression_mm9:3228 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.77e-12 | 33 |
neuronal stem cell | 1.77e-12 | 33 |
neuroblast | 1.77e-12 | 33 |
electrically signaling cell | 1.77e-12 | 33 |
electrically responsive cell | 2.51e-09 | 39 |
electrically active cell | 2.51e-09 | 39 |
ectodermal cell | 5.63e-09 | 44 |
neurectodermal cell | 5.63e-09 | 44 |
neural cell | 1.54e-08 | 43 |
autonomic neuron | 9.46e-08 | 9 |
CNS neuron (sensu Vertebrata) | 2.56e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.56e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.