FFCP PHASE1:Mm9::chr19:37268555..37268557,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=82|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:37268555..37268557,-|id=chr19:37268555..37268557,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!2.69e-10!49;UBERON:0005173!2.69e-10!49;UBERON:0002417!2.69e-10!49;UBERON:0000916!2.69e-10!49;UBERON:0003914!2.35e-08!47;UBERON:0009569!5.22e-08!66;UBERON:0002107!6.04e-07!22;UBERON:0007499!6.04e-07!22;UBERON:0006925!6.04e-07!22;UBERON:0009497!6.04e-07!22;UBERON:0000015!6.04e-07!22;UBERON:0002423!6.04e-07!22;UBERON:0006235!6.04e-07!22;UBERON:0008835!6.04e-07!22;UBERON:0003894!6.04e-07!22;UBERON:0004161!6.04e-07!22;UBERON:0008836!6.04e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.89e-15,49;UBERON:0005173,2.89e-15,49;UBERON:0002417,2.89e-15,49;UBERON:0000916,2.89e-15,49;UBERON:0002107,1.26e-13,22;UBERON:0007499,1.26e-13,22;UBERON:0006925,1.26e-13,22;UBERON:0009497,1.26e-13,22;UBERON:0000015,1.26e-13,22;UBERON:0002423,1.26e-13,22;UBERON:0006235,1.26e-13,22;UBERON:0008835,1.26e-13,22;UBERON:0003894,1.26e-13,22;UBERON:0004161,1.26e-13,22;UBERON:0008836,1.26e-13,22;UBERON:0009854,5.41e-13,23;UBERON:0009856,5.41e-13,23;UBERON:0002365,7.06e-12,25;UBERON:0002330,7.06e-12,25;UBERON:0009569,7.86e-11,66;UBERON:0005177,1.02e-08,79;UBERON:0002106,2.92e-08,6;UBERON:0004457,2.92e-08,6;UBERON:0000042,2.92e-08,6;UBERON:0004854,2.92e-08,6;UBERON:0009034,2.92e-08,6;UBERON:0002095,2.92e-08,6;UBERON:0004782,2.92e-08,6;UBERON:0003281,2.92e-08,6;UBERON:0009664,2.92e-08,6;UBERON:0002296,2.92e-08,6;UBERON:0005602,2.92e-08,6;UBERON:0001179,2.92e-08,6;UBERON:0006293,2.92e-08,6;UBERON:0002100,2.09e-07,90;UBERON:0001041,2.64e-07,80|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0,0,0,0,1.72084775396277,0,0,1.29955283489534,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0,0,0.722996784599558,0.884610551949874,0,0.883366073841574,0.484875253135222,0,1.46390398505774,0.209446706813455,0,0.11981512450592,0,0,0,0,0.502617408451458,0.173824320192276,0,0.62336413367868,0.811206315338788,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.350296027101508,0.658239399653922,0.656669856316381,0.56748166682099,0.146199987425332,0.658650345873152,0.805238512562231,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0.257734922644187,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0.648414149624083,0.398282546508734,0.189667900953082,0.342745537829186,1.1270773567308,0.814605311381257,0.193952487167626,0.0701358198903186,0.252946148497029,0.442830443938806,0.941992367048249,1.23397163921801,0.889357881261447,0.83422552858047,0.393117990226406,1.79889689907883,0.202860121388503,3.37648023653384,1.78238096246994,0.575392274901621,1.29708181420028,0.823684239564244,7.18841032636773,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,1.4473305640901,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.630540576424764,0.44292937929755,0,0.491589944147214,0,0.433947175744535,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0.658196082408484,0,0,0.21183207086382,0,0.49465875882444,0,0.180938774784468,0,0.328281799490123,0.291480836629851,0.741701208042039,0.683483523191411,0.206386867963223,0.925972636848558,2.26042148405629,1.91371918809435,2.74533807847827,0.169978429993855,0.139951452323658,0.276399947608848,2.86401185404534,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0.675824501963113,0.117357238645754,0.2604087696879,0.419437377702843,0.483168241652012,3.16833006883652,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0.501572104035363,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0,0,0.45032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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=82 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:37268555..37268557,- | |||
|id=chr19:37268555..37268557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.69e-10!49;UBERON:0005173!2.69e-10!49;UBERON:0002417!2.69e-10!49;UBERON:0000916!2.69e-10!49;UBERON:0003914!2.35e-08!47;UBERON:0009569!5.22e-08!66;UBERON:0002107!6.04e-07!22;UBERON:0007499!6.04e-07!22;UBERON:0006925!6.04e-07!22;UBERON:0009497!6.04e-07!22;UBERON:0000015!6.04e-07!22;UBERON:0002423!6.04e-07!22;UBERON:0006235!6.04e-07!22;UBERON:0008835!6.04e-07!22;UBERON:0003894!6.04e-07!22;UBERON:0004161!6.04e-07!22;UBERON:0008836!6.04e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.89e-15,49;UBERON:0005173,2.89e-15,49;UBERON:0002417,2.89e-15,49;UBERON:0000916,2.89e-15,49;UBERON:0002107,1.26e-13,22;UBERON:0007499,1.26e-13,22;UBERON:0006925,1.26e-13,22;UBERON:0009497,1.26e-13,22;UBERON:0000015,1.26e-13,22;UBERON:0002423,1.26e-13,22;UBERON:0006235,1.26e-13,22;UBERON:0008835,1.26e-13,22;UBERON:0003894,1.26e-13,22;UBERON:0004161,1.26e-13,22;UBERON:0008836,1.26e-13,22;UBERON:0009854,5.41e-13,23;UBERON:0009856,5.41e-13,23;UBERON:0002365,7.06e-12,25;UBERON:0002330,7.06e-12,25;UBERON:0009569,7.86e-11,66;UBERON:0005177,1.02e-08,79;UBERON:0002106,2.92e-08,6;UBERON:0004457,2.92e-08,6;UBERON:0000042,2.92e-08,6;UBERON:0004854,2.92e-08,6;UBERON:0009034,2.92e-08,6;UBERON:0002095,2.92e-08,6;UBERON:0004782,2.92e-08,6;UBERON:0003281,2.92e-08,6;UBERON:0009664,2.92e-08,6;UBERON:0002296,2.92e-08,6;UBERON:0005602,2.92e-08,6;UBERON:0001179,2.92e-08,6;UBERON:0006293,2.92e-08,6;UBERON:0002100,2.09e-07,90;UBERON:0001041,2.64e-07,80 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0,0,0,0,1.72084775396277,0,0,1.29955283489534,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0,0,0.722996784599558,0.884610551949874,0,0.883366073841574,0.484875253135222,0,1.46390398505774,0.209446706813455,0,0.11981512450592,0,0,0,0,0.502617408451458,0.173824320192276,0,0.62336413367868,0.811206315338788,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.2562274405697,0.468508622798644,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.350296027101508,0.658239399653922,0.656669856316381,0.56748166682099,0.146199987425332,0.658650345873152,0.805238512562231,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0.257734922644187,0,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0.648414149624083,0.398282546508734,0.189667900953082,0.342745537829186,1.1270773567308,0.814605311381257,0.193952487167626,0.0701358198903186,0.252946148497029,0.442830443938806,0.941992367048249,1.23397163921801,0.889357881261447,0.83422552858047,0.393117990226406,1.79889689907883,0.202860121388503,3.37648023653384,1.78238096246994,0.575392274901621,1.29708181420028,0.823684239564244,7.18841032636773,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,1.4473305640901,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.630540576424764,0.44292937929755,0,0.491589944147214,0,0.433947175744535,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0.658196082408484,0,0,0.21183207086382,0,0.49465875882444,0,0.180938774784468,0,0.328281799490123,0.291480836629851,0.741701208042039,0.683483523191411,0.206386867963223,0.925972636848558,2.26042148405629,1.91371918809435,2.74533807847827,0.169978429993855,0.139951452323658,0.276399947608848,2.86401185404534,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0.675824501963113,0.117357238645754,0.2604087696879,0.419437377702843,0.483168241652012,3.16833006883652,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0.501572104035363,0,0.920650473014354,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0.341467211508268,0.729320151204882,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0.17230640686684,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.883193520806384,0,0,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0,0.818462086339379,0.619747364743864,0.385813221962283,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr19:37268555..37268557,- | |||
}} |
Revision as of 17:29, 13 September 2013
Short description: | p@chr19:37268555..37268557, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:37268555..37268557, - |
Coexpression cluster: | MCL_coexpression_mm9:82 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 2.89e-15 | 49 |
abdominal segment element | 2.89e-15 | 49 |
abdominal segment of trunk | 2.89e-15 | 49 |
abdomen | 2.89e-15 | 49 |
liver | 1.26e-13 | 22 |
epithelial sac | 1.26e-13 | 22 |
digestive gland | 1.26e-13 | 22 |
epithelium of foregut-midgut junction | 1.26e-13 | 22 |
anatomical boundary | 1.26e-13 | 22 |
hepatobiliary system | 1.26e-13 | 22 |
foregut-midgut junction | 1.26e-13 | 22 |
hepatic diverticulum | 1.26e-13 | 22 |
liver primordium | 1.26e-13 | 22 |
septum transversum | 1.26e-13 | 22 |
liver bud | 1.26e-13 | 22 |
digestive tract diverticulum | 5.41e-13 | 23 |
sac | 5.41e-13 | 23 |
exocrine gland | 7.06e-12 | 25 |
exocrine system | 7.06e-12 | 25 |
subdivision of trunk | 7.86e-11 | 66 |
trunk region element | 1.02e-08 | 79 |
spleen | 2.92e-08 | 6 |
cavity lining | 2.92e-08 | 6 |
serous membrane | 2.92e-08 | 6 |
gastrointestinal system mesentery | 2.92e-08 | 6 |
stomach region | 2.92e-08 | 6 |
mesentery | 2.92e-08 | 6 |
gastrointestinal system serosa | 2.92e-08 | 6 |
mesentery of stomach | 2.92e-08 | 6 |
gut mesentery | 2.92e-08 | 6 |
dorsal mesentery | 2.92e-08 | 6 |
dorsal mesogastrium | 2.92e-08 | 6 |
peritoneal cavity | 2.92e-08 | 6 |
spleen primordium | 2.92e-08 | 6 |
trunk | 2.09e-07 | 90 |
foregut | 2.64e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.