FFCP PHASE1:Mm9::chr17:6988793..6988807,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=143|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:6988793..6988807,-|id=chr17:6988793..6988807,-|ontology_enrichment_celltype=CL:0000349!3.67e-34!3;CL:0000351!3.67e-34!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.58e-86,3;CL:0000351,1.58e-86,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!3.67e-34!3;UBERON:0000307!3.67e-34!3;UBERON:0005631!3.61e-33!3;UBERON:0000478!3.61e-33!3;UBERON:0000158!3.61e-33!3;UBERON:0001987!1.09e-22!2;UBERON:0003124!1.09e-22!2;UBERON:0004340!1.09e-22!2;UBERON:0000305!3.34e-12!1;UBERON:0005795!7.16e-12!4;UBERON:0000995!7.16e-12!4;UBERON:0003975!1.09e-09!5;UBERON:0004923!1.20e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.58e-86,3;UBERON:0000307,1.58e-86,3;UBERON:0007010,1.58e-86,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21985953374065,9.86852422704233,1.00730769818447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:6988793..6988807,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=143 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:6988793..6988807,- | |||
|id=chr17:6988793..6988807,- | |||
|ontology_enrichment_celltype=CL:0000349!3.67e-34!3;CL:0000351!3.67e-34!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.58e-86,3;CL:0000351,1.58e-86,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!3.67e-34!3;UBERON:0000307!3.67e-34!3;UBERON:0005631!3.61e-33!3;UBERON:0000478!3.61e-33!3;UBERON:0000158!3.61e-33!3;UBERON:0001987!1.09e-22!2;UBERON:0003124!1.09e-22!2;UBERON:0004340!1.09e-22!2;UBERON:0000305!3.34e-12!1;UBERON:0005795!7.16e-12!4;UBERON:0000995!7.16e-12!4;UBERON:0003975!1.09e-09!5;UBERON:0004923!1.20e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.58e-86,3;UBERON:0000307,1.58e-86,3;UBERON:0007010,1.58e-86,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21985953374065,9.86852422704233,1.00730769818447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:6988793..6988807,- | |||
}} |
Revision as of 15:11, 13 September 2013
Short description: | p@chr17:6988793..6988807, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:6988793..6988807, - |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.58e-86 | 3 |
trophoblast cell | 1.58e-86 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.58e-86 | 3 |
blastula | 1.58e-86 | 3 |
cleaving embryo | 1.58e-86 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.