FFCP PHASE1:Mm9::chr18:46385680..46385688,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=28|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:46385680..46385688,+|id=chr18:46385680..46385688,+|ontology_enrichment_celltype=CL:0002563!1.57e-08!9;CL:0002251!1.57e-08!9;CL:0002250!3.37e-07!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.93e-13!59;UBERON:0000160!1.74e-11!43;UBERON:0001242!6.23e-09!13;UBERON:0000060!6.23e-09!13;UBERON:0001262!6.23e-09!13;UBERON:0004786!6.23e-09!13;UBERON:0003350!1.57e-08!9;UBERON:0004808!1.57e-08!9;UBERON:0001277!1.57e-08!9;UBERON:0000344!1.02e-07!15;UBERON:0004921!5.16e-07!126;UBERON:0004185!5.16e-07!126;UBERON:0000485!5.30e-07!11;UBERON:0001007!7.30e-07!128;UBERON:0001555!7.30e-07!128;UBERON:0007026!7.30e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.07e-11,9;UBERON:0000019,8.07e-11,9;UBERON:0000047,8.07e-11,9;UBERON:0010312,8.07e-11,9;UBERON:0004088,8.07e-11,9;UBERON:0002104,8.07e-11,9;UBERON:0001456,8.07e-11,9;UBERON:0003072,8.07e-11,9;UBERON:0004128,8.07e-11,9;UBERON:0003071,8.07e-11,9;UBERON:0001444,4.82e-09,11;UBERON:0000020,2.25e-08,12;UBERON:0001032,2.25e-08,12;UBERON:0004456,2.25e-08,12;UBERON:0000033,8.31e-08,13;UBERON:0005085,8.31e-08,13|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57590681191306,0,0,0,0,0,0,0,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0.0826534557253359,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:46385680..46385688,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:46385680..46385688,+ | |||
|id=chr18:46385680..46385688,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.57e-08!9;CL:0002251!1.57e-08!9;CL:0002250!3.37e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.93e-13!59;UBERON:0000160!1.74e-11!43;UBERON:0001242!6.23e-09!13;UBERON:0000060!6.23e-09!13;UBERON:0001262!6.23e-09!13;UBERON:0004786!6.23e-09!13;UBERON:0003350!1.57e-08!9;UBERON:0004808!1.57e-08!9;UBERON:0001277!1.57e-08!9;UBERON:0000344!1.02e-07!15;UBERON:0004921!5.16e-07!126;UBERON:0004185!5.16e-07!126;UBERON:0000485!5.30e-07!11;UBERON:0001007!7.30e-07!128;UBERON:0001555!7.30e-07!128;UBERON:0007026!7.30e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.07e-11,9;UBERON:0000019,8.07e-11,9;UBERON:0000047,8.07e-11,9;UBERON:0010312,8.07e-11,9;UBERON:0004088,8.07e-11,9;UBERON:0002104,8.07e-11,9;UBERON:0001456,8.07e-11,9;UBERON:0003072,8.07e-11,9;UBERON:0004128,8.07e-11,9;UBERON:0003071,8.07e-11,9;UBERON:0001444,4.82e-09,11;UBERON:0000020,2.25e-08,12;UBERON:0001032,2.25e-08,12;UBERON:0004456,2.25e-08,12;UBERON:0000033,8.31e-08,13;UBERON:0005085,8.31e-08,13 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430942465371778,0.380046838912748,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57590681191306,0,0,0,0,0,0,0,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0.0826534557253359,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:46385680..46385688,+ | |||
}} |
Revision as of 16:16, 13 September 2013
Short description: | p@chr18:46385680..46385688, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:46385680..46385688, + |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 8.07e-11 | 9 |
camera-type eye | 8.07e-11 | 9 |
simple eye | 8.07e-11 | 9 |
immature eye | 8.07e-11 | 9 |
ocular region | 8.07e-11 | 9 |
visual system | 8.07e-11 | 9 |
face | 8.07e-11 | 9 |
optic cup | 8.07e-11 | 9 |
optic vesicle | 8.07e-11 | 9 |
eye primordium | 8.07e-11 | 9 |
subdivision of head | 4.82e-09 | 11 |
sense organ | 2.25e-08 | 12 |
sensory system | 2.25e-08 | 12 |
entire sense organ system | 2.25e-08 | 12 |
head | 8.31e-08 | 13 |
ectodermal placode | 8.31e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.