FFCP PHASE1:Hg19::chr6:11607864..11607875,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1695|description=CAGE_peak_at_chr6:11607864..11607875,+|id=chr6:11607864..11607875,+|ontology_enrichment_celltype=CL:0002139!4.88e-89!24;CL:0000071!1.31e-73!18;CL:0002546!1.31e-73!18;CL:0000115!3.41e-59!35;CL:0002078!7.10e-46!44;CL:1000413!7.35e-38!9;CL:0000213!2.92e-37!57;CL:0000215!2.92e-37!57;CL:0000222!1.23e-26!119;CL:0002544!6.44e-26!6;CL:0002543!9.02e-26!6;CL:0000076!9.57e-23!62;CL:0005020!2.72e-17!6;CL:0002138!2.72e-17!6;CL:0005022!2.72e-17!6;CL:0002618!2.15e-13!3;CL:0002144!4.52e-13!3;CL:0000220!1.34e-11!246;CL:0002321!1.91e-11!248;CL:0002594!7.29e-10!4;CL:0002545!9.64e-10!2|ontology_enrichment_celltype_v019=CL:0000071;4.05e-88;18!CL:0002139;4.34e-66;24!CL:1000413;1.31e-54;9!CL:0002543;2.53e-53;6!CL:0002544;8.45e-53;6!CL:0000115;1.71e-41;36!CL:0002078;5.46e-22;45!CL:0000213;4.37e-21;58!CL:0000215;4.37e-21;58!CL:0000076;7.30e-17;63!CL:0002545;2.47e-11;2!CL:0002618;6.13e-08;3|ontology_enrichment_celltype_v019_2=CL:0000071,3.48e-88,18;CL:0002546,3.48e-88,18;CL:0002139,3.88e-66,24;CL:1000413,1.05e-54,9;CL:0002543,2.70e-53,6;CL:0002544,7.90e-53,6;CL:0000115,4.59e-44,36;CL:0002078,3.20e-35,45;CL:0000213,2.80e-27,58;CL:0000215,2.80e-27,58;CL:0000076,4.29e-25,63;CL:0000222,5.91e-16,121;CL:0002545,2.47e-11,2;CL:0002618,6.34e-08,3;CL:0002321,2.18e-07,250|ontology_enrichment_development_v019=CL:0002546;4.05e-88;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.31e-73!18;UBERON:0004638!1.31e-73!18;UBERON:0004852!1.31e-73!18;UBERON:0000487!2.18e-59!22;UBERON:0006914!1.04e-51!25;UBERON:0000055!6.64e-48!69;UBERON:0002049!6.65e-41!79;UBERON:0007798!6.65e-41!79;UBERON:0001981!6.21e-38!60;UBERON:0007500!6.21e-38!60;UBERON:0004537!6.21e-38!60;UBERON:0006965!6.21e-38!60;UBERON:0003915!7.35e-38!9;UBERON:0004700!7.35e-38!9;UBERON:0001917!7.35e-38!9;UBERON:0004872!1.06e-34!84;UBERON:0004535!1.76e-31!110;UBERON:0001009!1.94e-30!113;UBERON:0001637!7.99e-22!42;UBERON:0003509!7.99e-22!42;UBERON:0004572!7.99e-22!42;UBERON:0003914!2.52e-19!118;UBERON:0001638!5.87e-17!9;UBERON:0003920!5.87e-17!9;UBERON:0004582!5.87e-17!9;UBERON:0000490!6.26e-17!138;UBERON:0004111!3.44e-16!241;UBERON:0000025!2.33e-15!194;UBERON:0000477!3.46e-14!286;UBERON:0001915!4.52e-13!3;UBERON:0001982!4.52e-13!3;UBERON:0001473!6.74e-13!8;UBERON:0004536!6.74e-13!8;UBERON:0006558!6.74e-13!8;UBERON:0002465!2.95e-10!10;UBERON:0001310!7.29e-10!4;UBERON:0005800!9.64e-10!2;UBERON:0001515!9.64e-10!2;UBERON:0000483!1.00e-09!309;UBERON:0000119!1.49e-09!312;UBERON:0003081!3.38e-09!216;UBERON:0004573!8.08e-09!33;UBERON:0004571!8.08e-09!33;UBERON:0002066!3.33e-08!5;UBERON:0000947!6.74e-07!21;UBERON:0010191!6.74e-07!21|ontology_enrichment_uberon_v019=UBERON:0004638;4.05e-88;18!UBERON:0001986;4.05e-88;18!UBERON:0004852;4.05e-88;18!UBERON:0000487;4.24e-72;22!UBERON:0006914;1.92e-63;25!UBERON:0003915;1.31e-54;9!UBERON:0004700;1.31e-54;9!UBERON:0001917;1.31e-54;9!UBERON:0000490;2.37e-47;33!UBERON:0001638;9.15e-36;9!UBERON:0003920;9.15e-36;9!UBERON:0004582;9.15e-36;9!UBERON:0007500;3.62e-24;56!UBERON:0001981;3.62e-24;56!UBERON:0004537;3.62e-24;56!UBERON:0000055;1.76e-16;65!UBERON:0001637;4.17e-16;42!UBERON:0003509;4.17e-16;42!UBERON:0004572;4.17e-16;42!UBERON:0000947;1.81e-15;21!UBERON:0010191;1.81e-15;21!UBERON:0003914;1.18e-13;74!UBERON:0001009;4.95e-12;112!UBERON:0000025;8.07e-12;93!UBERON:0004535;1.02e-11;109!UBERON:0005800;2.47e-11;2!UBERON:0001515;2.47e-11;2!UBERON:0004573;4.52e-10;33!UBERON:0004571;4.52e-10;33!UBERON:0010260;9.65e-10;9!UBERON:0002049;6.67e-09;75!UBERON:0007798;6.67e-09;75|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.48e-88,18;UBERON:0001986,3.48e-88,18;UBERON:0004852,3.48e-88,18;UBERON:0000487,3.75e-72,22;UBERON:0006914,1.72e-63,25;UBERON:0003915,1.05e-54,9;UBERON:0004700,1.05e-54,9;UBERON:0001917,1.05e-54,9;UBERON:0001638,9.57e-36,9;UBERON:0003920,9.57e-36,9;UBERON:0004582,9.57e-36,9;UBERON:0007500,4.67e-33,59;UBERON:0001981,4.67e-33,59;UBERON:0004537,4.67e-33,59;UBERON:0006965,4.67e-33,59;UBERON:0000055,1.19e-28,68;UBERON:0002049,6.08e-25,78;UBERON:0007798,6.08e-25,78;UBERON:0004872,2.01e-23,83;UBERON:0004535,9.38e-18,109;UBERON:0001009,2.87e-17,112;UBERON:0001637,7.56e-17,42;UBERON:0003509,7.56e-17,42;UBERON:0004572,7.56e-17,42;UBERON:0003914,1.63e-16,117;UBERON:0000947,1.77e-15,21;UBERON:0010191,1.77e-15,21;UBERON:0000490,5.77e-13,148;UBERON:0005800,2.47e-11,2;UBERON:0001515,2.47e-11,2;UBERON:0004573,5.47e-10,33;UBERON:0004571,5.47e-10,33;UBERON:0000025,7.96e-10,192;UBERON:0010260,1.05e-09,9;UBERON:0003081,2.88e-09,203;UBERON:0004111,9.40e-08,240|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1695 | |||
|description=CAGE_peak_at_chr6:11607864..11607875,+ | |||
|id=chr6:11607864..11607875,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.88e-89!24;CL:0000071!1.31e-73!18;CL:0002546!1.31e-73!18;CL:0000115!3.41e-59!35;CL:0002078!7.10e-46!44;CL:1000413!7.35e-38!9;CL:0000213!2.92e-37!57;CL:0000215!2.92e-37!57;CL:0000222!1.23e-26!119;CL:0002544!6.44e-26!6;CL:0002543!9.02e-26!6;CL:0000076!9.57e-23!62;CL:0005020!2.72e-17!6;CL:0002138!2.72e-17!6;CL:0005022!2.72e-17!6;CL:0002618!2.15e-13!3;CL:0002144!4.52e-13!3;CL:0000220!1.34e-11!246;CL:0002321!1.91e-11!248;CL:0002594!7.29e-10!4;CL:0002545!9.64e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000071;4.05e-88;18!CL:0002139;4.34e-66;24!CL:1000413;1.31e-54;9!CL:0002543;2.53e-53;6!CL:0002544;8.45e-53;6!CL:0000115;1.71e-41;36!CL:0002078;5.46e-22;45!CL:0000213;4.37e-21;58!CL:0000215;4.37e-21;58!CL:0000076;7.30e-17;63!CL:0002545;2.47e-11;2!CL:0002618;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.48e-88,18;CL:0002546,3.48e-88,18;CL:0002139,3.88e-66,24;CL:1000413,1.05e-54,9;CL:0002543,2.70e-53,6;CL:0002544,7.90e-53,6;CL:0000115,4.59e-44,36;CL:0002078,3.20e-35,45;CL:0000213,2.80e-27,58;CL:0000215,2.80e-27,58;CL:0000076,4.29e-25,63;CL:0000222,5.91e-16,121;CL:0002545,2.47e-11,2;CL:0002618,6.34e-08,3;CL:0002321,2.18e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;4.05e-88;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.31e-73!18;UBERON:0004638!1.31e-73!18;UBERON:0004852!1.31e-73!18;UBERON:0000487!2.18e-59!22;UBERON:0006914!1.04e-51!25;UBERON:0000055!6.64e-48!69;UBERON:0002049!6.65e-41!79;UBERON:0007798!6.65e-41!79;UBERON:0001981!6.21e-38!60;UBERON:0007500!6.21e-38!60;UBERON:0004537!6.21e-38!60;UBERON:0006965!6.21e-38!60;UBERON:0003915!7.35e-38!9;UBERON:0004700!7.35e-38!9;UBERON:0001917!7.35e-38!9;UBERON:0004872!1.06e-34!84;UBERON:0004535!1.76e-31!110;UBERON:0001009!1.94e-30!113;UBERON:0001637!7.99e-22!42;UBERON:0003509!7.99e-22!42;UBERON:0004572!7.99e-22!42;UBERON:0003914!2.52e-19!118;UBERON:0001638!5.87e-17!9;UBERON:0003920!5.87e-17!9;UBERON:0004582!5.87e-17!9;UBERON:0000490!6.26e-17!138;UBERON:0004111!3.44e-16!241;UBERON:0000025!2.33e-15!194;UBERON:0000477!3.46e-14!286;UBERON:0001915!4.52e-13!3;UBERON:0001982!4.52e-13!3;UBERON:0001473!6.74e-13!8;UBERON:0004536!6.74e-13!8;UBERON:0006558!6.74e-13!8;UBERON:0002465!2.95e-10!10;UBERON:0001310!7.29e-10!4;UBERON:0005800!9.64e-10!2;UBERON:0001515!9.64e-10!2;UBERON:0000483!1.00e-09!309;UBERON:0000119!1.49e-09!312;UBERON:0003081!3.38e-09!216;UBERON:0004573!8.08e-09!33;UBERON:0004571!8.08e-09!33;UBERON:0002066!3.33e-08!5;UBERON:0000947!6.74e-07!21;UBERON:0010191!6.74e-07!21 | |||
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|short_description=p@chr6:11607864..11607875,+ | |||
}} |
Revision as of 17:32, 13 September 2013
Short description: | p@chr6:11607864..11607875, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:11607864..11607875, + |
Coexpression cluster: | C1695_Endothelial_Renal_Smooth_Hepatic_Natural_Eosinophils_mesodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.48e-88 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.48e-88 | 18 |
endothelial cell of vascular tree | 3.88e-66 | 24 |
endothelial cell of artery | 1.05e-54 | 9 |
vein endothelial cell | 2.70e-53 | 6 |
aortic endothelial cell | 7.90e-53 | 6 |
endothelial cell | 4.59e-44 | 36 |
meso-epithelial cell | 3.20e-35 | 45 |
lining cell | 2.80e-27 | 58 |
barrier cell | 2.80e-27 | 58 |
squamous epithelial cell | 4.29e-25 | 63 |
mesodermal cell | 5.91e-16 | 121 |
thoracic aorta endothelial cell | 2.47e-11 | 2 |
endothelial cell of umbilical vein | 6.34e-08 | 3 |
embryonic cell | 2.18e-07 | 250 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.