FFCP PHASE1:Hg19::chr5:1883090..1883121,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50805|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6129|TSSclassifier=S|UniProt=P78413|association_with_transcript=-210bp_to_ENST00000231357,NM_016358,uc003jcz.2,uc011cmf.1_5end|description=CAGE_peak_6_at_IRX4_5end|id=chr5:1883090..1883121,-|ontology_enrichment_celltype=CL:0000039!2.08e-14!7;CL:0000586!2.08e-14!7;CL:0002327!2.22e-07!4;CL:0000066!6.92e-07!254|ontology_enrichment_celltype_v019=CL:0002535;6.93e-09;2|ontology_enrichment_celltype_v019_2=CL:0002535,7.49e-09,2|ontology_enrichment_development_v019=UBERON:0000358;8.19e-17;1!UBERON:0008425;1.93e-16;1!UBERON:0008814;6.93e-09;2!UBERON:0010056;6.93e-09;2|ontology_enrichment_disease=DOID:1749!4.75e-12!14;DOID:5093!1.51e-07!4;DOID:1612!1.51e-07!4;DOID:0050687!1.75e-07!143;DOID:114!4.02e-07!2;DOID:1287!5.13e-07!4|ontology_enrichment_disease_v019=DOID:1749;1.47e-17;14!DOID:1799;8.19e-17;1!DOID:10165;8.19e-17;1!DOID:1798;8.19e-17;1!DOID:5093;4.51e-16;4!DOID:1612;4.51e-16;4|ontology_enrichment_disease_v019_2=DOID:1749,1.53e-17,14;DOID:1799,8.86e-17,1;DOID:10165,8.86e-17,1;DOID:1798,8.86e-17,1;DOID:5093,4.51e-16,4;DOID:1612,4.51e-16,4|ontology_enrichment_uberon=UBERON:0001911!2.22e-07!4;UBERON:0005333!2.22e-07!4;UBERON:0008425!2.22e-07!4;UBERON:0005311!2.22e-07!4|ontology_enrichment_uberon_v019=UBERON:0002331;6.20e-25;10!UBERON:0000478;1.36e-10;24!UBERON:0000178;7.22e-10;15!UBERON:0000179;7.22e-10;15!UBERON:0000463;7.22e-10;15!UBERON:0006955;6.93e-09;2!UBERON:0004801;6.93e-09;2!UBERON:0000310;5.59e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.65e-25,10;UBERON:0000358,5.65e-25,10;UBERON:0000307,5.65e-25,10;UBERON:0000091,5.65e-25,10;UBERON:0000087,5.65e-25,10;UBERON:0007010,5.65e-25,10;UBERON:0007806,5.65e-25,10;UBERON:0008780,5.65e-25,10;UBERON:0005728,5.65e-25,10;UBERON:0000478,1.31e-10,24;UBERON:0000178,6.59e-10,15;UBERON:0000179,6.59e-10,15;UBERON:0000463,6.59e-10,15;UBERON:0006955,7.49e-09,2;UBERON:0004801,7.49e-09,2;UBERON:0000310,5.59e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0.15403067420883,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,1.04171104434093,1.74919999992391,0,1.70690172428249,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,0.987334088507493,4.23724750495832,0,0,0,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0,0,0,0,0,0,0,4.44781693020933,2.84197059576957,1.56632924258183,0,0,0,0,0,0,0,0,0,0.063186579628488,2.55549813004637,0.207376382794494,0,0,0,0,0,0,0,0,1.48000651186684,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0.858452096273142,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0.2249738915515,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,1.5018336599544,0,0,0.198916222116275,0,0,0,2.3571602503328,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,1.07132363163395,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.18378979906969,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p6@IRX4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=50805 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6129 | |||
|TSSclassifier=S | |||
|UniProt=P78413 | |||
|association_with_transcript=-210bp_to_ENST00000231357,NM_016358,uc003jcz.2,uc011cmf.1_5end | |||
|description=CAGE_peak_6_at_IRX4_5end | |||
|id=chr5:1883090..1883121,- | |||
|ontology_enrichment_celltype=CL:0000039!2.08e-14!7;CL:0000586!2.08e-14!7;CL:0002327!2.22e-07!4;CL:0000066!6.92e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002535;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.19e-17;1!UBERON:0008425;1.93e-16;1!UBERON:0008814;6.93e-09;2!UBERON:0010056;6.93e-09;2 | |||
|ontology_enrichment_disease=DOID:1749!4.75e-12!14;DOID:5093!1.51e-07!4;DOID:1612!1.51e-07!4;DOID:0050687!1.75e-07!143;DOID:114!4.02e-07!2;DOID:1287!5.13e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.47e-17;14!DOID:1799;8.19e-17;1!DOID:10165;8.19e-17;1!DOID:1798;8.19e-17;1!DOID:5093;4.51e-16;4!DOID:1612;4.51e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.53e-17,14;DOID:1799,8.86e-17,1;DOID:10165,8.86e-17,1;DOID:1798,8.86e-17,1;DOID:5093,4.51e-16,4;DOID:1612,4.51e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0001911!2.22e-07!4;UBERON:0005333!2.22e-07!4;UBERON:0008425!2.22e-07!4;UBERON:0005311!2.22e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.20e-25;10!UBERON:0000478;1.36e-10;24!UBERON:0000178;7.22e-10;15!UBERON:0000179;7.22e-10;15!UBERON:0000463;7.22e-10;15!UBERON:0006955;6.93e-09;2!UBERON:0004801;6.93e-09;2!UBERON:0000310;5.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.65e-25,10;UBERON:0000358,5.65e-25,10;UBERON:0000307,5.65e-25,10;UBERON:0000091,5.65e-25,10;UBERON:0000087,5.65e-25,10;UBERON:0007010,5.65e-25,10;UBERON:0007806,5.65e-25,10;UBERON:0008780,5.65e-25,10;UBERON:0005728,5.65e-25,10;UBERON:0000478,1.31e-10,24;UBERON:0000178,6.59e-10,15;UBERON:0000179,6.59e-10,15;UBERON:0000463,6.59e-10,15;UBERON:0006955,7.49e-09,2;UBERON:0004801,7.49e-09,2;UBERON:0000310,5.59e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0.15403067420883,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,1.04171104434093,1.74919999992391,0,1.70690172428249,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,0.987334088507493,4.23724750495832,0,0,0,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0,0,0,0,0,0,0,4.44781693020933,2.84197059576957,1.56632924258183,0,0,0,0,0,0,0,0,0,0.063186579628488,2.55549813004637,0.207376382794494,0,0,0,0,0,0,0,0,1.48000651186684,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0.858452096273142,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0.2249738915515,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,1.5018336599544,0,0,0.198916222116275,0,0,0,2.3571602503328,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,1.07132363163395,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.18378979906969,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p6@IRX4 | |||
}} |
Revision as of 15:18, 13 September 2013
Short description: | p6@IRX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_IRX4_5end |
Coexpression cluster: | NA |
Association with transcript: | -210bp_to_ENST00000231357, NM_016358, uc003jcz.2, uc011cmf.1_5end |
EntrezGene: | IRX4 |
HGNC: | 6129 |
UniProt: | P78413 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.65e-25 | 10 |
blastocyst | 5.65e-25 | 10 |
blastula | 5.65e-25 | 10 |
bilaminar disc | 5.65e-25 | 10 |
inner cell mass | 5.65e-25 | 10 |
cleaving embryo | 5.65e-25 | 10 |
connecting stalk | 5.65e-25 | 10 |
inner cell mass derived epiblast | 5.65e-25 | 10 |
extraembryonic mesoderm | 5.65e-25 | 10 |
extraembryonic structure | 1.31e-10 | 24 |
blood | 6.59e-10 | 15 |
haemolymphatic fluid | 6.59e-10 | 15 |
organism substance | 6.59e-10 | 15 |
uterine epithelium | 7.49e-09 | 2 |
cervix epithelium | 7.49e-09 | 2 |
breast | 5.59e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.53e-17 | 14 |
islet cell tumor | 8.86e-17 | 1 |
endocrine pancreas cancer | 8.86e-17 | 1 |
pancreatic endocrine carcinoma | 8.86e-17 | 1 |
thoracic cancer | 4.51e-16 | 4 |
breast cancer | 4.51e-16 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.