FFCP PHASE1:Hg19::chr5:27723923..27723927,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:27723923..27723927,-|id=chr5:27723923..27723927,-|ontology_enrichment_celltype=CL:0000054!5.48e-18!2;CL:0000137!5.48e-18!2;CL:0000092!5.48e-18!2|ontology_enrichment_celltype_v019=CL:0000054;4.90e-26;2!CL:0000137;4.90e-26;2!CL:0000092;4.90e-26;2|ontology_enrichment_celltype_v019_2=CL:0000054,4.32e-26,2;CL:0000137,4.32e-26,2;CL:0000092,4.32e-26,2|ontology_enrichment_development_v019=UBERON:0007123;3.60e-11;5|ontology_enrichment_disease=DOID:0060085!1.84e-34!1;DOID:3165!1.84e-34!1;DOID:0060121!1.84e-34!1;DOID:2438!1.84e-34!1;DOID:4418!1.84e-34!1;DOID:200!5.48e-18!2;DOID:4305!5.48e-18!2;DOID:0060072!1.12e-09!4;DOID:201!7.17e-07!6;DOID:0060100!7.17e-07!6|ontology_enrichment_disease_v019=DOID:0060085;1.88e-50;1!DOID:3165;1.88e-50;1!DOID:0060121;1.88e-50;1!DOID:2438;1.88e-50;1!DOID:4418;1.88e-50;1!DOID:200;4.90e-26;2!DOID:4305;4.90e-26;2!DOID:0060072;9.39e-14;4!DOID:201;1.27e-09;6!DOID:0060100;1.27e-09;6!DOID:1036;1.69e-07;8|ontology_enrichment_disease_v019_2=DOID:0060085,1.46e-50,1;DOID:3165,1.46e-50,1;DOID:0060121,1.46e-50,1;DOID:2438,1.46e-50,1;DOID:4418,1.46e-50,1;DOID:200,4.32e-26,2;DOID:4305,4.32e-26,2;DOID:0060072,8.82e-14,4;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6;DOID:1036,1.69e-07,8|ontology_enrichment_uberon=UBERON:0000014!1.12e-09!4;UBERON:0002046!6.55e-08!5;UBERON:0004117!6.55e-08!5;UBERON:0007689!6.55e-08!5;UBERON:0007123!6.55e-08!5;UBERON:0003091!6.55e-08!5|ontology_enrichment_uberon_v019=UBERON:0000014;9.39e-14;4!UBERON:0002046;3.60e-11;5|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.82e-14,4;UBERON:0002046,3.60e-11,5;UBERON:0004117,3.60e-11,5;UBERON:0007689,3.60e-11,5;UBERON:0007123,3.60e-11,5;UBERON:0003091,3.60e-11,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75629679790165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35090359971497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74200267135126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81248332774086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:27723923..27723927,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:27723923..27723927,- | |||
|id=chr5:27723923..27723927,- | |||
|ontology_enrichment_celltype=CL:0000054!5.48e-18!2;CL:0000137!5.48e-18!2;CL:0000092!5.48e-18!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;4.90e-26;2!CL:0000137;4.90e-26;2!CL:0000092;4.90e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,4.32e-26,2;CL:0000137,4.32e-26,2;CL:0000092,4.32e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.60e-11;5 | |||
|ontology_enrichment_disease=DOID:0060085!1.84e-34!1;DOID:3165!1.84e-34!1;DOID:0060121!1.84e-34!1;DOID:2438!1.84e-34!1;DOID:4418!1.84e-34!1;DOID:200!5.48e-18!2;DOID:4305!5.48e-18!2;DOID:0060072!1.12e-09!4;DOID:201!7.17e-07!6;DOID:0060100!7.17e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.88e-50;1!DOID:3165;1.88e-50;1!DOID:0060121;1.88e-50;1!DOID:2438;1.88e-50;1!DOID:4418;1.88e-50;1!DOID:200;4.90e-26;2!DOID:4305;4.90e-26;2!DOID:0060072;9.39e-14;4!DOID:201;1.27e-09;6!DOID:0060100;1.27e-09;6!DOID:1036;1.69e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.46e-50,1;DOID:3165,1.46e-50,1;DOID:0060121,1.46e-50,1;DOID:2438,1.46e-50,1;DOID:4418,1.46e-50,1;DOID:200,4.32e-26,2;DOID:4305,4.32e-26,2;DOID:0060072,8.82e-14,4;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6;DOID:1036,1.69e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0000014!1.12e-09!4;UBERON:0002046!6.55e-08!5;UBERON:0004117!6.55e-08!5;UBERON:0007689!6.55e-08!5;UBERON:0007123!6.55e-08!5;UBERON:0003091!6.55e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;9.39e-14;4!UBERON:0002046;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.82e-14,4;UBERON:0002046,3.60e-11,5;UBERON:0004117,3.60e-11,5;UBERON:0007689,3.60e-11,5;UBERON:0007123,3.60e-11,5;UBERON:0003091,3.60e-11,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.75629679790165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35090359971497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74200267135126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81248332774086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:27723923..27723927,- | |||
}} |
Revision as of 15:22, 13 September 2013
Short description: | p@chr5:27723923..27723927, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:27723923..27723927, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 4.32e-26 | 2 |
osteocyte | 4.32e-26 | 2 |
osteoclast | 4.32e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 8.82e-14 | 4 |
thyroid gland | 3.60e-11 | 5 |
pharyngeal pouch | 3.60e-11 | 5 |
thyroid diverticulum | 3.60e-11 | 5 |
pharyngeal pouch 2 | 3.60e-11 | 5 |
thyroid primordium | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.46e-50 | 1 |
skin benign neoplasm | 1.46e-50 | 1 |
integumentary system benign neoplasm | 1.46e-50 | 1 |
dermis tumor | 1.46e-50 | 1 |
cutaneous fibrous histiocytoma | 1.46e-50 | 1 |
giant cell tumor | 4.32e-26 | 2 |
bone giant cell tumor | 4.32e-26 | 2 |
benign neoplasm | 8.82e-14 | 4 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |
chronic leukemia | 1.69e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.