FFCP PHASE1:Hg19::chr5:28982718..28982721,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C146|description=CAGE_peak_at_chr5:28982718..28982721,+|id=chr5:28982718..28982721,+|ontology_enrichment_celltype=CL:0000054!2.42e-07!2;CL:0000137!2.42e-07!2;CL:0000092!2.42e-07!2|ontology_enrichment_celltype_v019=CL:0000047;6.93e-09;2!CL:0000054;6.93e-09;2!CL:0000137;6.93e-09;2!CL:0000092;6.93e-09;2|ontology_enrichment_celltype_v019_2=CL:0000054,6.42e-09,2;CL:0000137,6.42e-09,2;CL:0000092,6.42e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:200!2.42e-07!2;DOID:4305!2.42e-07!2;DOID:1036!9.09e-07!8|ontology_enrichment_disease_v019=DOID:1036;1.15e-30;8!DOID:0060085;1.93e-16;1!DOID:3165;1.93e-16;1!DOID:0060121;1.93e-16;1!DOID:2438;1.93e-16;1!DOID:4418;1.93e-16;1!DOID:200;6.93e-09;2!DOID:4305;6.93e-09;2!DOID:8692;1.99e-08;31!DOID:2531;5.72e-07;51!DOID:0060083;5.72e-07;51!DOID:1240;7.02e-07;39|ontology_enrichment_disease_v019_2=DOID:1036,8.48e-31,8;DOID:0060085,1.65e-16,1;DOID:3165,1.65e-16,1;DOID:0060121,1.65e-16,1;DOID:2438,1.65e-16,1;DOID:4418,1.65e-16,1;DOID:200,6.42e-09,2;DOID:4305,6.42e-09,2;DOID:8692,3.39e-08,31;DOID:2531,1.68e-07,51;DOID:0060083,1.68e-07,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002134;8.19e-17;1!UBERON:0001282;8.19e-17;1!UBERON:0009842;8.19e-17;1!UBERON:0003704;8.19e-17;1!UBERON:0005208;8.19e-17;1!UBERON:0004145;8.19e-17;1!UBERON:0005946;8.19e-17;1!UBERON:0001171;8.19e-17;1!UBERON:0001172;8.19e-17;1!UBERON:0005965;8.19e-17;1!UBERON:0002078;8.19e-17;1!UBERON:0002081;4.52e-09;2!UBERON:0002133;4.52e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0002134,8.86e-17,1;UBERON:0005208,8.86e-17,1;UBERON:0005946,8.86e-17,1;UBERON:0005965,8.86e-17,1;UBERON:0002078,8.86e-17,1;UBERON:0001282,1.04e-16,1;UBERON:0009842,1.04e-16,1;UBERON:0003704,1.04e-16,1;UBERON:0001171,1.04e-16,1;UBERON:0001172,1.04e-16,1;UBERON:0002081,4.70e-09,2;UBERON:0002133,4.70e-09,2;UBERON:0010227,4.70e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0.23056390438806,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,3.38393490925771,1.17637520590644,1.84603745673427,1.89753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,2.15361907373044,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,1.13312091520126,0,0,0,0,0,0,0,0,0,0,9.88058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82315897372553,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0,0,0.0645889098360061,0.124149428591716,2.69116470193472,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:28982718..28982721,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_at_chr5:28982718..28982721,+ | |||
|id=chr5:28982718..28982721,+ | |||
|ontology_enrichment_celltype=CL:0000054!2.42e-07!2;CL:0000137!2.42e-07!2;CL:0000092!2.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.93e-09;2!CL:0000054;6.93e-09;2!CL:0000137;6.93e-09;2!CL:0000092;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,6.42e-09,2;CL:0000137,6.42e-09,2;CL:0000092,6.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:200!2.42e-07!2;DOID:4305!2.42e-07!2;DOID:1036!9.09e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.15e-30;8!DOID:0060085;1.93e-16;1!DOID:3165;1.93e-16;1!DOID:0060121;1.93e-16;1!DOID:2438;1.93e-16;1!DOID:4418;1.93e-16;1!DOID:200;6.93e-09;2!DOID:4305;6.93e-09;2!DOID:8692;1.99e-08;31!DOID:2531;5.72e-07;51!DOID:0060083;5.72e-07;51!DOID:1240;7.02e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,8.48e-31,8;DOID:0060085,1.65e-16,1;DOID:3165,1.65e-16,1;DOID:0060121,1.65e-16,1;DOID:2438,1.65e-16,1;DOID:4418,1.65e-16,1;DOID:200,6.42e-09,2;DOID:4305,6.42e-09,2;DOID:8692,3.39e-08,31;DOID:2531,1.68e-07,51;DOID:0060083,1.68e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;8.19e-17;1!UBERON:0001282;8.19e-17;1!UBERON:0009842;8.19e-17;1!UBERON:0003704;8.19e-17;1!UBERON:0005208;8.19e-17;1!UBERON:0004145;8.19e-17;1!UBERON:0005946;8.19e-17;1!UBERON:0001171;8.19e-17;1!UBERON:0001172;8.19e-17;1!UBERON:0005965;8.19e-17;1!UBERON:0002078;8.19e-17;1!UBERON:0002081;4.52e-09;2!UBERON:0002133;4.52e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,8.86e-17,1;UBERON:0005208,8.86e-17,1;UBERON:0005946,8.86e-17,1;UBERON:0005965,8.86e-17,1;UBERON:0002078,8.86e-17,1;UBERON:0001282,1.04e-16,1;UBERON:0009842,1.04e-16,1;UBERON:0003704,1.04e-16,1;UBERON:0001171,1.04e-16,1;UBERON:0001172,1.04e-16,1;UBERON:0002081,4.70e-09,2;UBERON:0002133,4.70e-09,2;UBERON:0010227,4.70e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0.23056390438806,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,3.38393490925771,1.17637520590644,1.84603745673427,1.89753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,2.15361907373044,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,1.13312091520126,0,0,0,0,0,0,0,0,0,0,9.88058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82315897372553,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0,0,0.0645889098360061,0.124149428591716,2.69116470193472,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:28982718..28982721,+ | |||
}} |
Revision as of 15:23, 13 September 2013
Short description: | p@chr5:28982718..28982721, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:28982718..28982721, + |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 6.42e-09 | 2 |
osteocyte | 6.42e-09 | 2 |
osteoclast | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 8.86e-17 | 1 |
right atrium valve | 8.86e-17 | 1 |
outflow tract of atrium | 8.86e-17 | 1 |
outflow part of right atrium | 8.86e-17 | 1 |
right cardiac atrium | 8.86e-17 | 1 |
intralobular bile duct | 1.04e-16 | 1 |
acinus | 1.04e-16 | 1 |
intrahepatic bile duct | 1.04e-16 | 1 |
portal lobule | 1.04e-16 | 1 |
hepatic acinus | 1.04e-16 | 1 |
cardiac atrium | 4.70e-09 | 2 |
atrioventricular valve | 4.70e-09 | 2 |
future cardiac atrium | 4.70e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.48e-31 | 8 |
organ system benign neoplasm | 1.65e-16 | 1 |
skin benign neoplasm | 1.65e-16 | 1 |
integumentary system benign neoplasm | 1.65e-16 | 1 |
dermis tumor | 1.65e-16 | 1 |
cutaneous fibrous histiocytoma | 1.65e-16 | 1 |
giant cell tumor | 6.42e-09 | 2 |
bone giant cell tumor | 6.42e-09 | 2 |
myeloid leukemia | 3.39e-08 | 31 |
hematologic cancer | 1.68e-07 | 51 |
immune system cancer | 1.68e-07 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.