FFCP PHASE1:Mm9::chr1:106665087..106665103,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23836|HGNC=|MCL_coexpression_id=1736|UniProt=Q9Z0M3|association_with_transcript=-2bp_to_ENSMUST00000062528_5end|description=CAGE_peak_1_at_Cdh20_5end|id=chr1:106665087..106665103,+|ontology_enrichment_celltype=CL:0000221!3.43e-15!44;CL:0000133!3.43e-15!44;CL:0002319!9.96e-15!43;CL:0000540!1.81e-14!33;CL:0000047!1.81e-14!33;CL:0000031!1.81e-14!33;CL:0000404!1.81e-14!33;CL:0000117!9.35e-12!23;CL:0000337!9.35e-12!23;CL:0000055!1.83e-10!50;CL:0000393!3.49e-10!39;CL:0000211!3.49e-10!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.56e-16,33;CL:0000047,3.56e-16,33;CL:0000031,3.56e-16,33;CL:0000404,3.56e-16,33;CL:0000221,9.28e-16,44;CL:0000133,9.28e-16,44;CL:0002319,4.23e-15,43;CL:0000117,3.44e-14,23;CL:0000337,3.44e-14,23;CL:0000393,1.76e-12,39;CL:0000211,1.76e-12,39;CL:0002321,9.62e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.59e-31!73;UBERON:0005743!1.59e-31!73;UBERON:0000073!1.60e-31!75;UBERON:0001016!1.60e-31!75;UBERON:0004121!2.85e-30!102;UBERON:0000924!2.85e-30!102;UBERON:0006601!2.85e-30!102;UBERON:0000033!9.07e-26!63;UBERON:0002346!1.59e-25!71;UBERON:0003075!1.59e-25!71;UBERON:0007284!1.59e-25!71;UBERON:0001049!2.88e-21!52;UBERON:0005068!2.88e-21!52;UBERON:0006241!2.88e-21!52;UBERON:0007135!2.88e-21!52;UBERON:0003056!7.47e-21!49;UBERON:0000955!3.89e-20!50;UBERON:0006238!3.89e-20!50;UBERON:0002616!2.54e-19!49;UBERON:0002020!5.28e-16!34;UBERON:0003080!1.02e-14!40;UBERON:0002780!4.57e-14!39;UBERON:0001890!4.57e-14!39;UBERON:0006240!4.57e-14!39;UBERON:0002791!1.02e-12!29;UBERON:0003528!1.02e-12!29;UBERON:0001893!1.02e-12!29;UBERON:0007811!1.21e-12!86;UBERON:0000153!5.02e-11!94;UBERON:0000025!1.58e-08!114;UBERON:0000956!2.39e-08!21;UBERON:0001869!2.39e-08!21;UBERON:0000203!2.39e-08!21;UBERON:0004111!6.90e-08!122;UBERON:0000970!2.11e-07!9;UBERON:0000019!2.11e-07!9;UBERON:0000047!2.11e-07!9;UBERON:0004088!2.11e-07!9;UBERON:0002104!2.11e-07!9;UBERON:0001456!2.11e-07!9;UBERON:0003072!2.11e-07!9;UBERON:0003071!2.11e-07!9;UBERON:0004128!2.11e-07!9;UBERON:0003076!2.17e-07!12;UBERON:0003057!2.17e-07!12;UBERON:0002021!4.11e-07!10;UBERON:0000411!4.11e-07!10;UBERON:0001950!4.11e-07!10;UBERON:0000020!7.02e-07!12;UBERON:0001032!7.02e-07!12;UBERON:0004456!7.02e-07!12;UBERON:0002619!7.97e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.82e-40,95;UBERON:0000924,2.82e-40,95;UBERON:0006601,2.82e-40,95;UBERON:0002346,6.30e-38,64;UBERON:0003075,6.30e-38,64;UBERON:0007284,6.30e-38,64;UBERON:0001017,2.89e-37,73;UBERON:0010314,8.01e-36,92;UBERON:0001016,8.25e-36,75;UBERON:0010371,1.10e-32,73;UBERON:0000073,1.42e-27,54;UBERON:0001049,2.50e-25,52;UBERON:0005068,2.50e-25,52;UBERON:0006241,2.50e-25,52;UBERON:0007135,2.50e-25,52;UBERON:0003056,3.27e-24,49;UBERON:0002020,1.88e-20,34;UBERON:0000955,1.98e-20,47;UBERON:0006238,1.98e-20,47;UBERON:0002616,2.64e-19,46;UBERON:0003528,1.64e-15,29;UBERON:0002791,1.64e-15,29;UBERON:0001893,1.64e-15,29;UBERON:0003080,1.96e-15,40;UBERON:0002780,1.59e-14,39;UBERON:0001890,1.59e-14,39;UBERON:0006240,1.59e-14,39;UBERON:0000025,2.99e-12,114;UBERON:0003076,3.23e-11,12;UBERON:0003057,3.23e-11,12;UBERON:0004111,3.23e-11,122;UBERON:0000483,5.57e-11,174;UBERON:0000970,8.94e-11,9;UBERON:0000019,8.94e-11,9;UBERON:0000047,8.94e-11,9;UBERON:0010312,8.94e-11,9;UBERON:0004088,8.94e-11,9;UBERON:0002104,8.94e-11,9;UBERON:0001456,8.94e-11,9;UBERON:0003072,8.94e-11,9;UBERON:0004128,8.94e-11,9;UBERON:0003071,8.94e-11,9;UBERON:0000119,1.17e-10,176;UBERON:0002021,2.54e-10,10;UBERON:0000411,2.54e-10,10;UBERON:0001950,2.54e-10,10;UBERON:0000956,4.84e-09,21;UBERON:0001869,4.84e-09,21;UBERON:0000203,4.84e-09,21;UBERON:0000020,5.02e-09,12;UBERON:0001032,5.02e-09,12;UBERON:0004456,5.02e-09,12;UBERON:0001444,2.31e-08,11;UBERON:0002420,2.56e-08,8;UBERON:0007245,2.56e-08,8;UBERON:0010009,2.56e-08,8;UBERON:0010011,2.56e-08,8;UBERON:0000454,2.56e-08,8;UBERON:0000033,4.05e-08,13;UBERON:0005085,4.05e-08,13;UBERON:0002240,1.02e-07,6;UBERON:0005174,1.02e-07,6;UBERON:0001137,1.02e-07,6;UBERON:0002619,1.18e-07,17|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.219686182734472,0,0.279972843250725,4.31257693094915,0,0,0,0,0,0,2.63011399117477,3.1739458756322,1.26766280701236,0,0,0,0,0,2.09720077362883,1.53687322128622,0.518448061542388,1.35005938331691,1.68259969081106,5.14171771926846,9.49734726091938,0.734944795289724,0.958454710182364,0,6.60695285996332,11.8749224419225,12.1349161272432,1.71452174049252,1.55528994124096,1.56274011167028,13.6799669510677,6.19038871034848,9.77908785771585,7.95497180778903,7.83044244395066,5.77838282058432,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0.161766849947409,0,0,0,6.44117753425404,6.70229461803056,0,0,0,0,7.48953197024113,4.11750542536764,2.76439574648302,6.77914848749878,6.90431734791892,11.2205544062162,5.19172041816825,0,0,0,1.05220927943237,2.47228841629137,8.96618207290544,11.5239763075424,13.1113191517072,15.7164313039567,13.5800543501941,11.8064172945258,3.3631438196072,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,0,0,0,1.24275463521301,1.40715635988658,1.2604344302271,1.18372367792605,1.57411385397923,1.54267112887378,1.39520366850245,1.87791380979733,0.934122738937356,1.81015834904829,0.656669856316381,0.972825714550269,0.877199924551994,1.75640092232841,1.07365135008297,9.46304768538573,2.77842453424068,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0.234690248288502,1.00503754465089,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,11.2385412991454,12.6588621519579,0,0,1.57754109708128,2.34263246577983,6.46270193198397,0.238968797952552,0.222798674082394,0,5.26253912177363,9.64444331107329,4.74345333535828,13.1741739732941,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,1.62054984628179,0.258717367565509,0,0.532020700926821,0.178368817602071,0.164549020602121,1.2178597964584,0,0,0.220528398054962,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,11.1255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,5.9842280745933,2.29158205375759,7.90524638780963,2.05524755931193,6.7985450765073,8.10027000278167,1.80128481289688,3.17199686288943,2.07104124700728,0.31136204275253,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,1.10306105070008,0.888986911206461,1.23621034343337,0,0,0.25347929989024,0.377252682772152,0.842773567228942,0.320125762024346,0.516919220600519,1.90517476513229,0.579421629724277,0.77163688185482,1.23625770240992,0.588795680537589,1.02860775715625,0.532427418478012,0.953744759789284,1.45346416632329,0.752875043322645,1.26921911837515,0.73171189149109,0.263069711437843,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,0,0.464810523557898,0.385813221962283,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p1@Cdh20}} | ||
|EntrezGene=23836 | |||
|HGNC= | |||
|MCL_coexpression_id=1736 | |||
|UniProt=Q9Z0M3 | |||
|association_with_transcript=-2bp_to_ENSMUST00000062528_5end | |||
|description=CAGE_peak_1_at_Cdh20_5end | |||
|id=chr1:106665087..106665103,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.43e-15!44;CL:0000133!3.43e-15!44;CL:0002319!9.96e-15!43;CL:0000540!1.81e-14!33;CL:0000047!1.81e-14!33;CL:0000031!1.81e-14!33;CL:0000404!1.81e-14!33;CL:0000117!9.35e-12!23;CL:0000337!9.35e-12!23;CL:0000055!1.83e-10!50;CL:0000393!3.49e-10!39;CL:0000211!3.49e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.56e-16,33;CL:0000047,3.56e-16,33;CL:0000031,3.56e-16,33;CL:0000404,3.56e-16,33;CL:0000221,9.28e-16,44;CL:0000133,9.28e-16,44;CL:0002319,4.23e-15,43;CL:0000117,3.44e-14,23;CL:0000337,3.44e-14,23;CL:0000393,1.76e-12,39;CL:0000211,1.76e-12,39;CL:0002321,9.62e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.59e-31!73;UBERON:0005743!1.59e-31!73;UBERON:0000073!1.60e-31!75;UBERON:0001016!1.60e-31!75;UBERON:0004121!2.85e-30!102;UBERON:0000924!2.85e-30!102;UBERON:0006601!2.85e-30!102;UBERON:0000033!9.07e-26!63;UBERON:0002346!1.59e-25!71;UBERON:0003075!1.59e-25!71;UBERON:0007284!1.59e-25!71;UBERON:0001049!2.88e-21!52;UBERON:0005068!2.88e-21!52;UBERON:0006241!2.88e-21!52;UBERON:0007135!2.88e-21!52;UBERON:0003056!7.47e-21!49;UBERON:0000955!3.89e-20!50;UBERON:0006238!3.89e-20!50;UBERON:0002616!2.54e-19!49;UBERON:0002020!5.28e-16!34;UBERON:0003080!1.02e-14!40;UBERON:0002780!4.57e-14!39;UBERON:0001890!4.57e-14!39;UBERON:0006240!4.57e-14!39;UBERON:0002791!1.02e-12!29;UBERON:0003528!1.02e-12!29;UBERON:0001893!1.02e-12!29;UBERON:0007811!1.21e-12!86;UBERON:0000153!5.02e-11!94;UBERON:0000025!1.58e-08!114;UBERON:0000956!2.39e-08!21;UBERON:0001869!2.39e-08!21;UBERON:0000203!2.39e-08!21;UBERON:0004111!6.90e-08!122;UBERON:0000970!2.11e-07!9;UBERON:0000019!2.11e-07!9;UBERON:0000047!2.11e-07!9;UBERON:0004088!2.11e-07!9;UBERON:0002104!2.11e-07!9;UBERON:0001456!2.11e-07!9;UBERON:0003072!2.11e-07!9;UBERON:0003071!2.11e-07!9;UBERON:0004128!2.11e-07!9;UBERON:0003076!2.17e-07!12;UBERON:0003057!2.17e-07!12;UBERON:0002021!4.11e-07!10;UBERON:0000411!4.11e-07!10;UBERON:0001950!4.11e-07!10;UBERON:0000020!7.02e-07!12;UBERON:0001032!7.02e-07!12;UBERON:0004456!7.02e-07!12;UBERON:0002619!7.97e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.82e-40,95;UBERON:0000924,2.82e-40,95;UBERON:0006601,2.82e-40,95;UBERON:0002346,6.30e-38,64;UBERON:0003075,6.30e-38,64;UBERON:0007284,6.30e-38,64;UBERON:0001017,2.89e-37,73;UBERON:0010314,8.01e-36,92;UBERON:0001016,8.25e-36,75;UBERON:0010371,1.10e-32,73;UBERON:0000073,1.42e-27,54;UBERON:0001049,2.50e-25,52;UBERON:0005068,2.50e-25,52;UBERON:0006241,2.50e-25,52;UBERON:0007135,2.50e-25,52;UBERON:0003056,3.27e-24,49;UBERON:0002020,1.88e-20,34;UBERON:0000955,1.98e-20,47;UBERON:0006238,1.98e-20,47;UBERON:0002616,2.64e-19,46;UBERON:0003528,1.64e-15,29;UBERON:0002791,1.64e-15,29;UBERON:0001893,1.64e-15,29;UBERON:0003080,1.96e-15,40;UBERON:0002780,1.59e-14,39;UBERON:0001890,1.59e-14,39;UBERON:0006240,1.59e-14,39;UBERON:0000025,2.99e-12,114;UBERON:0003076,3.23e-11,12;UBERON:0003057,3.23e-11,12;UBERON:0004111,3.23e-11,122;UBERON:0000483,5.57e-11,174;UBERON:0000970,8.94e-11,9;UBERON:0000019,8.94e-11,9;UBERON:0000047,8.94e-11,9;UBERON:0010312,8.94e-11,9;UBERON:0004088,8.94e-11,9;UBERON:0002104,8.94e-11,9;UBERON:0001456,8.94e-11,9;UBERON:0003072,8.94e-11,9;UBERON:0004128,8.94e-11,9;UBERON:0003071,8.94e-11,9;UBERON:0000119,1.17e-10,176;UBERON:0002021,2.54e-10,10;UBERON:0000411,2.54e-10,10;UBERON:0001950,2.54e-10,10;UBERON:0000956,4.84e-09,21;UBERON:0001869,4.84e-09,21;UBERON:0000203,4.84e-09,21;UBERON:0000020,5.02e-09,12;UBERON:0001032,5.02e-09,12;UBERON:0004456,5.02e-09,12;UBERON:0001444,2.31e-08,11;UBERON:0002420,2.56e-08,8;UBERON:0007245,2.56e-08,8;UBERON:0010009,2.56e-08,8;UBERON:0010011,2.56e-08,8;UBERON:0000454,2.56e-08,8;UBERON:0000033,4.05e-08,13;UBERON:0005085,4.05e-08,13;UBERON:0002240,1.02e-07,6;UBERON:0005174,1.02e-07,6;UBERON:0001137,1.02e-07,6;UBERON:0002619,1.18e-07,17 | |||
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|short_description=p1@Cdh20 | |||
}} |
Revision as of 18:31, 13 September 2013
Short description: | p1@Cdh20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdh20_5end |
Coexpression cluster: | MCL_coexpression_mm9:1736 |
Association with transcript: | -2bp_to_ENSMUST00000062528_5end |
EntrezGene: | Cdh20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.56e-16 | 33 |
neuronal stem cell | 3.56e-16 | 33 |
neuroblast | 3.56e-16 | 33 |
electrically signaling cell | 3.56e-16 | 33 |
ectodermal cell | 9.28e-16 | 44 |
neurectodermal cell | 9.28e-16 | 44 |
neural cell | 4.23e-15 | 43 |
CNS neuron (sensu Vertebrata) | 3.44e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.44e-14 | 23 |
electrically responsive cell | 1.76e-12 | 39 |
electrically active cell | 1.76e-12 | 39 |
embryonic cell | 9.62e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.