FFCP PHASE1:Hg19::chr5:175964279..175964361,-: Difference between revisions
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{{FFCP | 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2184177277261,6.35781170733295,7.49667189264181,3.12431239445539,8.06078506354618,7.99039208443226,25.1608412148381,2.19303106742873,1.48863353516788,7.73833475182331,2.55524855279191,6.42842203053944,4.37168838884471,2.42786241694653,2.27662191351298,4.16901139764402,7.72067716623721,2.22934412268644,5.5735181041002,6.90614122409915,3.66400906740301,4.3380246737907,4.31712010677827,8.95558862521211,10.650342205924,6.39211104356647,4.75040700680967,14.3325506366115,5.00335809236594,16.749442843669,4.30093273862063,17.5596855025605,4.00855682365126,4.55875561158681,3.92652497316085,3.45629830907046,2.15113679410139,1.53831600949735,2.30076192849726,3.81048345171836,2.7492824225286,1.5510319283216,0.955538938977433,10.0669888618013,3.53340841014875,5.85206039914893,2.58971534875158,2.97722139883116,4.6392577253528,6.31424290976881,2.80727356154527,13.528652710973,3.92436299565976,6.2120345121428,30.7833446887202,5.73658805553359,3.70435958918134,8.52382285965433,2.82190377816914,3.18692818280077,13.1978866376911,3.33724394095407,4.1586496045792,4.226557275834,0.849635573439084,13.7216520250586,13.2138670345833,9.19458634509346,7.32071148283196,4.58763333230399,2.80844783412089,2.19100916473955,1.83491713361816,7.02363957442111,5.36423311456828,8.63491925424617,31.8536003948476,6.34832208618481,0.743990036333503,1.38652688589425,0,8.45315046395029,10.7080260524422,12.4164530991208,29.2707941359488,41.1514804108963,27.0171004632444,27.5778293221613,5.30450887527676,2.94760543171796,2.48750831837634,7.13687671447077,7.24995538463335,3.33290204049236,45.7289481638923,37.4931274346982,3.25182401483779,2.86412212251742,2.22328907854041,3.48346796635138,2.05339980651169,13.4030585499029,3.44266585884847,2.99394320891412,12.0476837544242,8.00455094082866,1.9307228228694,3.95230889268982,0,4.15620910221746,4.06896178315738,2.66302709674205,17.1082724552372,5.44966436915496|short_description=p3@RNF44}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22838 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19180 | |||
|TSSclassifier=S | |||
|UniProt=D6RAW5 | |||
|association_with_transcript=0bp_to_ENST00000504160_5end | |||
|description=CAGE_peak_3_at_RNF44_5end | |||
|id=chr5:175964279..175964361,- | |||
|ontology_enrichment_celltype=CL:0000542!3.72e-17!53;CL:0000051!3.72e-17!53;CL:0000838!3.93e-17!52;CL:0000037!4.65e-13!172;CL:0000566!4.65e-13!172;CL:0000988!4.55e-12!182;CL:0002032!1.50e-11!165;CL:0000837!1.50e-11!165;CL:0000084!5.98e-09!25;CL:0000827!5.98e-09!25;CL:0000738!2.66e-08!140;CL:0000791!3.25e-08!18;CL:0000789!3.25e-08!18;CL:0002420!3.25e-08!18;CL:0002419!3.25e-08!18;CL:0000790!3.25e-08!18;CL:0000945!5.25e-08!24;CL:0000826!5.25e-08!24;CL:0002087!1.62e-07!119;CL:0000236!2.13e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.16e-10;53!CL:0000084;5.86e-09;25!CL:0000791;2.64e-08;18!CL:0000789;2.64e-08;18!CL:0002419;2.64e-08;18!CL:0000945;6.34e-08;24!CL:0000236;2.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.79e-17,53;CL:0000051,2.79e-17,53;CL:0000838,2.95e-17,52;CL:0000037,3.01e-13,168;CL:0000988,1.31e-12,177;CL:0002032,1.02e-11,161;CL:0000837,1.02e-11,161;CL:0000084,5.22e-09,25;CL:0000827,5.22e-09,25;CL:0000738,2.38e-08,136;CL:0000791,2.87e-08,18;CL:0000789,2.87e-08,18;CL:0002420,2.87e-08,18;CL:0002419,2.87e-08,18;CL:0000790,2.87e-08,18;CL:0000945,4.66e-08,24;CL:0000826,4.66e-08,24;CL:0002087,1.12e-07,115;CL:0000236,1.92e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;3.16e-10;53!CL:0000790;2.64e-08;18 | |||
|ontology_enrichment_disease=DOID:162!1.63e-11!235;DOID:14566!3.66e-10!239;DOID:1240!3.04e-09!39;DOID:2531!3.57e-09!51;DOID:0060083!3.57e-09!51;DOID:0050687!1.81e-08!143;DOID:3095!4.95e-08!22;DOID:2994!4.95e-08!22;DOID:305!5.76e-08!106;DOID:0050686!6.20e-08!137;DOID:8692!1.15e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.61e-08;22!DOID:2994;3.61e-08;22!DOID:8692;1.14e-07;31!DOID:1240;1.16e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.30e-11,235;DOID:14566,4.27e-10,239;DOID:1240,2.64e-09,39;DOID:2531,3.10e-09,51;DOID:0060083,3.10e-09,51;DOID:0050687,2.54e-08,143;DOID:3095,4.39e-08,22;DOID:2994,4.39e-08,22;DOID:0050686,5.79e-08,137;DOID:305,7.72e-08,106;DOID:8692,1.03e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@RNF44 | |||
}} |
Revision as of 15:01, 13 September 2013
Short description: | p3@RNF44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RNF44_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504160_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | D6RAW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.79e-17 | 53 |
common lymphoid progenitor | 2.79e-17 | 53 |
lymphoid lineage restricted progenitor cell | 2.95e-17 | 52 |
hematopoietic stem cell | 3.01e-13 | 168 |
hematopoietic cell | 1.31e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.02e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-11 | 161 |
T cell | 5.22e-09 | 25 |
pro-T cell | 5.22e-09 | 25 |
leukocyte | 2.38e-08 | 136 |
mature alpha-beta T cell | 2.87e-08 | 18 |
alpha-beta T cell | 2.87e-08 | 18 |
immature T cell | 2.87e-08 | 18 |
mature T cell | 2.87e-08 | 18 |
immature alpha-beta T cell | 2.87e-08 | 18 |
lymphocyte of B lineage | 4.66e-08 | 24 |
pro-B cell | 4.66e-08 | 24 |
nongranular leukocyte | 1.12e-07 | 115 |
B cell | 1.92e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.30e-11 | 235 |
disease of cellular proliferation | 4.27e-10 | 239 |
leukemia | 2.64e-09 | 39 |
hematologic cancer | 3.10e-09 | 51 |
immune system cancer | 3.10e-09 | 51 |
cell type cancer | 2.54e-08 | 143 |
germ cell and embryonal cancer | 4.39e-08 | 22 |
germ cell cancer | 4.39e-08 | 22 |
organ system cancer | 5.79e-08 | 137 |
carcinoma | 7.72e-08 | 106 |
myeloid leukemia | 1.03e-07 | 31 |
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