FFCP PHASE1:Hg19::chr6:12012249..12012266,+: Difference between revisions
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{{FFCP | 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29169439458779,0.517164979309476,1.49263787330687,0.476128862927481,0.775066918032073,0.931120714437869,0.224263725161227,0.25458863311266,0.404234377916439,0.870866991587845,0,0.80822463617505,2.07994395638761,0.332660356546013,1.05824249194267,2.02781957167659,1.9307228228694,1.07790242527904,9.38563769613817,0.733448665097199,2.03448089157869,3.32878387092756,1.20764276154616,3.8468219076388|short_description=p5@HIVEP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4920 | |||
|TSSclassifier=S | |||
|UniProt=C9J2N3 | |||
|association_with_transcript=16bp_to_ENST00000487103_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_HIVEP1_5end | |||
|id=chr6:12012249..12012266,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.36e-27!140;CL:0002057!3.42e-26!42;CL:0000766!1.53e-25!76;CL:0000860!2.25e-24!45;CL:0000557!5.00e-23!71;CL:0002009!2.13e-21!65;CL:0000839!9.22e-21!70;CL:0002194!2.92e-20!63;CL:0000576!2.92e-20!63;CL:0000040!2.92e-20!63;CL:0000559!2.92e-20!63;CL:0002031!1.34e-19!124;CL:0002087!2.91e-19!119;CL:0000037!5.60e-17!172;CL:0000566!5.60e-17!172;CL:0000988!2.90e-16!182;CL:0002032!2.45e-15!165;CL:0000837!2.45e-15!165;CL:0000763!2.55e-14!112;CL:0000049!2.55e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-26;33!CL:0002057;1.03e-26;33!CL:0000473;1.93e-21;39!CL:0000234;1.93e-21;39!CL:0000576;4.07e-19;48!CL:0000766;1.63e-16;69!CL:0002087;1.01e-09;104!CL:0000738;1.89e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.58e-37,136;CL:0000860,4.36e-35,42;CL:0002057,4.36e-35,42;CL:0000473,2.77e-34,48;CL:0000234,2.77e-34,48;CL:0000766,6.25e-33,72;CL:0000557,4.64e-30,67;CL:0002009,1.45e-28,61;CL:0002194,5.31e-27,59;CL:0000576,5.31e-27,59;CL:0000040,5.31e-27,59;CL:0000559,5.31e-27,59;CL:0000839,1.08e-26,66;CL:0002087,2.51e-26,115;CL:0002031,4.54e-26,120;CL:0000037,3.02e-24,168;CL:0000988,1.31e-23,177;CL:0002032,2.17e-22,161;CL:0000837,2.17e-22,161;CL:0000763,1.98e-20,108;CL:0000049,1.98e-20,108;CL:0000134,3.14e-09,354;CL:0002320,2.51e-08,361;CL:0000219,2.65e-08,386;CL:0002393,1.56e-07,9;CL:0002397,1.56e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.85e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.18e-23!102;UBERON:0003061!2.18e-23!102;UBERON:0002193!9.22e-23!112;UBERON:0002405!3.93e-20!115;UBERON:0002371!7.71e-20!80;UBERON:0001474!2.36e-18!86;UBERON:0004765!1.93e-16!101;UBERON:0001434!1.93e-16!101;UBERON:0003081!5.03e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.30e-28,98;UBERON:0003061,2.30e-28,98;UBERON:0002193,1.26e-27,108;UBERON:0002371,2.01e-26,76;UBERON:0001474,1.64e-24,82;UBERON:0002405,2.65e-24,93;UBERON:0004765,3.43e-21,90;UBERON:0001434,5.28e-18,100;UBERON:0003081,1.37e-12,203;UBERON:0002384,4.23e-08,371 | |||
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| |||
|short_description=p5@HIVEP1 | |||
}} |
Revision as of 17:39, 13 September 2013
Short description: | p5@HIVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HIVEP1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 16bp_to_ENST00000487103_5end |
EntrezGene: | HIVEP1 |
HGNC: | 4920 |
UniProt: | C9J2N3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.58e-37 | 136 |
classical monocyte | 4.36e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.36e-35 | 42 |
defensive cell | 2.77e-34 | 48 |
phagocyte | 2.77e-34 | 48 |
myeloid leukocyte | 6.25e-33 | 72 |
granulocyte monocyte progenitor cell | 4.64e-30 | 67 |
macrophage dendritic cell progenitor | 1.45e-28 | 61 |
monopoietic cell | 5.31e-27 | 59 |
monocyte | 5.31e-27 | 59 |
monoblast | 5.31e-27 | 59 |
promonocyte | 5.31e-27 | 59 |
myeloid lineage restricted progenitor cell | 1.08e-26 | 66 |
nongranular leukocyte | 2.51e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 4.54e-26 | 120 |
hematopoietic stem cell | 3.02e-24 | 168 |
hematopoietic cell | 1.31e-23 | 177 |
hematopoietic oligopotent progenitor cell | 2.17e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.17e-22 | 161 |
myeloid cell | 1.98e-20 | 108 |
common myeloid progenitor | 1.98e-20 | 108 |
mesenchymal cell | 3.14e-09 | 354 |
connective tissue cell | 2.51e-08 | 361 |
motile cell | 2.65e-08 | 386 |
intermediate monocyte | 1.56e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.56e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.30e-28 | 98 |
blood island | 2.30e-28 | 98 |
hemolymphoid system | 1.26e-27 | 108 |
bone marrow | 2.01e-26 | 76 |
bone element | 1.64e-24 | 82 |
immune system | 2.65e-24 | 93 |
skeletal element | 3.43e-21 | 90 |
skeletal system | 5.28e-18 | 100 |
lateral plate mesoderm | 1.37e-12 | 203 |
connective tissue | 4.23e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.