FFCP PHASE1:Mm9::chr17:66707060..66707063,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1403|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:66707060..66707063,-|id=chr17:66707060..66707063,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.19e-07!14;UBERON:0000117!1.19e-07!14;UBERON:0000171!1.19e-07!14;UBERON:0000170!1.19e-07!14;UBERON:0005597!1.19e-07!14;UBERON:0000118!1.19e-07!14;UBERON:0000464!3.80e-07!57;UBERON:0000033!4.96e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.99e-09,9;UBERON:0000019,4.99e-09,9;UBERON:0000047,4.99e-09,9;UBERON:0010312,4.99e-09,9;UBERON:0004088,4.99e-09,9;UBERON:0002104,4.99e-09,9;UBERON:0001456,4.99e-09,9;UBERON:0003072,4.99e-09,9;UBERON:0004128,4.99e-09,9;UBERON:0003071,4.99e-09,9;UBERON:0002048,1.01e-08,14;UBERON:0000117,1.01e-08,14;UBERON:0000171,1.01e-08,14;UBERON:0000170,1.01e-08,14;UBERON:0005597,1.01e-08,14;UBERON:0000118,1.01e-08,14;UBERON:0001444,2.06e-07,11;UBERON:0005153,3.75e-07,17;UBERON:0005178,3.75e-07,17;UBERON:0005181,3.75e-07,17;UBERON:0002224,3.75e-07,17;UBERON:0000915,3.75e-07,17;UBERON:0008947,3.75e-07,17;UBERON:0003258,3.75e-07,17;UBERON:0000020,8.35e-07,12;UBERON:0001032,8.35e-07,12;UBERON:0004456,8.35e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,0,0,0,0.263772575460388,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,3.80615036115011,7.12118803165747,0,0,0,0,0.599162557619291,0.915001205637253,0.376963056338593,1.73824320192276,0.511430914660661,0,0.324482526135515,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.30140963567143,1.29269348387523,1.40925092313335,1.49922759295566,3.3631438196072,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.308713837137853,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0.456994050438915,0,0.407302655690628,0,0.280543279561274,0.569128834118316,0.295220295959204,0.941992367048249,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,1.11618338060241,2.29408640602033,2.07221978239075,2.4590339958857,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0.21183207086382,0,0.49465875882444,0.161464426695906,0.361877549568935,0.358117032009409,0.164140899745061,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.330613822901344,0.523511883968059,0.777689839750757,0.621339313086926,0,0.448549638131936,0.330916980914195,0.583353565032143,0.387479470433193,0.844780627453891,0.821500670520278,1.43224823328345,2.41176492179135,0.966336483304024,0.576060012515731,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0.572895513439397,0.859265911718438,0,0,0.675022500231806,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0.682934423016537,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0,0.377252682772152,0.187283014939765,0.384150914429216,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr17:66707060..66707063,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1403 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:66707060..66707063,- | |||
|id=chr17:66707060..66707063,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.19e-07!14;UBERON:0000117!1.19e-07!14;UBERON:0000171!1.19e-07!14;UBERON:0000170!1.19e-07!14;UBERON:0005597!1.19e-07!14;UBERON:0000118!1.19e-07!14;UBERON:0000464!3.80e-07!57;UBERON:0000033!4.96e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.99e-09,9;UBERON:0000019,4.99e-09,9;UBERON:0000047,4.99e-09,9;UBERON:0010312,4.99e-09,9;UBERON:0004088,4.99e-09,9;UBERON:0002104,4.99e-09,9;UBERON:0001456,4.99e-09,9;UBERON:0003072,4.99e-09,9;UBERON:0004128,4.99e-09,9;UBERON:0003071,4.99e-09,9;UBERON:0002048,1.01e-08,14;UBERON:0000117,1.01e-08,14;UBERON:0000171,1.01e-08,14;UBERON:0000170,1.01e-08,14;UBERON:0005597,1.01e-08,14;UBERON:0000118,1.01e-08,14;UBERON:0001444,2.06e-07,11;UBERON:0005153,3.75e-07,17;UBERON:0005178,3.75e-07,17;UBERON:0005181,3.75e-07,17;UBERON:0002224,3.75e-07,17;UBERON:0000915,3.75e-07,17;UBERON:0008947,3.75e-07,17;UBERON:0003258,3.75e-07,17;UBERON:0000020,8.35e-07,12;UBERON:0001032,8.35e-07,12;UBERON:0004456,8.35e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,0,0,0,0.263772575460388,0.274462930807229,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,3.80615036115011,7.12118803165747,0,0,0,0,0.599162557619291,0.915001205637253,0.376963056338593,1.73824320192276,0.511430914660661,0,0.324482526135515,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.30140963567143,1.29269348387523,1.40925092313335,1.49922759295566,3.3631438196072,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.308713837137853,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0.456994050438915,0,0.407302655690628,0,0.280543279561274,0.569128834118316,0.295220295959204,0.941992367048249,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0.37898282354097,0.162964976442026,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,1.11618338060241,2.29408640602033,2.07221978239075,2.4590339958857,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.727067458955011,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0.21183207086382,0,0.49465875882444,0.161464426695906,0.361877549568935,0.358117032009409,0.164140899745061,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.330613822901344,0.523511883968059,0.777689839750757,0.621339313086926,0,0.448549638131936,0.330916980914195,0.583353565032143,0.387479470433193,0.844780627453891,0.821500670520278,1.43224823328345,2.41176492179135,0.966336483304024,0.576060012515731,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0.572895513439397,0.859265911718438,0,0,0.675022500231806,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0.682934423016537,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.64183841918363,0,0,0.377252682772152,0.187283014939765,0.384150914429216,0.402048282689293,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.476872379894642,0,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.492522411877817,0,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr17:66707060..66707063,- | |||
}} |
Revision as of 15:08, 13 September 2013
Short description: | p@chr17:66707060..66707063, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:66707060..66707063, - |
Coexpression cluster: | MCL_coexpression_mm9:1403 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.99e-09 | 9 |
camera-type eye | 4.99e-09 | 9 |
simple eye | 4.99e-09 | 9 |
immature eye | 4.99e-09 | 9 |
ocular region | 4.99e-09 | 9 |
visual system | 4.99e-09 | 9 |
face | 4.99e-09 | 9 |
optic cup | 4.99e-09 | 9 |
optic vesicle | 4.99e-09 | 9 |
eye primordium | 4.99e-09 | 9 |
lung | 1.01e-08 | 14 |
respiratory tube | 1.01e-08 | 14 |
respiration organ | 1.01e-08 | 14 |
pair of lungs | 1.01e-08 | 14 |
lung primordium | 1.01e-08 | 14 |
lung bud | 1.01e-08 | 14 |
subdivision of head | 2.06e-07 | 11 |
epithelial bud | 3.75e-07 | 17 |
thoracic cavity element | 3.75e-07 | 17 |
thoracic segment organ | 3.75e-07 | 17 |
thoracic cavity | 3.75e-07 | 17 |
thoracic segment of trunk | 3.75e-07 | 17 |
respiratory primordium | 3.75e-07 | 17 |
endoderm of foregut | 3.75e-07 | 17 |
sense organ | 8.35e-07 | 12 |
sensory system | 8.35e-07 | 12 |
entire sense organ system | 8.35e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.