FFCP PHASE1:Mm9::chr17:87682111..87682126,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=386|UniProt=|association_with_transcript=0bp_to_ENSMUST00000161759_5end|description=CAGE_peak_1_at_ENSMUST00000161759_5end|id=chr17:87682111..87682126,-|ontology_enrichment_celltype=CL:0000066!4.94e-08!25;CL:0000063!2.36e-07!66|ontology_enrichment_celltype_v019_2=CL:0000066,2.33e-08,25;CL:0000223,5.09e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.66e-09!15;UBERON:0001242!2.81e-08!13;UBERON:0000060!2.81e-08!13;UBERON:0001262!2.81e-08!13;UBERON:0004786!2.81e-08!13;UBERON:0000160!3.28e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.64e-12,31;UBERON:0000344,2.62e-09,15;UBERON:0001242,2.09e-08,13;UBERON:0001262,2.09e-08,13;UBERON:0004786,2.09e-08,13;UBERON:0005409,3.91e-07,47|phase1_expression=2.40223270657191,23.7303277194766,18.654968814971,49.3016664430133,54.5976345641518,7.72244650794693,7.47560449905682,10.5881125222093,2.67498572088167,3.5109678948299,1.88339765048055,0.638177271962691,5.64962408772979,4.28359971853087,1.66554880907831,0.809901069559304,1.39912375625629,2.20823515750766,1.91960207048034,3.81950686618227,1.9559956734746,3.27660138962921,2.35079810225042,5.43974237497583,10.3234176480227,20.0981187440257,12.4920978886132,11.2045040996662,6.65081968097309,7.30887376303799,5.98672378769323,7.62036808151557,6.1506478758457,0,9.53210345179206,5.81821258754723,6.32925004413344,16.3227335987394,12.5013655123808,9.94695113550217,26.4704169613956,13.6609096991689,6.311634589405,5.03587271902309,6.79225439170748,7.34187008646726,0.782391344348039,1.30815093828268,1.75748946187577,1.94429899074283,1.39986421625363,0,4.69791296961662,2.17608642603403,1.68046899571232,1.54355661621568,2.0057340795713,4.64104883049698,1.01158230429799,1.05798195854407,0.633831403506179,0.677689064138264,1.77858959222228,3.5995988691256,3.9554654502679,1.4209602298922,2.39680088414724,0.384218305321555,9.85051316930538,8.6403800532282,7.36137364729837,0,1.10434270475807,5.14461356702807,7.28425579738596,6.43453150627015,1.10115880999389,0.510749352340751,0.46081959976873,0.527545150920775,0.914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,0,0.996601765593721,0.559198337475902,0.832988126665025,1.43585964202892,20.8702431865208,0.860423876981386,1.3599426674155,6.47643829965381,7.14754059192436,6.2723764193627,4.21333260395256,3.40860645156115,3.11743205523443,4.24007489412408,1.83096445709685,3.84979432242953,0,7.11066703153331,1.94841936910093,3.29367825117628,3.0331466700887,5.48082622651488,0.517875767294343,2.07818994690755,1.21439728736295,0.304465478312141,1.15307748628029,1.65794904607885,2.58695155698551,2.01066546127481,4.6967043869531,2.89198713839823,2.65383165584962,3.07357014900077,2.87093973998512,5.81850303762267,3.72783522436244,0.585561594023094,0.41889341362691,9.19645398750929,7.6681679683789,10.7982491578813,7.37007317023775,0.149790639404823,0.457500602818626,0.502617408451458,1.04294592115366,1.02286182932132,0.41557608911912,0.648965052271031,1.83310854930569,4.22983700074316,2.27450482590307,2.94618598241064,0.520481771850815,2.75882525320168,2.34080768746954,3.16480117455002,2.24520447199382,2.43416068541215,1.59292931751539,1.29351685369508,0.646703978798527,0.756424320671277,1.40760899331159,1.53437012699302,1.94633074457919,4.179025998266,2.67516777330327,1.79130840136644,7.72434506044558,5.91900186363845,5.39910648851626,0.207125772535502,0.469052119962192,0.36012412292203,0,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,0.934122738937356,0.822799249567402,1.14917224855367,1.4592385718254,2.77779976108131,2.19550115291051,2.81833479396781,0.630869845692382,0.514523061896422,12.8863325363681,7.66906643324278,1.49301775374664,0.464473343720877,1.9330119198314,4.63872106633688,5.78182913996663,3.23383564391351,9.96511029243474,4.94096864172033,4.52403375840485,4.17808591286417,3.8992817423824,9.88701349519644,5.83572734661674,10.7536287557358,1.13800740571849,0.913988100877831,2.25415471346161,1.22190796707189,1.74557238450863,2.87556861550306,3.54124607895841,4.42830443938806,5.96595165797224,8.14421281883883,5.92905254174298,0.667380422864376,0.786235980452812,0.224862112384854,2.02860121388503,2.65294875727659,2.80088436959562,2.30156909960649,3.08056930872567,3.0201755450689,1.43768206527355,2.97712758134803,4.05648975048929,3.28352541331245,4.4849353380478,11.0962009913574,4.43407656399851,0.757965647081939,0.325929952884052,1.01847051465113,0.704070744865506,3.01511263395268,4.52282917683426,4.68320754858717,3.78324345854858,3.76489972402917,2.87018583583477,3.4411296090305,2.93564469172023,5.93061140184197,0,1.08781136763742,1.96705709207614,3.03530420935206,0.642202359951168,0.35163505977661,1.63934945376675,9.84636616097055,0.94652465824877,1.95219372148319,1.50796378412959,0.955875191810208,2.45078541490634,0.849229592366497,2.02405350837447,2.04579100537918,2.37172666767914,0.963963949265421,1.70328102249922,1.780656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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000161759_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000161759_5end | |||
|id=chr17:87682111..87682126,- | |||
|ontology_enrichment_celltype=CL:0000066!4.94e-08!25;CL:0000063!2.36e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.33e-08,25;CL:0000223,5.09e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.66e-09!15;UBERON:0001242!2.81e-08!13;UBERON:0000060!2.81e-08!13;UBERON:0001262!2.81e-08!13;UBERON:0004786!2.81e-08!13;UBERON:0000160!3.28e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.64e-12,31;UBERON:0000344,2.62e-09,15;UBERON:0001242,2.09e-08,13;UBERON:0001262,2.09e-08,13;UBERON:0004786,2.09e-08,13;UBERON:0005409,3.91e-07,47 | |||
|phase1_expression=2.40223270657191,23.7303277194766,18.654968814971,49.3016664430133,54.5976345641518,7.72244650794693,7.47560449905682,10.5881125222093,2.67498572088167,3.5109678948299,1.88339765048055,0.638177271962691,5.64962408772979,4.28359971853087,1.66554880907831,0.809901069559304,1.39912375625629,2.20823515750766,1.91960207048034,3.81950686618227,1.9559956734746,3.27660138962921,2.35079810225042,5.43974237497583,10.3234176480227,20.0981187440257,12.4920978886132,11.2045040996662,6.65081968097309,7.30887376303799,5.98672378769323,7.62036808151557,6.1506478758457,0,9.53210345179206,5.81821258754723,6.32925004413344,16.3227335987394,12.5013655123808,9.94695113550217,26.4704169613956,13.6609096991689,6.311634589405,5.03587271902309,6.79225439170748,7.34187008646726,0.782391344348039,1.30815093828268,1.75748946187577,1.94429899074283,1.39986421625363,0,4.69791296961662,2.17608642603403,1.68046899571232,1.54355661621568,2.0057340795713,4.64104883049698,1.01158230429799,1.05798195854407,0.633831403506179,0.677689064138264,1.77858959222228,3.5995988691256,3.9554654502679,1.4209602298922,2.39680088414724,0.384218305321555,9.85051316930538,8.6403800532282,7.36137364729837,0,1.10434270475807,5.14461356702807,7.28425579738596,6.43453150627015,1.10115880999389,0.510749352340751,0.46081959976873,0.527545150920775,0.914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,0,0.996601765593721,0.559198337475902,0.832988126665025,1.43585964202892,20.8702431865208,0.860423876981386,1.3599426674155,6.47643829965381,7.14754059192436,6.2723764193627,4.21333260395256,3.40860645156115,3.11743205523443,4.24007489412408,1.83096445709685,3.84979432242953,0,7.11066703153331,1.94841936910093,3.29367825117628,3.0331466700887,5.48082622651488,0.517875767294343,2.07818994690755,1.21439728736295,0.304465478312141,1.15307748628029,1.65794904607885,2.58695155698551,2.01066546127481,4.6967043869531,2.89198713839823,2.65383165584962,3.07357014900077,2.87093973998512,5.81850303762267,3.72783522436244,0.585561594023094,0.41889341362691,9.19645398750929,7.6681679683789,10.7982491578813,7.37007317023775,0.149790639404823,0.457500602818626,0.502617408451458,1.04294592115366,1.02286182932132,0.41557608911912,0.648965052271031,1.83310854930569,4.22983700074316,2.27450482590307,2.94618598241064,0.520481771850815,2.75882525320168,2.34080768746954,3.16480117455002,2.24520447199382,2.43416068541215,1.59292931751539,1.29351685369508,0.646703978798527,0.756424320671277,1.40760899331159,1.53437012699302,1.94633074457919,4.179025998266,2.67516777330327,1.79130840136644,7.72434506044558,5.91900186363845,5.39910648851626,0.207125772535502,0.469052119962192,0.36012412292203,0,0.787056926989615,0.308534225774757,0.465067889500816,0.536546802799238,0.934122738937356,0.822799249567402,1.14917224855367,1.4592385718254,2.77779976108131,2.19550115291051,2.81833479396781,0.630869845692382,0.514523061896422,12.8863325363681,7.66906643324278,1.49301775374664,0.464473343720877,1.9330119198314,4.63872106633688,5.78182913996663,3.23383564391351,9.96511029243474,4.94096864172033,4.52403375840485,4.17808591286417,3.8992817423824,9.88701349519644,5.83572734661674,10.7536287557358,1.13800740571849,0.913988100877831,2.25415471346161,1.22190796707189,1.74557238450863,2.87556861550306,3.54124607895841,4.42830443938806,5.96595165797224,8.14421281883883,5.92905254174298,0.667380422864376,0.786235980452812,0.224862112384854,2.02860121388503,2.65294875727659,2.80088436959562,2.30156909960649,3.08056930872567,3.0201755450689,1.43768206527355,2.97712758134803,4.05648975048929,3.28352541331245,4.4849353380478,11.0962009913574,4.43407656399851,0.757965647081939,0.325929952884052,1.01847051465113,0.704070744865506,3.01511263395268,4.52282917683426,4.68320754858717,3.78324345854858,3.76489972402917,2.87018583583477,3.4411296090305,2.93564469172023,5.93061140184197,0,1.08781136763742,1.96705709207614,3.03530420935206,0.642202359951168,0.35163505977661,1.63934945376675,9.84636616097055,0.94652465824877,1.95219372148319,1.50796378412959,0.955875191810208,2.45078541490634,0.849229592366497,2.02405350837447,2.04579100537918,2.37172666767914,0.963963949265421,1.70328102249922,1.78065603667255,1.30309567482861,3.79431282836832,3.98235415019888,2.18502572539483,1.209294227859,1.69744571780308,2.06711325016541,2.45948118355142,2.84271122485043,0.727067458955011,2.13898427030833,2.52829406348653,1.05418608574999,0,3.06395645178409,0.900305470156551,0.388076051348264,0.857348140126369,0.709360934569094,1.07021290561242,1.48094118541909,1.522324745573,0.938686832254841,1.27099242518292,4.6310963591542,3.62749756471256,4.19807509409354,2.11095237248546,2.626191568069,4.43180429311665,7.57850175237612,0.927126510052548,1.87957968877638,1.23832120777933,1.85194527369712,0.565105371014073,0.820165366326151,0.457556346413045,13.2583175395207,11.056164733569,8.56839837587428,2.86401185404534,0.790839983952838,1.01659733563424,1.29606408986162,1.25452977608681,2.40198820120795,3.236744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| |||
|short_description=p1@ENSMUST00000161759 | |||
}} | |||
Revision as of 15:34, 13 September 2013
| Short description: | p1@ENSMUST00000161759 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENSMUST00000161759_5end |
| Coexpression cluster: | MCL_coexpression_mm9:386 |
| Association with transcript: | 0bp_to_ENSMUST00000161759_5end |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.33e-08 | 25 |
| endodermal cell | 5.09e-07 | 20 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 9.64e-12 | 31 |
| mucosa | 2.62e-09 | 15 |
| intestinal mucosa | 2.09e-08 | 13 |
| wall of intestine | 2.09e-08 | 13 |
| gastrointestinal system mucosa | 2.09e-08 | 13 |
| gastrointestinal system | 3.91e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
