FFCP PHASE1:Mm9::chr17:71347321..71347340,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67268|HGNC=|MCL_coexpression_id=2667|UniProt=Q6ZWQ9|association_with_transcript=11bp_to_ENSMUST00000024846_5end|description=CAGE_peak_4_at_Myl12a_5end|id=chr17:71347321..71347340,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.56e-09,7;CL:0000680,6.73e-09,6;CL:0000187,6.73e-09,6;CL:0000056,6.73e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!2.61e-11!23;UBERON:0001009!2.61e-11!23;UBERON:0004872!1.89e-08!33;UBERON:0007100!2.60e-08!18;UBERON:0000948!2.60e-08!18;UBERON:0005498!2.60e-08!18;UBERON:0004140!2.60e-08!18;UBERON:0009881!2.60e-08!18;UBERON:0004141!2.60e-08!18;UBERON:0003084!2.60e-08!18;UBERON:0007005!2.60e-08!18;UBERON:0004139!2.60e-08!18;UBERON:0004291!2.60e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.55e-12,23;UBERON:0001009,3.55e-12,23;UBERON:0004872,2.87e-09,33;UBERON:0007100,1.42e-07,18;UBERON:0000948,1.42e-07,18;UBERON:0005498,1.42e-07,18;UBERON:0004140,1.42e-07,18;UBERON:0009881,1.42e-07,18;UBERON:0004141,1.42e-07,18;UBERON:0003084,1.42e-07,18;UBERON:0007005,1.42e-07,18;UBERON:0004139,1.42e-07,18;UBERON:0004291,1.42e-07,18;UBERON:0005418,1.48e-07,5;UBERON:0002472,1.48e-07,5;UBERON:0008784,1.48e-07,5;UBERON:0006058,1.48e-07,5;UBERON:0004709,1.48e-07,5;UBERON:0002529,1.48e-07,5;UBERON:0010538,1.48e-07,5;UBERON:0005420,1.48e-07,5;UBERON:0010758,1.48e-07,5;UBERON:0000978,1.48e-07,5;UBERON:0002103,1.48e-07,5;UBERON:0000376,1.48e-07,5;UBERON:0000154,1.48e-07,5;UBERON:0010709,1.48e-07,5;UBERON:0005730,1.48e-07,5;UBERON:0000055,8.88e-07,5;UBERON:0007500,8.88e-07,5;UBERON:0001981,8.88e-07,5;UBERON:0002049,8.88e-07,5;UBERON:0007798,8.88e-07,5;UBERON:0004537,8.88e-07,5;UBERON:0006965,8.88e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4781340671914,20.0726323814639,13.2153661556411,0.782391344348039,2.39827672018491,3.95435128922049,6.22175677037707,0.979904951377538,2.87505128729943,0,0,0,18.5226793945882,20.057340795713,44.34779993586,0,0,0,3.04960078862219,6.22506357277798,0.449949858640699,0.988866362566974,0.7104801149461,6.89080254192331,3.07374644257244,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,19.5217743983135,0.170430322578058,0.519572009205738,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.02765491747154,0,2.3750742250372,0,0.608930956624282,0.230615497256059,0.753613202763113,1.52865319276416,0.753999547978053,6.42706916109372,4.916378135277,10.6153266233985,8.8971767471075,18.7715290691335,15.0311328471919,0,0,0.83778682725382,0.255457055208591,0,0,0,0,0,0,0,0.767146371990992,0.41557608911912,1.94689515681309,0.407357455401265,5.72272064806428,0,4.62972082950243,0,1.14951052216736,1.80062129805349,1.9591626318643,0.95251098811859,1.92170580427275,0.749613796477831,6.72628763921441,0,0,0.703804496655795,1.31517439456545,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.900310307305074,0.710234206755631,0.393528463494808,0.617068451549513,1.16266972375204,0.268273401399619,5.83826711835847,2.46839774870221,24.9534545400225,45.8038773934085,62.8659945928929,55.3266290533448,60.5270948609277,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.398282546508734,0.379335801906163,0.114248512609729,0,0,0,0.140271639780637,0.442655759869801,0.885660887877613,1.09899109488962,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,3.43241440426017,0.252578877947112,2.69096120282868,0,12.9327233116623,0,0.162964976442026,0,0,0,0,0.585400943573396,0.472905432318573,0.44292937929755,0.797273843287435,6.882259218061,6.04397436530635,20.5401663185746,0,0,0,0.275936746304732,0,0.468846746368813,0.163934945376675,49.2318308048527,0.631016438832513,0.780877488593277,0,0.955875191810208,0.222798674082394,0,0,0,1.18586333383957,0.321321316421807,1.13552068166615,0,0.162886959353576,0,0,0,0,0,0,0,0,0,1.42598951353889,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.469343416127421,3.1774810629573,0.441056796109924,2.80306630000516,1.45317984026315,1.08563264870681,1.19372344003136,1.14898629821543,0.291480836629851,1.29797711407357,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,2.88030006257865,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0,0.201652370273681,0,0,0,27.4343764174406,0.221985953374065,0,0,0.579568782096571,0.750729901804728,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0.399024873401031,1.36586884603307,0.972426868273176,2.09613162627982,0.367687016900028,1.33348036680969,0.618105171716683,0.64183841918363,1.01078884705519,1.52087579934144,0.754505365544305,0.5618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| ||
|EntrezGene=67268 | |||
|HGNC= | |||
|MCL_coexpression_id=2667 | |||
|UniProt=Q6ZWQ9 | |||
|association_with_transcript=11bp_to_ENSMUST00000024846_5end | |||
|description=CAGE_peak_4_at_Myl12a_5end | |||
|id=chr17:71347321..71347340,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.56e-09,7;CL:0000680,6.73e-09,6;CL:0000187,6.73e-09,6;CL:0000056,6.73e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.61e-11!23;UBERON:0001009!2.61e-11!23;UBERON:0004872!1.89e-08!33;UBERON:0007100!2.60e-08!18;UBERON:0000948!2.60e-08!18;UBERON:0005498!2.60e-08!18;UBERON:0004140!2.60e-08!18;UBERON:0009881!2.60e-08!18;UBERON:0004141!2.60e-08!18;UBERON:0003084!2.60e-08!18;UBERON:0007005!2.60e-08!18;UBERON:0004139!2.60e-08!18;UBERON:0004291!2.60e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.55e-12,23;UBERON:0001009,3.55e-12,23;UBERON:0004872,2.87e-09,33;UBERON:0007100,1.42e-07,18;UBERON:0000948,1.42e-07,18;UBERON:0005498,1.42e-07,18;UBERON:0004140,1.42e-07,18;UBERON:0009881,1.42e-07,18;UBERON:0004141,1.42e-07,18;UBERON:0003084,1.42e-07,18;UBERON:0007005,1.42e-07,18;UBERON:0004139,1.42e-07,18;UBERON:0004291,1.42e-07,18;UBERON:0005418,1.48e-07,5;UBERON:0002472,1.48e-07,5;UBERON:0008784,1.48e-07,5;UBERON:0006058,1.48e-07,5;UBERON:0004709,1.48e-07,5;UBERON:0002529,1.48e-07,5;UBERON:0010538,1.48e-07,5;UBERON:0005420,1.48e-07,5;UBERON:0010758,1.48e-07,5;UBERON:0000978,1.48e-07,5;UBERON:0002103,1.48e-07,5;UBERON:0000376,1.48e-07,5;UBERON:0000154,1.48e-07,5;UBERON:0010709,1.48e-07,5;UBERON:0005730,1.48e-07,5;UBERON:0000055,8.88e-07,5;UBERON:0007500,8.88e-07,5;UBERON:0001981,8.88e-07,5;UBERON:0002049,8.88e-07,5;UBERON:0007798,8.88e-07,5;UBERON:0004537,8.88e-07,5;UBERON:0006965,8.88e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4781340671914,20.0726323814639,13.2153661556411,0.782391344348039,2.39827672018491,3.95435128922049,6.22175677037707,0.979904951377538,2.87505128729943,0,0,0,18.5226793945882,20.057340795713,44.34779993586,0,0,0,3.04960078862219,6.22506357277798,0.449949858640699,0.988866362566974,0.7104801149461,6.89080254192331,3.07374644257244,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,19.5217743983135,0.170430322578058,0.519572009205738,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,1.02765491747154,0,2.3750742250372,0,0.608930956624282,0.230615497256059,0.753613202763113,1.52865319276416,0.753999547978053,6.42706916109372,4.916378135277,10.6153266233985,8.8971767471075,18.7715290691335,15.0311328471919,0,0,0.83778682725382,0.255457055208591,0,0,0,0,0,0,0,0.767146371990992,0.41557608911912,1.94689515681309,0.407357455401265,5.72272064806428,0,4.62972082950243,0,1.14951052216736,1.80062129805349,1.9591626318643,0.95251098811859,1.92170580427275,0.749613796477831,6.72628763921441,0,0,0.703804496655795,1.31517439456545,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.900310307305074,0.710234206755631,0.393528463494808,0.617068451549513,1.16266972375204,0.268273401399619,5.83826711835847,2.46839774870221,24.9534545400225,45.8038773934085,62.8659945928929,55.3266290533448,60.5270948609277,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.398282546508734,0.379335801906163,0.114248512609729,0,0,0,0.140271639780637,0.442655759869801,0.885660887877613,1.09899109488962,1.35736880313981,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,3.43241440426017,0.252578877947112,2.69096120282868,0,12.9327233116623,0,0.162964976442026,0,0,0,0,0.585400943573396,0.472905432318573,0.44292937929755,0.797273843287435,6.882259218061,6.04397436530635,20.5401663185746,0,0,0,0.275936746304732,0,0.468846746368813,0.163934945376675,49.2318308048527,0.631016438832513,0.780877488593277,0,0.955875191810208,0.222798674082394,0,0,0,1.18586333383957,0.321321316421807,1.13552068166615,0,0.162886959353576,0,0,0,0,0,0,0,0,0,1.42598951353889,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.469343416127421,3.1774810629573,0.441056796109924,2.80306630000516,1.45317984026315,1.08563264870681,1.19372344003136,1.14898629821543,0.291480836629851,1.29797711407357,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,2.88030006257865,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0,0.201652370273681,0,0,0,27.4343764174406,0.221985953374065,0,0,0.579568782096571,0.750729901804728,0.183151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0,0.399024873401031,1.36586884603307,0.972426868273176,2.09613162627982,0.367687016900028,1.33348036680969,0.618105171716683,0.64183841918363,1.01078884705519,1.52087579934144,0.754505365544305,0.561849044819294,0.768301828858431,0.631790158511746,1.42888107384922,0.347652977834566,0.77163688185482,0,1.47198920134397,1.02860775715625,0.532427418478012,0.476872379894642,0.872078499793971,0.376437521661322,0.846146078916765,0.914639864363863,0.526139422875686,0.814824683075171,0.561142271657738,0.474540072496697,0.689531376628944,0.818462086339379,0.464810523557898,0.578719832943424,0.749431733813838,1.63752125911786,3.86767897286937,4.78220830172108,20.7355933972345,35.9395145211653 | |||
|short_description=p4@Myl12a | |||
}} |
Revision as of 15:14, 13 September 2013
Short description: | p4@Myl12a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Myl12a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2667 |
Association with transcript: | 11bp_to_ENSMUST00000024846_5end |
EntrezGene: | Myl12a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.56e-09 | 7 |
muscle precursor cell | 6.73e-09 | 6 |
muscle cell | 6.73e-09 | 6 |
myoblast | 6.73e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.55e-12 | 23 |
circulatory system | 3.55e-12 | 23 |
splanchnic layer of lateral plate mesoderm | 2.87e-09 | 33 |
primary circulatory organ | 1.42e-07 | 18 |
heart | 1.42e-07 | 18 |
primitive heart tube | 1.42e-07 | 18 |
primary heart field | 1.42e-07 | 18 |
anterior lateral plate mesoderm | 1.42e-07 | 18 |
heart tube | 1.42e-07 | 18 |
heart primordium | 1.42e-07 | 18 |
cardiac mesoderm | 1.42e-07 | 18 |
cardiogenic plate | 1.42e-07 | 18 |
heart rudiment | 1.42e-07 | 18 |
hindlimb bud | 1.48e-07 | 5 |
stylopod | 1.48e-07 | 5 |
lower limb segment | 1.48e-07 | 5 |
multi-limb segment region | 1.48e-07 | 5 |
pelvic appendage | 1.48e-07 | 5 |
limb segment | 1.48e-07 | 5 |
paired limb/fin segment | 1.48e-07 | 5 |
pelvic appendage bud | 1.48e-07 | 5 |
subdivision of organism along appendicular axis | 1.48e-07 | 5 |
leg | 1.48e-07 | 5 |
hindlimb | 1.48e-07 | 5 |
hindlimb stylopod | 1.48e-07 | 5 |
posterior region of body | 1.48e-07 | 5 |
pelvic complex | 1.48e-07 | 5 |
hindlimb/pelvic fin field | 1.48e-07 | 5 |
vessel | 8.88e-07 | 5 |
epithelial tube open at both ends | 8.88e-07 | 5 |
blood vessel | 8.88e-07 | 5 |
vasculature | 8.88e-07 | 5 |
vascular system | 8.88e-07 | 5 |
blood vasculature | 8.88e-07 | 5 |
vascular cord | 8.88e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.