FFCP PHASE1:Hg19::chr5:175964245..175964273,-: Difference between revisions
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{{FFCP | 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106664911,7.85431242612679,1.0580536810308,0.743990036333503,1.38652688589425,0.432626562123789,2.27099564703142,5.24474745425739,5.57473404450323,11.5247377608439,12.2920006422158,13.4166553320874,13.7889146610806,2.04602485189246,3.21556956187414,1.65833887891756,1.44806194206653,1.0661699095049,1.66645102024618,5.42546842622451,5.02805185796449,3.02756028967656,1.14564884900697,1.21270313374932,1.52401723527873,0,3.16554649168561,1.14755528628282,0.665320713092027,4.96559938526944,3.73545710572004,1.9307228228694,1.43720323370539,2.34640942403454,1.1001729976458,1.22068853494722,1.99727032255654,2.81783311027437,1.28227396921293|short_description=p6@RNF44}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=22838 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19180 | |||
|TSSclassifier=S | |||
|UniProt=D6RAW5 | |||
|association_with_transcript=23bp_to_ENST00000504160_5end | |||
|description=CAGE_peak_6_at_RNF44_5end | |||
|id=chr5:175964245..175964273,- | |||
|ontology_enrichment_celltype=CL:0000838!3.12e-09!52;CL:0000542!7.41e-09!53;CL:0000051!7.41e-09!53;CL:0000066!1.63e-08!254;CL:0000084!1.01e-07!25;CL:0000827!1.01e-07!25;CL:0000791!6.47e-07!18;CL:0000789!6.47e-07!18;CL:0002420!6.47e-07!18;CL:0002419!6.47e-07!18;CL:0000790!6.47e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.74e-08;25!CL:0000791;4.38e-07;18!CL:0000789;4.38e-07;18!CL:0002419;4.38e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.13e-09,52;CL:0000542,3.92e-09,53;CL:0000051,3.92e-09,53;CL:0000084,5.01e-08,25;CL:0000827,5.01e-08,25;CL:0000066,7.48e-08,253;CL:0000791,2.93e-07,18;CL:0000789,2.93e-07,18;CL:0002420,2.93e-07,18;CL:0002419,2.93e-07,18;CL:0000790,2.93e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.38e-07;18 | |||
|ontology_enrichment_disease=DOID:162!2.48e-19!235;DOID:14566!2.95e-18!239;DOID:0050687!1.41e-17!143;DOID:305!3.03e-16!106;DOID:3095!2.22e-09!22;DOID:2994!2.22e-09!22;DOID:0050686!6.94e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.70e-10;22!DOID:2994;1.70e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.29e-19,235;DOID:14566,4.48e-18,239;DOID:0050687,1.60e-17,143;DOID:305,3.80e-16,106;DOID:3095,6.99e-10,22;DOID:2994,6.99e-10,22;DOID:0050686,9.52e-09,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p6@RNF44 | |||
}} |
Revision as of 15:01, 13 September 2013
Short description: | p6@RNF44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RNF44_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000504160_5end |
EntrezGene: | RNF44 |
HGNC: | 19180 |
UniProt: | D6RAW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.13e-09 | 52 |
lymphocyte | 3.92e-09 | 53 |
common lymphoid progenitor | 3.92e-09 | 53 |
T cell | 5.01e-08 | 25 |
pro-T cell | 5.01e-08 | 25 |
epithelial cell | 7.48e-08 | 253 |
mature alpha-beta T cell | 2.93e-07 | 18 |
alpha-beta T cell | 2.93e-07 | 18 |
immature T cell | 2.93e-07 | 18 |
mature T cell | 2.93e-07 | 18 |
immature alpha-beta T cell | 2.93e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.29e-19 | 235 |
disease of cellular proliferation | 4.48e-18 | 239 |
cell type cancer | 1.60e-17 | 143 |
carcinoma | 3.80e-16 | 106 |
germ cell and embryonal cancer | 6.99e-10 | 22 |
germ cell cancer | 6.99e-10 | 22 |
organ system cancer | 9.52e-09 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.