FFCP PHASE1:Mm9::chr19:41922566..41922601,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=212398|HGNC=|MCL_coexpression_id=877|UniProt=Q8K025,B2RU64|association_with_transcript=20bp_to_ENSMUST00000059231,NM_177603,uc008hmj.2_5end|description=CAGE_peak_1_at_Frat2_5end|id=chr19:41922566..41922601,-|ontology_enrichment_celltype=CL:0000144!3.63e-10!121;CL:0000012!3.63e-10!121;CL:0002371!7.06e-09!118;CL:0000063!2.32e-08!66;CL:0000548!4.66e-08!115;CL:0000004!4.66e-08!115;CL:0000255!4.66e-08!115;CL:0000034!6.70e-07!97;CL:0002563!8.90e-07!9;CL:0002251!8.90e-07!9|ontology_enrichment_celltype_v019_2=CL:0000034,4.51e-07,97;CL:0002563,6.67e-07,9;CL:0002251,6.67e-07,9;CL:0000066,7.90e-07,25;CL:0000723,8.93e-07,91;CL:0000048,8.93e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.22e-08!15;UBERON:0001242!7.09e-08!13;UBERON:0000060!7.09e-08!13;UBERON:0001262!7.09e-08!13;UBERON:0004786!7.09e-08!13;UBERON:0000485!1.45e-07!11;UBERON:0003350!8.90e-07!9;UBERON:0004808!8.90e-07!9;UBERON:0001277!8.90e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.49e-09,31;UBERON:0000344,8.25e-09,15;UBERON:0001242,5.01e-08,13;UBERON:0001262,5.01e-08,13;UBERON:0004786,5.01e-08,13;UBERON:0000485,1.04e-07,11;UBERON:0003350,6.67e-07,9;UBERON:0004808,6.67e-07,9;UBERON:0001277,6.67e-07,9|phase1_expression=6.40595388419176,9.07336059862339,18.1999695755814,14.8207463540347,37.0662840160297,22.3279431642813,20.0906870912152,15.6239221364307,52.37340464042,53.3667120014145,1.36974374580404,0.717949430958028,12.3264525550468,11.4520727168887,5.99597571268193,4.656931149966,6.29605690315332,2.83915948822414,1.91960207048034,8.91218268775863,13.436839843869,9.73051321768676,9.92559198727954,7.51964387129011,10.5528269290898,14.9300310669905,10.7690499039769,11.635446565038,7.79096019771133,8.82105454159758,9.09095093686749,0,0.61506478758457,0,23.108129580102,16.9559338265662,19.6002582011874,12.5559489221072,5.4693474116666,4.18818995179039,8.82347232046521,15.7100461540443,8.25367600152961,0,0.202753862439029,0.734187008646726,0.782391344348039,6.5407546914134,1.75748946187577,2.52758868796568,1.25987779462826,2.87505128729943,8.05356509077134,46.423177088726,26.5514101322547,2.57259436035947,0.85960031981627,1.54701627683233,4.45096213891115,2.64495489636016,3.80298842103708,0.677689064138264,0.889294796111139,1.7997994345628,1.97773272513395,2.8419204597844,3.89480143673926,5.37905627450176,10.1615820062308,10.3954572515402,10.3059231062177,3.14216082844184,3.09215957332259,12.8615339175702,10.8305382250607,10.1114066527102,1.10115880999389,1.27687338085188,1.53606533256243,4.87979264601717,3.7509933876988,3.12548022334056,0.837548997004143,1.68828783009504,1.98637722109853,0.883885756421003,1.99320353118744,4.47358669980721,1.4387976733305,4.98772296704784,6.66688324013859,3.44169550792555,8.15965600449301,3.2382191498269,2.59910566979068,0.448026887097336,2.94933282276679,0.170430322578058,0.259786004602869,0,13.0984380392313,0,0,0,7.36069539438128,4.56047757855178,6.57181778519218,5.82337786567206,0,0.148442139064825,1.04091196059682,0.608930956624282,1.38369298353635,0.60289056221049,1.05829836422134,1.0053327306374,0.988779870937496,0,0,1.29413479957927,4.85851340612866,5.33362778448744,14.9113408974498,0.292780797011547,1.04723353406728,6.38642638021478,18.4515291739117,19.7967901227825,19.0605340609597,0.299581278809645,0.915001205637253,5.02617408451458,0.695297280769106,1.02286182932132,0.62336413367868,1.29793010454206,2.03678727700633,2.36373244159177,0.252722758433675,0.841767423545896,4.29397461776922,12.644615743841,6.30217454318722,7.53524089178575,11.9063873514824,8.45550553880009,11.056803498048,2.32833033665114,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,0.556094498451196,1.0447564995665,0.61734640922383,1.39323986772945,12.6398373716382,12.8673953557358,19.6072814582959,0.414251545071004,1.17263029990548,0.540186184383045,0.710234206755631,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,1.63471479314037,0.493679549740441,0.820837320395476,0.810688095458557,1.16959989940266,0,1.47627060636409,1.47202963994889,9.36431972651488,3.30418782983798,5.28901133327089,1.49301775374664,2.09013004674395,3.09281907173024,1.61346819698674,3.11329261382818,1.71203063501303,8.54152310780121,1.15289268306808,3.01602250560323,2.38747766449381,2.14460495831032,3.59527763461689,6.70027954611552,8.16479220342906,1.70701110857774,0.685491075658373,3.38123207019241,0.610953983535943,1.35766741017338,3.29638353484497,0.632365371242573,0.442830443938806,0.156998727841375,0.987177311374404,0,3.17005700860579,2.55526693647164,1.79889689907883,2.43432145666204,1.92941727801933,2.80088436959562,1.72617682470486,4.37765112292595,1.09824565275233,1.43768206527355,1.11642284300551,1.24815069245824,0.757736633841335,0.538192240565737,1.4473305640901,0.369506380333209,1.32643988239339,0.651859905768103,1.01847051465113,1.64283173801951,1.17254380209271,0.952174563544055,3.51240566144038,0.472905432318573,1.328788137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| ||
|EntrezGene=212398 | |||
|HGNC= | |||
|MCL_coexpression_id=877 | |||
|UniProt=Q8K025,B2RU64 | |||
|association_with_transcript=20bp_to_ENSMUST00000059231,NM_177603,uc008hmj.2_5end | |||
|description=CAGE_peak_1_at_Frat2_5end | |||
|id=chr19:41922566..41922601,- | |||
|ontology_enrichment_celltype=CL:0000144!3.63e-10!121;CL:0000012!3.63e-10!121;CL:0002371!7.06e-09!118;CL:0000063!2.32e-08!66;CL:0000548!4.66e-08!115;CL:0000004!4.66e-08!115;CL:0000255!4.66e-08!115;CL:0000034!6.70e-07!97;CL:0002563!8.90e-07!9;CL:0002251!8.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.51e-07,97;CL:0002563,6.67e-07,9;CL:0002251,6.67e-07,9;CL:0000066,7.90e-07,25;CL:0000723,8.93e-07,91;CL:0000048,8.93e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.22e-08!15;UBERON:0001242!7.09e-08!13;UBERON:0000060!7.09e-08!13;UBERON:0001262!7.09e-08!13;UBERON:0004786!7.09e-08!13;UBERON:0000485!1.45e-07!11;UBERON:0003350!8.90e-07!9;UBERON:0004808!8.90e-07!9;UBERON:0001277!8.90e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.49e-09,31;UBERON:0000344,8.25e-09,15;UBERON:0001242,5.01e-08,13;UBERON:0001262,5.01e-08,13;UBERON:0004786,5.01e-08,13;UBERON:0000485,1.04e-07,11;UBERON:0003350,6.67e-07,9;UBERON:0004808,6.67e-07,9;UBERON:0001277,6.67e-07,9 | |||
|phase1_expression=6.40595388419176,9.07336059862339,18.1999695755814,14.8207463540347,37.0662840160297,22.3279431642813,20.0906870912152,15.6239221364307,52.37340464042,53.3667120014145,1.36974374580404,0.717949430958028,12.3264525550468,11.4520727168887,5.99597571268193,4.656931149966,6.29605690315332,2.83915948822414,1.91960207048034,8.91218268775863,13.436839843869,9.73051321768676,9.92559198727954,7.51964387129011,10.5528269290898,14.9300310669905,10.7690499039769,11.635446565038,7.79096019771133,8.82105454159758,9.09095093686749,0,0.61506478758457,0,23.108129580102,16.9559338265662,19.6002582011874,12.5559489221072,5.4693474116666,4.18818995179039,8.82347232046521,15.7100461540443,8.25367600152961,0,0.202753862439029,0.734187008646726,0.782391344348039,6.5407546914134,1.75748946187577,2.52758868796568,1.25987779462826,2.87505128729943,8.05356509077134,46.423177088726,26.5514101322547,2.57259436035947,0.85960031981627,1.54701627683233,4.45096213891115,2.64495489636016,3.80298842103708,0.677689064138264,0.889294796111139,1.7997994345628,1.97773272513395,2.8419204597844,3.89480143673926,5.37905627450176,10.1615820062308,10.3954572515402,10.3059231062177,3.14216082844184,3.09215957332259,12.8615339175702,10.8305382250607,10.1114066527102,1.10115880999389,1.27687338085188,1.53606533256243,4.87979264601717,3.7509933876988,3.12548022334056,0.837548997004143,1.68828783009504,1.98637722109853,0.883885756421003,1.99320353118744,4.47358669980721,1.4387976733305,4.98772296704784,6.66688324013859,3.44169550792555,8.15965600449301,3.2382191498269,2.59910566979068,0.448026887097336,2.94933282276679,0.170430322578058,0.259786004602869,0,13.0984380392313,0,0,0,7.36069539438128,4.56047757855178,6.57181778519218,5.82337786567206,0,0.148442139064825,1.04091196059682,0.608930956624282,1.38369298353635,0.60289056221049,1.05829836422134,1.0053327306374,0.988779870937496,0,0,1.29413479957927,4.85851340612866,5.33362778448744,14.9113408974498,0.292780797011547,1.04723353406728,6.38642638021478,18.4515291739117,19.7967901227825,19.0605340609597,0.299581278809645,0.915001205637253,5.02617408451458,0.695297280769106,1.02286182932132,0.62336413367868,1.29793010454206,2.03678727700633,2.36373244159177,0.252722758433675,0.841767423545896,4.29397461776922,12.644615743841,6.30217454318722,7.53524089178575,11.9063873514824,8.45550553880009,11.056803498048,2.32833033665114,0.431135985865684,0.756424320671277,1.05570674498369,0.43839146485515,0.556094498451196,1.0447564995665,0.61734640922383,1.39323986772945,12.6398373716382,12.8673953557358,19.6072814582959,0.414251545071004,1.17263029990548,0.540186184383045,0.710234206755631,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,1.63471479314037,0.493679549740441,0.820837320395476,0.810688095458557,1.16959989940266,0,1.47627060636409,1.47202963994889,9.36431972651488,3.30418782983798,5.28901133327089,1.49301775374664,2.09013004674395,3.09281907173024,1.61346819698674,3.11329261382818,1.71203063501303,8.54152310780121,1.15289268306808,3.01602250560323,2.38747766449381,2.14460495831032,3.59527763461689,6.70027954611552,8.16479220342906,1.70701110857774,0.685491075658373,3.38123207019241,0.610953983535943,1.35766741017338,3.29638353484497,0.632365371242573,0.442830443938806,0.156998727841375,0.987177311374404,0,3.17005700860579,2.55526693647164,1.79889689907883,2.43432145666204,1.92941727801933,2.80088436959562,1.72617682470486,4.37765112292595,1.09824565275233,1.43768206527355,1.11642284300551,1.24815069245824,0.757736633841335,0.538192240565737,1.4473305640901,0.369506380333209,1.32643988239339,0.651859905768103,1.01847051465113,1.64283173801951,1.17254380209271,0.952174563544055,3.51240566144038,0.472905432318573,1.32878813789265,0.797273843287435,1.14704320301017,1.20879487306127,1.44649058581512,1.50791283939272,0.54390568381871,0.983528546038072,1.10374698521893,0.481651769963376,1.28932855251423,0.655739781506702,12.1186045058099,1.57754109708128,1.56175497718655,1.29254038639679,2.86762557543062,1.55959071857676,1.98153571552183,2.42886421004937,2.04579100537918,1.18586333383957,1.60660658210904,1.27746076687442,0.890328018336276,2.60619134965722,0.164970122972535,2.65490276679926,1.21390318077491,3.02323556964751,0.754420319023592,0.295301892880773,0.614870295887855,3.10113951801865,2.90826983582004,2.49548164869305,0.316036757935816,1.05418608574999,3.09406629744561,0.680879211507576,2.52085531643834,2.8458910432206,3.64372959553707,2.12808280370728,1.96205699362278,1.48094118541909,2.74018454203139,0.704015124191131,1.27099242518292,0,0.49465875882444,2.58343082713449,1.38719727334758,1.79058516004705,1.96969079694074,4.95517422270746,0.927126510052548,3.2465467351592,1.44470807574256,2.03713980106683,3.76736914009382,1.6403307326523,2.0590035588587,21.2473037492319,19.1733489683411,18.3805965159884,0.954670618015114,3.00519193902079,1.42323626988794,1.94409613479242,1.88179466413022,2.18362563746178,0.944050424693745,1.07449492442937,0.26175594198403,10.628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| |||
|short_description=p1@Frat2 | |||
}} | |||
Revision as of 17:38, 13 September 2013
| Short description: | p1@Frat2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Frat2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:877 |
| Association with transcript: | 20bp_to_ENSMUST00000059231, NM_177603, uc008hmj.2_5end |
| EntrezGene: | Frat2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stem cell | 4.51e-07 | 97 |
| intestinal epithelial cell | 6.67e-07 | 9 |
| epithelial cell of alimentary canal | 6.67e-07 | 9 |
| epithelial cell | 7.90e-07 | 25 |
| somatic stem cell | 8.93e-07 | 91 |
| multi fate stem cell | 8.93e-07 | 91 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 7.49e-09 | 31 |
| mucosa | 8.25e-09 | 15 |
| intestinal mucosa | 5.01e-08 | 13 |
| wall of intestine | 5.01e-08 | 13 |
| gastrointestinal system mucosa | 5.01e-08 | 13 |
| simple columnar epithelium | 1.04e-07 | 11 |
| epithelium of mucosa | 6.67e-07 | 9 |
| gastrointestinal system epithelium | 6.67e-07 | 9 |
| intestinal epithelium | 6.67e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
