FFCP PHASE1:Mm9::chr17:34404272..34404290,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14961|HGNC=|MCL_coexpression_id=48|UniProt=|association_with_transcript=225bp_to_ENSMUST00000173103_5end|description=CAGE_peak_5_at_H2-Ab1_5end|id=chr17:34404272..34404290,+|ontology_enrichment_celltype=CL:0000553!2.79e-09!6;CL:0000556!2.79e-09!6|ontology_enrichment_celltype_v019_2=CL:0000553,3.68e-14,6;CL:0000556,3.68e-14,6;CL:0000839,2.14e-11,13;CL:0000945,1.63e-10,1;CL:0000236,1.63e-10,1;CL:0000826,1.63e-10,1;CL:0000050,1.20e-09,9;CL:0000763,2.56e-09,16;CL:0002031,4.08e-09,25;CL:0000049,6.84e-08,19;CL:0000988,3.99e-07,32;CL:0002032,3.99e-07,32;CL:0000037,3.99e-07,32;CL:0000837,3.99e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.38e-18!48;UBERON:0002390!2.38e-15!45;UBERON:0003061!2.38e-15!45;UBERON:0002405!9.95e-12!70;UBERON:0004177!4.12e-10!29;UBERON:0003408!6.65e-09!24;UBERON:0001007!7.13e-09!128;UBERON:0001555!7.13e-09!128;UBERON:0007026!7.13e-09!128;UBERON:0004119!1.48e-08!130;UBERON:0000925!1.48e-08!130;UBERON:0006595!1.48e-08!130;UBERON:0003081!1.98e-08!88;UBERON:0002370!5.07e-08!23;UBERON:0000974!5.07e-08!23;UBERON:0004807!5.07e-08!23;UBERON:0005058!5.07e-08!23;UBERON:0003351!5.07e-08!23;UBERON:0009113!5.07e-08!23;UBERON:0003295!5.07e-08!23;UBERON:0009722!5.07e-08!23;UBERON:0005562!5.07e-08!23;UBERON:0007690!5.07e-08!23;UBERON:0004923!6.90e-08!24;UBERON:0004921!1.10e-07!126;UBERON:0004185!1.10e-07!126;UBERON:0006562!1.56e-07!24;UBERON:0001557!1.56e-07!24;UBERON:0001042!1.56e-07!24;UBERON:0008814!1.56e-07!24;UBERON:0009145!1.56e-07!24;UBERON:0000344!1.57e-07!15;UBERON:0007023!5.94e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.12e-12,3;UBERON:0000029,4.59e-10,1;UBERON:0001097,4.59e-10,1;UBERON:0003968,4.59e-10,1;UBERON:0001467,4.59e-10,1;UBERON:0003199,1.03e-09,1;UBERON:0002371,2.56e-09,16;UBERON:0002193,9.89e-09,48;UBERON:0002405,9.89e-09,48;UBERON:0001474,7.54e-07,22;UBERON:0004765,7.54e-07,22;UBERON:0001434,7.54e-07,22|phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0,0,0,0,0,0.171217968225505,0,0,0,0.666219523631325,0.809901069559304,0.699561878128147,4.57420139769445,6.17014951225825,5.09267582157636,0.255129870453209,0,0,0.95995453676044,1.14704640533585,0,0.430761996159075,0,1.33016393619462,0.756090389279792,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39582593923324,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,1.32167513193519,0,0,0,0,0,0,0,0.474529061544512,0,0,0.397912944082302,0,0.898819408654221,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.433947175744535,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,1.53783792718067,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0.51968329191118,0.537080087002444,0.79472541912506,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.302478555410522,0.584747284438515,0.192423683280659,0.350630706544707,0,0,0,0,0.19318959403219,0.375364950902364,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@H2-Ab1}} | ||
|EntrezGene=14961 | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt= | |||
|association_with_transcript=225bp_to_ENSMUST00000173103_5end | |||
|description=CAGE_peak_5_at_H2-Ab1_5end | |||
|id=chr17:34404272..34404290,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.79e-09!6;CL:0000556!2.79e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.68e-14,6;CL:0000556,3.68e-14,6;CL:0000839,2.14e-11,13;CL:0000945,1.63e-10,1;CL:0000236,1.63e-10,1;CL:0000826,1.63e-10,1;CL:0000050,1.20e-09,9;CL:0000763,2.56e-09,16;CL:0002031,4.08e-09,25;CL:0000049,6.84e-08,19;CL:0000988,3.99e-07,32;CL:0002032,3.99e-07,32;CL:0000037,3.99e-07,32;CL:0000837,3.99e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.38e-18!48;UBERON:0002390!2.38e-15!45;UBERON:0003061!2.38e-15!45;UBERON:0002405!9.95e-12!70;UBERON:0004177!4.12e-10!29;UBERON:0003408!6.65e-09!24;UBERON:0001007!7.13e-09!128;UBERON:0001555!7.13e-09!128;UBERON:0007026!7.13e-09!128;UBERON:0004119!1.48e-08!130;UBERON:0000925!1.48e-08!130;UBERON:0006595!1.48e-08!130;UBERON:0003081!1.98e-08!88;UBERON:0002370!5.07e-08!23;UBERON:0000974!5.07e-08!23;UBERON:0004807!5.07e-08!23;UBERON:0005058!5.07e-08!23;UBERON:0003351!5.07e-08!23;UBERON:0009113!5.07e-08!23;UBERON:0003295!5.07e-08!23;UBERON:0009722!5.07e-08!23;UBERON:0005562!5.07e-08!23;UBERON:0007690!5.07e-08!23;UBERON:0004923!6.90e-08!24;UBERON:0004921!1.10e-07!126;UBERON:0004185!1.10e-07!126;UBERON:0006562!1.56e-07!24;UBERON:0001557!1.56e-07!24;UBERON:0001042!1.56e-07!24;UBERON:0008814!1.56e-07!24;UBERON:0009145!1.56e-07!24;UBERON:0000344!1.57e-07!15;UBERON:0007023!5.94e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.12e-12,3;UBERON:0000029,4.59e-10,1;UBERON:0001097,4.59e-10,1;UBERON:0003968,4.59e-10,1;UBERON:0001467,4.59e-10,1;UBERON:0003199,1.03e-09,1;UBERON:0002371,2.56e-09,16;UBERON:0002193,9.89e-09,48;UBERON:0002405,9.89e-09,48;UBERON:0001474,7.54e-07,22;UBERON:0004765,7.54e-07,22;UBERON:0001434,7.54e-07,22 | |||
|phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0,0,0,0,0,0.171217968225505,0,0,0,0.666219523631325,0.809901069559304,0.699561878128147,4.57420139769445,6.17014951225825,5.09267582157636,0.255129870453209,0,0,0.95995453676044,1.14704640533585,0,0.430761996159075,0,1.33016393619462,0.756090389279792,0,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.39582593923324,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.148442139064825,0,0,0,0,0,0,0,0.722996784599558,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,1.32167513193519,0,0,0,0,0,0,0,0.474529061544512,0,0,0.397912944082302,0,0.898819408654221,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.433947175744535,3.01582567878545,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,1.53783792718067,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0.51968329191118,0.537080087002444,0.79472541912506,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.302478555410522,0.584747284438515,0.192423683280659,0.350630706544707,0,0,0,0,0.19318959403219,0.375364950902364,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@H2-Ab1 | |||
}} |
Revision as of 14:13, 13 September 2013
Short description: | p5@H2-Ab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_H2-Ab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 225bp_to_ENSMUST00000173103_5end |
EntrezGene: | H2-Ab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.68e-14 | 6 |
megakaryocyte | 3.68e-14 | 6 |
myeloid lineage restricted progenitor cell | 2.14e-11 | 13 |
lymphocyte of B lineage | 1.63e-10 | 1 |
B cell | 1.63e-10 | 1 |
pro-B cell | 1.63e-10 | 1 |
megakaryocyte-erythroid progenitor cell | 1.20e-09 | 9 |
myeloid cell | 2.56e-09 | 16 |
hematopoietic lineage restricted progenitor cell | 4.08e-09 | 25 |
common myeloid progenitor | 6.84e-08 | 19 |
hematopoietic cell | 3.99e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.99e-07 | 32 |
hematopoietic stem cell | 3.99e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.99e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.12e-12 | 3 |
lymph node | 4.59e-10 | 1 |
axillary lymph node | 4.59e-10 | 1 |
peripheral lymph node | 4.59e-10 | 1 |
shoulder | 4.59e-10 | 1 |
egg chamber | 1.03e-09 | 1 |
bone marrow | 2.56e-09 | 16 |
hemolymphoid system | 9.89e-09 | 48 |
immune system | 9.89e-09 | 48 |
bone element | 7.54e-07 | 22 |
skeletal element | 7.54e-07 | 22 |
skeletal system | 7.54e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.