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FFCP PHASE1:Mm9::chr18:47528135..47528140,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20358|HGNC=|UniProt=D3YWM8|association_with_transcript=-33bp_to_ENSMUST00000135790_5end|description=CAGE_peak_7_at_Sema6a_5end|id=chr18:47528135..47528140,-|ontology_enrichment_celltype=CL:0000221!2.14e-09!44;CL:0000133!2.14e-09!44;CL:0002319!3.80e-09!43;CL:0000055!3.96e-08!50;CL:0000117!5.65e-07!23;CL:0000337!5.65e-07!23|ontology_enrichment_celltype_v019_2=CL:0002319,2.95e-11,43;CL:0000221,7.08e-11,44;CL:0000133,7.08e-11,44;CL:0000117,4.24e-10,23;CL:0000337,4.24e-10,23;CL:0000540,3.45e-07,33;CL:0000047,3.45e-07,33;CL:0000031,3.45e-07,33;CL:0000404,3.45e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.52e-13!75;UBERON:0001016!1.52e-13!75;UBERON:0004121!5.11e-13!102;UBERON:0000924!5.11e-13!102;UBERON:0006601!5.11e-13!102;UBERON:0001017!8.42e-13!73;UBERON:0005743!8.42e-13!73;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0001049!1.16e-09!52;UBERON:0005068!1.16e-09!52;UBERON:0006241!1.16e-09!52;UBERON:0007135!1.16e-09!52;UBERON:0002020!1.09e-08!34;UBERON:0000955!9.91e-08!50;UBERON:0006238!9.91e-08!50;UBERON:0002616!1.61e-07!49;UBERON:0003080!1.98e-07!40;UBERON:0000033!2.05e-07!63;UBERON:0002780!2.36e-07!39;UBERON:0001890!2.36e-07!39;UBERON:0006240!2.36e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.90e-10,75;UBERON:0001017,5.63e-10,73;UBERON:0001948,1.12e-09,5;UBERON:0002315,1.12e-09,5;UBERON:0004121,4.37e-09,95;UBERON:0000924,4.37e-09,95;UBERON:0006601,4.37e-09,95;UBERON:0000073,2.45e-08,54;UBERON:0002240,5.97e-08,6;UBERON:0005174,5.97e-08,6;UBERON:0001137,5.97e-08,6;UBERON:0002346,3.23e-07,64;UBERON:0003075,3.23e-07,64;UBERON:0007284,3.23e-07,64;UBERON:0001049,5.27e-07,52;UBERON:0005068,5.27e-07,52;UBERON:0006241,5.27e-07,52;UBERON:0007135,5.27e-07,52;UBERON:0002020,9.53e-07,34|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.183546752161682,0,3.2703773457067,0.659058548203415,2.72201858703997,2.2397827460058,2.87505128729943,0,0,0,0,0,0,2.83243045203437,0.528990979272033,3.1691570175309,0,0.889294796111139,0,0,0,1.19840044207362,0.768436610643109,0.414758449233911,1.08004750665353,0.420649922702764,4.28476476605705,1.76694832761291,0.367472397644862,2.97120960156533,0,0,1.65993539510744,1.0752457327937,0.923204014111357,7.68496206260241,0.52091337055676,0.558365998002762,0,1.22238598221448,4.12480019663135,3.13217697758026,2.98239113320481,1.28734528666413,0.68014404096107,2.31891590961342,0.860423876981386,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.22836775943812,0.258937883647172,0,1.04091196059682,1.21786191324856,0.461230994512117,0.60289056221049,0.823120949949934,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,0.251308704225729,0.521472960576829,0,0.83115217823824,1.1356888414743,0.101839363850316,0.622034853050465,0,0,3.513251959993,0,0,1.20563854268572,0.476255494059295,0.384341160854549,0.187403449119458,0,0.862271971731369,0.189106080167819,0.175951124163949,0.657587197282725,5.00485048606076,0,2.67516777330327,1.19420560091096,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,1.07309360559848,0,0,0.492502392237286,0.56748166682099,0.146199987425332,0.219550115291051,0.268412837520744,0,0.308713837137853,0,0.264450566663544,1.70630600428187,2.32236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,0,1.4822905925161,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0.199141273254367,0,1.25673363870702,0,0.407302655690628,0.969762435838129,0,0.252946148497029,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,1.11642284300551,0.312037673114561,0,0,0.964887042726734,0.739012760666419,0,0.162964976442026,1.01847051465113,0.938760993154008,0,0.476087281772027,0.390267295715598,0.315270288212382,1.32878813789265,0.159454768657487,0.327726629431476,1.03610989119537,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,1.05490517932983,0,0,0.631016438832513,1.95219372148319,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0.534196811001766,0.81443479676788,0.329940245945071,0,0.728341908464944,0,0.565815239267694,0,0,0.775284879504663,1.45413491791002,0,0,0,0,0,2.16073312837572,1.4229455216103,0.428674070063185,0,0.713475270408282,0.822745103010605,0.913394847343798,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.477489376012546,0.656563598980245,0.582961673259701,0.18542530201051,0,1.65109494370578,2.22233432843654,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.756037385752609,1.88179466413022,0.87345025498471,0.539457385539283,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,0,0.897099276263873,0.66183396182839,0.583353565032143,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0,0,0.405450430580328,0.513554785824136,0.51968329191118,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0.187682475451182,0,0,0,1.6942555278512,0.920650473014354,1.14579102687879,0.515559547031063,2.05524755931193,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0.51776031175182,0.93408612825759,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0.89635213366817,0.689225627467359,1.42888107384922,0.463537303779422,1.73618298417335,0.412085900803307,0.147198920134397,3.08582327146874,1.4198064492747,0.715308569841963,0.436039249896986,1.50575008664529,1.09998990259179,0.548783918618318,0.263069711437843,0,1.12228454331548,0.355905054372522,0.29551344712669,0,0.77468420592983,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p7@Sema6a}}
|EntrezGene=20358
|HGNC=
|UniProt=D3YWM8
|association_with_transcript=-33bp_to_ENSMUST00000135790_5end
|description=CAGE_peak_7_at_Sema6a_5end
|id=chr18:47528135..47528140,-
|ontology_enrichment_celltype=CL:0000221!2.14e-09!44;CL:0000133!2.14e-09!44;CL:0002319!3.80e-09!43;CL:0000055!3.96e-08!50;CL:0000117!5.65e-07!23;CL:0000337!5.65e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002319,2.95e-11,43;CL:0000221,7.08e-11,44;CL:0000133,7.08e-11,44;CL:0000117,4.24e-10,23;CL:0000337,4.24e-10,23;CL:0000540,3.45e-07,33;CL:0000047,3.45e-07,33;CL:0000031,3.45e-07,33;CL:0000404,3.45e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.52e-13!75;UBERON:0001016!1.52e-13!75;UBERON:0004121!5.11e-13!102;UBERON:0000924!5.11e-13!102;UBERON:0006601!5.11e-13!102;UBERON:0001017!8.42e-13!73;UBERON:0005743!8.42e-13!73;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0001049!1.16e-09!52;UBERON:0005068!1.16e-09!52;UBERON:0006241!1.16e-09!52;UBERON:0007135!1.16e-09!52;UBERON:0002020!1.09e-08!34;UBERON:0000955!9.91e-08!50;UBERON:0006238!9.91e-08!50;UBERON:0002616!1.61e-07!49;UBERON:0003080!1.98e-07!40;UBERON:0000033!2.05e-07!63;UBERON:0002780!2.36e-07!39;UBERON:0001890!2.36e-07!39;UBERON:0006240!2.36e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.90e-10,75;UBERON:0001017,5.63e-10,73;UBERON:0001948,1.12e-09,5;UBERON:0002315,1.12e-09,5;UBERON:0004121,4.37e-09,95;UBERON:0000924,4.37e-09,95;UBERON:0006601,4.37e-09,95;UBERON:0000073,2.45e-08,54;UBERON:0002240,5.97e-08,6;UBERON:0005174,5.97e-08,6;UBERON:0001137,5.97e-08,6;UBERON:0002346,3.23e-07,64;UBERON:0003075,3.23e-07,64;UBERON:0007284,3.23e-07,64;UBERON:0001049,5.27e-07,52;UBERON:0005068,5.27e-07,52;UBERON:0006241,5.27e-07,52;UBERON:0007135,5.27e-07,52;UBERON:0002020,9.53e-07,34
|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.183546752161682,0,3.2703773457067,0.659058548203415,2.72201858703997,2.2397827460058,2.87505128729943,0,0,0,0,0,0,2.83243045203437,0.528990979272033,3.1691570175309,0,0.889294796111139,0,0,0,1.19840044207362,0.768436610643109,0.414758449233911,1.08004750665353,0.420649922702764,4.28476476605705,1.76694832761291,0.367472397644862,2.97120960156533,0,0,1.65993539510744,1.0752457327937,0.923204014111357,7.68496206260241,0.52091337055676,0.558365998002762,0,1.22238598221448,4.12480019663135,3.13217697758026,2.98239113320481,1.28734528666413,0.68014404096107,2.31891590961342,0.860423876981386,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0.253359865475099,0,0.22836775943812,0.258937883647172,0,1.04091196059682,1.21786191324856,0.461230994512117,0.60289056221049,0.823120949949934,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,0.251308704225729,0.521472960576829,0,0.83115217823824,1.1356888414743,0.101839363850316,0.622034853050465,0,0,3.513251959993,0,0,1.20563854268572,0.476255494059295,0.384341160854549,0.187403449119458,0,0.862271971731369,0.189106080167819,0.175951124163949,0.657587197282725,5.00485048606076,0,2.67516777330327,1.19420560091096,0,0,0,0.207125772535502,0.938104239924385,0.720248245844059,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,1.07309360559848,0,0,0.492502392237286,0.56748166682099,0.146199987425332,0.219550115291051,0.268412837520744,0,0.308713837137853,0,0.264450566663544,1.70630600428187,2.32236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,0,1.4822905925161,0.502670417600539,0.795825888164603,0.19496408711912,0,0,0.199141273254367,0,1.25673363870702,0,0.407302655690628,0.969762435838129,0,0.252946148497029,0.147610147979602,0,0.370191491765402,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,1.11642284300551,0.312037673114561,0,0,0.964887042726734,0.739012760666419,0,0.162964976442026,1.01847051465113,0.938760993154008,0,0.476087281772027,0.390267295715598,0.315270288212382,1.32878813789265,0.159454768657487,0.327726629431476,1.03610989119537,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,1.05490517932983,0,0,0.631016438832513,1.95219372148319,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0.534196811001766,0.81443479676788,0.329940245945071,0,0.728341908464944,0,0.565815239267694,0,0,0.775284879504663,1.45413491791002,0,0,0,0,0,2.16073312837572,1.4229455216103,0.428674070063185,0,0.713475270408282,0.822745103010605,0.913394847343798,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.477489376012546,0.656563598980245,0.582961673259701,0.18542530201051,0,1.65109494370578,2.22233432843654,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.756037385752609,1.88179466413022,0.87345025498471,0.539457385539283,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,0,0.897099276263873,0.66183396182839,0.583353565032143,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0,0,0.405450430580328,0.513554785824136,0.51968329191118,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0.187682475451182,0,0,0,1.6942555278512,0.920650473014354,1.14579102687879,0.515559547031063,2.05524755931193,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0.51776031175182,0.93408612825759,0.399024873401031,0.341467211508268,0.486213434136588,0,0,0,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0.89635213366817,0.689225627467359,1.42888107384922,0.463537303779422,1.73618298417335,0.412085900803307,0.147198920134397,3.08582327146874,1.4198064492747,0.715308569841963,0.436039249896986,1.50575008664529,1.09998990259179,0.548783918618318,0.263069711437843,0,1.12228454331548,0.355905054372522,0.29551344712669,0,0.77468420592983,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p7@Sema6a
}}

Revision as of 16:17, 13 September 2013

Short description:p7@Sema6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Sema6a_5end
Coexpression cluster:NA
Association with transcript: -33bp_to_ENSMUST00000135790_5end
EntrezGene:Sema6a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p7@Sema6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell2.95e-1143
ectodermal cell7.08e-1144
neurectodermal cell7.08e-1144
CNS neuron (sensu Vertebrata)4.24e-1023
neuroblast (sensu Vertebrata)4.24e-1023
neuron3.45e-0733
neuronal stem cell3.45e-0733
neuroblast3.45e-0733
electrically signaling cell3.45e-0733

Uber anatomy
Ontology termp-valuen
nervous system1.90e-1075
central nervous system5.63e-1073
regional part of spinal cord1.12e-095
gray matter of spinal cord1.12e-095
ectoderm-derived structure4.37e-0995
ectoderm4.37e-0995
presumptive ectoderm4.37e-0995
regional part of nervous system2.45e-0854
spinal cord5.97e-086
dorsal region element5.97e-086
dorsum5.97e-086
neurectoderm3.23e-0764
neural plate3.23e-0764
presumptive neural plate3.23e-0764
neural tube5.27e-0752
neural rod5.27e-0752
future spinal cord5.27e-0752
neural keel5.27e-0752
gray matter9.53e-0734







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