FFCP PHASE1:Mm9::chr18:32109225..32109242,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=574402|HGNC=|MCL_coexpression_id=293|UniProt=Q6NS65|association_with_transcript=47bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end|description=CAGE_peak_1_at_Gpr17_5end|id=chr18:32109225..32109242,-|ontology_enrichment_celltype=CL:0000540!3.57e-16!33;CL:0000047!3.57e-16!33;CL:0000031!3.57e-16!33;CL:0000404!3.57e-16!33;CL:0000117!1.66e-15!23;CL:0000337!1.66e-15!23;CL:0000221!3.50e-13!44;CL:0000133!3.50e-13!44;CL:0002319!6.29e-13!43;CL:0000393!6.15e-12!39;CL:0000211!6.15e-12!39;CL:0000055!1.72e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.74e-18,23;CL:0000337,2.74e-18,23;CL:0000540,4.70e-13,33;CL:0000047,4.70e-13,33;CL:0000031,4.70e-13,33;CL:0000404,4.70e-13,33;CL:0002319,7.26e-11,43;CL:0000221,1.87e-10,44;CL:0000133,1.87e-10,44;CL:0000393,5.14e-10,39;CL:0000211,5.14e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.93e-30!73;UBERON:0005743!7.93e-30!73;UBERON:0000073!3.11e-29!75;UBERON:0001016!3.11e-29!75;UBERON:0001049!1.09e-22!52;UBERON:0005068!1.09e-22!52;UBERON:0006241!1.09e-22!52;UBERON:0007135!1.09e-22!52;UBERON:0004121!1.31e-22!102;UBERON:0000924!1.31e-22!102;UBERON:0006601!1.31e-22!102;UBERON:0002020!1.27e-21!34;UBERON:0000955!8.10e-21!50;UBERON:0006238!8.10e-21!50;UBERON:0002346!1.05e-20!71;UBERON:0003075!1.05e-20!71;UBERON:0007284!1.05e-20!71;UBERON:0002616!4.86e-20!49;UBERON:0000033!7.91e-19!63;UBERON:0002791!4.00e-17!29;UBERON:0003528!4.00e-17!29;UBERON:0001893!4.00e-17!29;UBERON:0003080!4.57e-16!40;UBERON:0003056!1.18e-15!49;UBERON:0002780!2.68e-15!39;UBERON:0001890!2.68e-15!39;UBERON:0006240!2.68e-15!39;UBERON:0000956!1.05e-11!21;UBERON:0001869!1.05e-11!21;UBERON:0000203!1.05e-11!21;UBERON:0002619!2.74e-10!17;UBERON:0007811!9.62e-10!86;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0000153!1.64e-08!94;UBERON:0003076!2.39e-07!12;UBERON:0003057!2.39e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.02e-31,73;UBERON:0000073,1.07e-29,54;UBERON:0001016,1.56e-29,75;UBERON:0002020,2.35e-27,34;UBERON:0001049,2.59e-27,52;UBERON:0005068,2.59e-27,52;UBERON:0006241,2.59e-27,52;UBERON:0007135,2.59e-27,52;UBERON:0000955,1.38e-21,47;UBERON:0006238,1.38e-21,47;UBERON:0004121,2.91e-21,95;UBERON:0000924,2.91e-21,95;UBERON:0006601,2.91e-21,95;UBERON:0002346,3.28e-21,64;UBERON:0003075,3.28e-21,64;UBERON:0007284,3.28e-21,64;UBERON:0003528,3.49e-21,29;UBERON:0002791,3.49e-21,29;UBERON:0001893,3.49e-21,29;UBERON:0002616,1.39e-20,46;UBERON:0003080,6.05e-18,40;UBERON:0010371,4.80e-17,73;UBERON:0002780,6.15e-17,39;UBERON:0001890,6.15e-17,39;UBERON:0006240,6.15e-17,39;UBERON:0002619,2.84e-14,17;UBERON:0003056,3.04e-14,49;UBERON:0000956,9.52e-14,21;UBERON:0001869,9.52e-14,21;UBERON:0000203,9.52e-14,21;UBERON:0002021,7.28e-13,10;UBERON:0000411,7.28e-13,10;UBERON:0001950,7.28e-13,10;UBERON:0010314,4.71e-11,92;UBERON:0003076,3.70e-10,12;UBERON:0003057,3.70e-10,12;UBERON:0002420,8.79e-09,8;UBERON:0007245,8.79e-09,8;UBERON:0010009,8.79e-09,8;UBERON:0010011,8.79e-09,8;UBERON:0000454,8.79e-09,8;UBERON:0002240,1.52e-08,6;UBERON:0005174,1.52e-08,6;UBERON:0001137,1.52e-08,6;UBERON:0001948,1.34e-07,5;UBERON:0002315,1.34e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,5.81890077199236,1.26766280701236,0,0,0,0,0,42.8428158041319,29.9690278150813,0.518448061542388,0.270011876663381,1.05162480675691,123.401225262443,137.821969553807,2.44981598429908,1.62937300731002,3.67687514644008,35.2370819198044,25.154405602782,22.8873734551803,1.71452174049252,1.82975287204819,2.6045668527838,18.1468949350898,14.069065250792,32.8516232720142,72.7732606119959,78.3044244395066,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,0,4.68449275218475,17.3840766655168,0,0,0,0,26.213361895844,31.1100409916666,10.4293112253677,20.6850941028809,37.5901722275586,35.3239675751252,61.9761624918834,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.749613796477831,8.2785078636485,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5524742391823,2.05809224758569,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,26.4908473479857,77.3597131508541,0,0,0.631016438832513,0.780877488593277,0.430846795465598,0.955875191810208,1.33679204449436,1.69845918473299,0,0.876767573733936,0.790575555893047,22.4924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0.913394847343798,0,0,0,0,0,0,0.119372344003136,0,0,15.9465759729038,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.2307911334965,76.8743144966985,107.131461013167,71.3190706726303,33.5690434687615,21.9064230243013,23.6257875081132,17.1122057225204,14.0474146785103,21.2281727818246,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.551530525350042,1.77797382241292,2.06035057238894,2.24643446714271,1.76888048234658,2.02783439912192,1.32038438970253,2.24739617927718,1.92075457214608,1.26358031702349,0.952587382566147,1.73826488917283,0.578727661391115,2.06042950401653,2.20798380201596,1.71434626192708,1.59728225543404,1.66905332963125,1.0174249164263,1.41164070622996,1.4384483341585,0.548783918618318,2.63069711437843,1.7654534799962,1.68342681497322,1.66089025373844,1.47756723563345,1.22769312950907,1.54936841185966,0.964533054905707,3.49734809113124,2.10538447600868,1.50409737833809,0.956441660344217,4.41182838239031,6.26043156175138|short_description=p1@Gpr17}} | ||
|EntrezGene=574402 | |||
|HGNC= | |||
|MCL_coexpression_id=293 | |||
|UniProt=Q6NS65 | |||
|association_with_transcript=47bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end | |||
|description=CAGE_peak_1_at_Gpr17_5end | |||
|id=chr18:32109225..32109242,- | |||
|ontology_enrichment_celltype=CL:0000540!3.57e-16!33;CL:0000047!3.57e-16!33;CL:0000031!3.57e-16!33;CL:0000404!3.57e-16!33;CL:0000117!1.66e-15!23;CL:0000337!1.66e-15!23;CL:0000221!3.50e-13!44;CL:0000133!3.50e-13!44;CL:0002319!6.29e-13!43;CL:0000393!6.15e-12!39;CL:0000211!6.15e-12!39;CL:0000055!1.72e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.74e-18,23;CL:0000337,2.74e-18,23;CL:0000540,4.70e-13,33;CL:0000047,4.70e-13,33;CL:0000031,4.70e-13,33;CL:0000404,4.70e-13,33;CL:0002319,7.26e-11,43;CL:0000221,1.87e-10,44;CL:0000133,1.87e-10,44;CL:0000393,5.14e-10,39;CL:0000211,5.14e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.93e-30!73;UBERON:0005743!7.93e-30!73;UBERON:0000073!3.11e-29!75;UBERON:0001016!3.11e-29!75;UBERON:0001049!1.09e-22!52;UBERON:0005068!1.09e-22!52;UBERON:0006241!1.09e-22!52;UBERON:0007135!1.09e-22!52;UBERON:0004121!1.31e-22!102;UBERON:0000924!1.31e-22!102;UBERON:0006601!1.31e-22!102;UBERON:0002020!1.27e-21!34;UBERON:0000955!8.10e-21!50;UBERON:0006238!8.10e-21!50;UBERON:0002346!1.05e-20!71;UBERON:0003075!1.05e-20!71;UBERON:0007284!1.05e-20!71;UBERON:0002616!4.86e-20!49;UBERON:0000033!7.91e-19!63;UBERON:0002791!4.00e-17!29;UBERON:0003528!4.00e-17!29;UBERON:0001893!4.00e-17!29;UBERON:0003080!4.57e-16!40;UBERON:0003056!1.18e-15!49;UBERON:0002780!2.68e-15!39;UBERON:0001890!2.68e-15!39;UBERON:0006240!2.68e-15!39;UBERON:0000956!1.05e-11!21;UBERON:0001869!1.05e-11!21;UBERON:0000203!1.05e-11!21;UBERON:0002619!2.74e-10!17;UBERON:0007811!9.62e-10!86;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0000153!1.64e-08!94;UBERON:0003076!2.39e-07!12;UBERON:0003057!2.39e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.02e-31,73;UBERON:0000073,1.07e-29,54;UBERON:0001016,1.56e-29,75;UBERON:0002020,2.35e-27,34;UBERON:0001049,2.59e-27,52;UBERON:0005068,2.59e-27,52;UBERON:0006241,2.59e-27,52;UBERON:0007135,2.59e-27,52;UBERON:0000955,1.38e-21,47;UBERON:0006238,1.38e-21,47;UBERON:0004121,2.91e-21,95;UBERON:0000924,2.91e-21,95;UBERON:0006601,2.91e-21,95;UBERON:0002346,3.28e-21,64;UBERON:0003075,3.28e-21,64;UBERON:0007284,3.28e-21,64;UBERON:0003528,3.49e-21,29;UBERON:0002791,3.49e-21,29;UBERON:0001893,3.49e-21,29;UBERON:0002616,1.39e-20,46;UBERON:0003080,6.05e-18,40;UBERON:0010371,4.80e-17,73;UBERON:0002780,6.15e-17,39;UBERON:0001890,6.15e-17,39;UBERON:0006240,6.15e-17,39;UBERON:0002619,2.84e-14,17;UBERON:0003056,3.04e-14,49;UBERON:0000956,9.52e-14,21;UBERON:0001869,9.52e-14,21;UBERON:0000203,9.52e-14,21;UBERON:0002021,7.28e-13,10;UBERON:0000411,7.28e-13,10;UBERON:0001950,7.28e-13,10;UBERON:0010314,4.71e-11,92;UBERON:0003076,3.70e-10,12;UBERON:0003057,3.70e-10,12;UBERON:0002420,8.79e-09,8;UBERON:0007245,8.79e-09,8;UBERON:0010009,8.79e-09,8;UBERON:0010011,8.79e-09,8;UBERON:0000454,8.79e-09,8;UBERON:0002240,1.52e-08,6;UBERON:0005174,1.52e-08,6;UBERON:0001137,1.52e-08,6;UBERON:0001948,1.34e-07,5;UBERON:0002315,1.34e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,5.81890077199236,1.26766280701236,0,0,0,0,0,42.8428158041319,29.9690278150813,0.518448061542388,0.270011876663381,1.05162480675691,123.401225262443,137.821969553807,2.44981598429908,1.62937300731002,3.67687514644008,35.2370819198044,25.154405602782,22.8873734551803,1.71452174049252,1.82975287204819,2.6045668527838,18.1468949350898,14.069065250792,32.8516232720142,72.7732606119959,78.3044244395066,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,0,4.68449275218475,17.3840766655168,0,0,0,0,26.213361895844,31.1100409916666,10.4293112253677,20.6850941028809,37.5901722275586,35.3239675751252,61.9761624918834,0,0,0,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.749613796477831,8.2785078636485,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5524742391823,2.05809224758569,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,26.4908473479857,77.3597131508541,0,0,0.631016438832513,0.780877488593277,0.430846795465598,0.955875191810208,1.33679204449436,1.69845918473299,0,0.876767573733936,0.790575555893047,22.4924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0.913394847343798,0,0,0,0,0,0,0.119372344003136,0,0,15.9465759729038,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.2307911334965,76.8743144966985,107.131461013167,71.3190706726303,33.5690434687615,21.9064230243013,23.6257875081132,17.1122057225204,14.0474146785103,21.2281727818246,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.551530525350042,1.77797382241292,2.06035057238894,2.24643446714271,1.76888048234658,2.02783439912192,1.32038438970253,2.24739617927718,1.92075457214608,1.26358031702349,0.952587382566147,1.73826488917283,0.578727661391115,2.06042950401653,2.20798380201596,1.71434626192708,1.59728225543404,1.66905332963125,1.0174249164263,1.41164070622996,1.4384483341585,0.548783918618318,2.63069711437843,1.7654534799962,1.68342681497322,1.66089025373844,1.47756723563345,1.22769312950907,1.54936841185966,0.964533054905707,3.49734809113124,2.10538447600868,1.50409737833809,0.956441660344217,4.41182838239031,6.26043156175138 | |||
|short_description=p1@Gpr17 | |||
}} |
Revision as of 15:53, 13 September 2013
Short description: | p1@Gpr17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpr17_5end |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | 47bp_to_ENSMUST00000064016, NM_001025381, uc008eiw.2_5end |
EntrezGene: | Gpr17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.74e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.74e-18 | 23 |
neuron | 4.70e-13 | 33 |
neuronal stem cell | 4.70e-13 | 33 |
neuroblast | 4.70e-13 | 33 |
electrically signaling cell | 4.70e-13 | 33 |
neural cell | 7.26e-11 | 43 |
ectodermal cell | 1.87e-10 | 44 |
neurectodermal cell | 1.87e-10 | 44 |
electrically responsive cell | 5.14e-10 | 39 |
electrically active cell | 5.14e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.