FFCP PHASE1:Hg19::chr6:150920999..150921062,+: Difference between revisions
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{{FFCP | 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3,3.780064728066,0.237840181555137,2.14597555874024,0,16.1530242616341,16.5924439932081,9.17950154116621,2.82190377816914,9.31563622664841,10.3697680724715,10.4043487570921,5.94092800654172,17.7515405585028,0.169927114687817,34.8680335705257,57.9476412882459,8.39505709769403,10.7132363163395,10.5868461514708,2.56772373405338,18.2584097061629,7.79839781787719,11.8971854015705,0.157771562193185,4.69141282317311,6.54526035510566,17.9869125775236,0.371995018166751,1.38652688589425,0.865253124247578,0.756998549010474,2.07604586731021,0,0.917899467677836,0,0.827054095813604,0.50141507858475,8.94188638975225,7.77095977452918,9.12086383404657,8.37807266481351,12.5808049321579,19.9974122429542,87.1304393687722,100.623111873586,1.6819779387092,4.77353687086237,18.7968985731144,8.05551967218757,10.2669990325584,27.4122855769371,13.6272190246085,24.284206027859,9.19856935304012,0,5.7921684686082,11.5874510717497,2.34640942403454,17.358285073967,13.8344700627351,19.3069464513799,34.6190924976565,3.52625341533556|short_description=p1@PLEKHG1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=57480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20884 | |||
|TSSclassifier=S | |||
|UniProt=Q5T1F3,Q9ULL1,Q5JYA6 | |||
|association_with_transcript=0bp_to_ENST00000367326,ENST00000367328,NM_001029884,uc003qny.1,uc011eel.1_5end | |||
|description=CAGE_peak_1_at_PLEKHG1_5end | |||
|id=chr6:150920999..150921062,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.17e-12!24;CL:0000115!4.48e-11!35;CL:0000071!4.39e-10!18;CL:0002546!4.39e-10!18;CL:0002078!2.03e-07!44;CL:0000236!3.52e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.58e-13;24!CL:0000071;1.22e-10;18!CL:0000115;7.19e-10;36!CL:0000236;1.57e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.18e-13,24;CL:0000115,9.51e-12,36;CL:0000071,1.20e-10,18;CL:0002546,1.20e-10,18;CL:0002078,2.43e-08,45;CL:0000236,2.29e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002546;1.22e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-28!115;UBERON:0001049!4.15e-12!57;UBERON:0005068!4.15e-12!57;UBERON:0006241!4.15e-12!57;UBERON:0007135!4.15e-12!57;UBERON:0004111!1.47e-11!241;UBERON:0000477!1.49e-10!286;UBERON:0001986!4.39e-10!18;UBERON:0004638!4.39e-10!18;UBERON:0004852!4.39e-10!18;UBERON:0003080!5.68e-10!42;UBERON:0000025!1.04e-09!194;UBERON:0002780!1.53e-09!41;UBERON:0001890!1.53e-09!41;UBERON:0006240!1.53e-09!41;UBERON:0002616!1.75e-09!59;UBERON:0003075!2.73e-09!86;UBERON:0007284!2.73e-09!86;UBERON:0002020!1.59e-08!34;UBERON:0003528!1.59e-08!34;UBERON:0002346!1.96e-08!90;UBERON:0001017!2.46e-08!82;UBERON:0001893!3.03e-08!34;UBERON:0000487!3.83e-08!22;UBERON:0002791!4.76e-08!33;UBERON:0005743!6.82e-08!86;UBERON:0001869!1.23e-07!32;UBERON:0003056!1.77e-07!61;UBERON:0000955!2.48e-07!69;UBERON:0006238!2.48e-07!69;UBERON:0006914!4.75e-07!25;UBERON:0000483!7.53e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.22e-10;18!UBERON:0001986;1.22e-10;18!UBERON:0004852;1.22e-10;18!UBERON:0000487;8.18e-09;22!UBERON:0007023;3.18e-08;114!UBERON:0003528;6.63e-08;34!UBERON:0002020;6.63e-08;34!UBERON:0002791;1.24e-07;32!UBERON:0002780;1.35e-07;41!UBERON:0001890;1.35e-07;41!UBERON:0006914;1.63e-07;25!UBERON:0001893;1.64e-07;34!UBERON:0001869;2.06e-07;32!UBERON:0000073;2.36e-07;53!UBERON:0002616;2.36e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.00e-29,114;UBERON:0001049,1.63e-12,56;UBERON:0005068,1.63e-12,56;UBERON:0006241,1.63e-12,56;UBERON:0007135,1.63e-12,56;UBERON:0004111,2.15e-12,240;UBERON:0000073,1.55e-11,53;UBERON:0002616,1.55e-11,53;UBERON:0000025,5.58e-11,192;UBERON:0004638,1.20e-10,18;UBERON:0001986,1.20e-10,18;UBERON:0004852,1.20e-10,18;UBERON:0003075,2.22e-10,82;UBERON:0007284,2.22e-10,82;UBERON:0002780,4.55e-10,41;UBERON:0001890,4.55e-10,41;UBERON:0003080,4.55e-10,41;UBERON:0006240,4.55e-10,41;UBERON:0002346,1.59e-09,86;UBERON:0003528,5.53e-09,34;UBERON:0002020,5.53e-09,34;UBERON:0000487,8.56e-09,22;UBERON:0001893,1.10e-08,34;UBERON:0010371,1.41e-08,104;UBERON:0001017,1.98e-08,81;UBERON:0002791,3.24e-08,32;UBERON:0001869,4.88e-08,32;UBERON:0011216,4.98e-08,223;UBERON:0000955,8.95e-08,68;UBERON:0006238,8.95e-08,68;UBERON:0003056,9.27e-08,61;UBERON:0006914,1.34e-07,25;UBERON:0000483,4.25e-07,306;UBERON:0000119,7.67e-07,309 | |||
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| |||
|short_description=p1@PLEKHG1 | |||
}} |
Revision as of 18:44, 13 September 2013
Short description: | p1@PLEKHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLEKHG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367326, ENST00000367328, NM_001029884, uc003qny.1, uc011eel.1_5end |
EntrezGene: | PLEKHG1 |
HGNC: | 20884 |
UniProt: | Q5T1F3Q9ULL1Q5JYA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.18e-13 | 24 |
endothelial cell | 9.51e-12 | 36 |
blood vessel endothelial cell | 1.20e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.20e-10 | 18 |
meso-epithelial cell | 2.43e-08 | 45 |
B cell | 2.29e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.00e-29 | 114 |
neural tube | 1.63e-12 | 56 |
neural rod | 1.63e-12 | 56 |
future spinal cord | 1.63e-12 | 56 |
neural keel | 1.63e-12 | 56 |
anatomical conduit | 2.15e-12 | 240 |
regional part of nervous system | 1.55e-11 | 53 |
regional part of brain | 1.55e-11 | 53 |
tube | 5.58e-11 | 192 |
blood vessel endothelium | 1.20e-10 | 18 |
endothelium | 1.20e-10 | 18 |
cardiovascular system endothelium | 1.20e-10 | 18 |
neural plate | 2.22e-10 | 82 |
presumptive neural plate | 2.22e-10 | 82 |
regional part of forebrain | 4.55e-10 | 41 |
forebrain | 4.55e-10 | 41 |
anterior neural tube | 4.55e-10 | 41 |
future forebrain | 4.55e-10 | 41 |
neurectoderm | 1.59e-09 | 86 |
brain grey matter | 5.53e-09 | 34 |
gray matter | 5.53e-09 | 34 |
simple squamous epithelium | 8.56e-09 | 22 |
telencephalon | 1.10e-08 | 34 |
ecto-epithelium | 1.41e-08 | 104 |
central nervous system | 1.98e-08 | 81 |
regional part of telencephalon | 3.24e-08 | 32 |
cerebral hemisphere | 4.88e-08 | 32 |
organ system subdivision | 4.98e-08 | 223 |
brain | 8.95e-08 | 68 |
future brain | 8.95e-08 | 68 |
pre-chordal neural plate | 9.27e-08 | 61 |
squamous epithelium | 1.34e-07 | 25 |
epithelium | 4.25e-07 | 306 |
cell layer | 7.67e-07 | 309 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.