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FFCP PHASE1:Mm9::chr17:34258335..34258350,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34258335..34258350,+|id=chr17:34258335..34258350,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,1.08e-12,6;CL:0002489,1.08e-12,6;CL:0000898,1.08e-12,6;CL:0000809,1.08e-12,6;CL:0000810,1.08e-12,6;CL:0000895,1.08e-12,6;CL:0000808,1.08e-12,6;CL:0000894,1.08e-12,6;CL:0000806,1.08e-12,6;CL:0000807,1.08e-12,6;CL:0000805,1.08e-12,6;CL:0002425,1.08e-12,6;CL:0002436,1.08e-12,6;CL:0002427,1.08e-12,6;CL:0002428,1.08e-12,6;CL:0002429,1.08e-12,6;CL:0002433,1.08e-12,6;CL:0002431,1.08e-12,6;CL:0002432,1.08e-12,6;CL:0000988,2.69e-10,32;CL:0002032,2.69e-10,32;CL:0000037,2.69e-10,32;CL:0000837,2.69e-10,32;CL:0002320,3.14e-10,46;CL:0000134,3.14e-10,46;CL:0000624,1.50e-09,8;CL:0000791,1.68e-08,9;CL:0000789,1.68e-08,9;CL:0002420,1.68e-08,9;CL:0002419,1.68e-08,9;CL:0000790,1.68e-08,9;CL:0000219,1.88e-08,54;CL:0002031,3.02e-08,25;CL:0002293,2.27e-07,3;CL:0000084,5.70e-07,11;CL:0000827,5.70e-07,11;CL:0000764,7.34e-07,3;CL:0000765,7.34e-07,3;CL:0000038,7.34e-07,3;CL:0000547,7.34e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,7.34e-07,3;DOID:0060083,7.34e-07,3;DOID:1240,7.34e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.14e-10,46;UBERON:0002390,4.93e-07,45;UBERON:0003061,4.93e-07,45;UBERON:0002370,6.38e-07,23;UBERON:0000974,6.38e-07,23;UBERON:0004807,6.38e-07,23;UBERON:0005058,6.38e-07,23;UBERON:0003351,6.38e-07,23;UBERON:0009113,6.38e-07,23;UBERON:0003295,6.38e-07,23;UBERON:0009722,6.38e-07,23;UBERON:0005562,6.38e-07,23;UBERON:0007690,6.38e-07,23|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.129123323441576,5.06839399746,2.57470978954193,1.36974374580404,1.83475965689274,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0.221730510655305,1.90509202037889,1.23012957516914,0,0.288851619751275,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,0.734187008646726,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,1.3498495759221,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.479227355091182,0,0,0.127687338085188,0.46081959976873,0,0.274462930807229,0,0.558365998002762,0,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,1.73918693221007,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0.281686839553361,0,2.54805239706646,7.11066703153331,0,0,0,0,0.776813650941515,0.445326417194474,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0.838705871541442,1.79970819298022,0.127070227073065,0.599162557619291,0,0.376963056338593,0.347648640384553,0.511430914660661,0.62336413367868,0.973447578406546,0,0.248813941220186,1.0108910337347,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.527853372491847,0,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0.772043721344145,1.42081749697796,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.486412857275134,0.438599962275997,0.219550115291051,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.738050739898011,0,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.575392274901621,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.469380496577004,0.837531287209079,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0.491589944147214,0,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0.642202359951168,0,0,0,0,0.780877488593277,0.430846795465598,0,0.668396022247182,0.566153061577665,0,0.292255857911312,0.790575555893047,0.963963949265421,0.425820255624806,0.534196811001766,0.325773918707152,0.494910368917606,1.32745138339963,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,1.05418608574999,0,2.04263763452273,0,0,0,0.532020700926821,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0.441056796109924,1.15420377059036,0.161464426695906,0.482503399425247,0,0.328281799490123,0,0.556275906031529,0,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0.149516546043979,0,0,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,0,0.183151624267265,0,1.50471631210609,0,0,0.572895513439397,0,0,0,0,0.900642406448441,0.453142408984205,0,0,1.19707462020309,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0|short_description=p@chr17:34258335..34258350,+}}
|EntrezGene=NA
|HGNC=
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr17:34258335..34258350,+
|id=chr17:34258335..34258350,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000893,1.08e-12,6;CL:0002489,1.08e-12,6;CL:0000898,1.08e-12,6;CL:0000809,1.08e-12,6;CL:0000810,1.08e-12,6;CL:0000895,1.08e-12,6;CL:0000808,1.08e-12,6;CL:0000894,1.08e-12,6;CL:0000806,1.08e-12,6;CL:0000807,1.08e-12,6;CL:0000805,1.08e-12,6;CL:0002425,1.08e-12,6;CL:0002436,1.08e-12,6;CL:0002427,1.08e-12,6;CL:0002428,1.08e-12,6;CL:0002429,1.08e-12,6;CL:0002433,1.08e-12,6;CL:0002431,1.08e-12,6;CL:0002432,1.08e-12,6;CL:0000988,2.69e-10,32;CL:0002032,2.69e-10,32;CL:0000037,2.69e-10,32;CL:0000837,2.69e-10,32;CL:0002320,3.14e-10,46;CL:0000134,3.14e-10,46;CL:0000624,1.50e-09,8;CL:0000791,1.68e-08,9;CL:0000789,1.68e-08,9;CL:0002420,1.68e-08,9;CL:0002419,1.68e-08,9;CL:0000790,1.68e-08,9;CL:0000219,1.88e-08,54;CL:0002031,3.02e-08,25;CL:0002293,2.27e-07,3;CL:0000084,5.70e-07,11;CL:0000827,5.70e-07,11;CL:0000764,7.34e-07,3;CL:0000765,7.34e-07,3;CL:0000038,7.34e-07,3;CL:0000547,7.34e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:2531,7.34e-07,3;DOID:0060083,7.34e-07,3;DOID:1240,7.34e-07,3
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.14e-10,46;UBERON:0002390,4.93e-07,45;UBERON:0003061,4.93e-07,45;UBERON:0002370,6.38e-07,23;UBERON:0000974,6.38e-07,23;UBERON:0004807,6.38e-07,23;UBERON:0005058,6.38e-07,23;UBERON:0003351,6.38e-07,23;UBERON:0009113,6.38e-07,23;UBERON:0003295,6.38e-07,23;UBERON:0009722,6.38e-07,23;UBERON:0005562,6.38e-07,23;UBERON:0007690,6.38e-07,23
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.129123323441576,5.06839399746,2.57470978954193,1.36974374580404,1.83475965689274,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0.221730510655305,1.90509202037889,1.23012957516914,0,0.288851619751275,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,0.734187008646726,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,1.3498495759221,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.479227355091182,0,0,0.127687338085188,0.46081959976873,0,0.274462930807229,0,0.558365998002762,0,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,1.73918693221007,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0.70667914902068,0.281686839553361,0,2.54805239706646,7.11066703153331,0,0,0,0,0.776813650941515,0.445326417194474,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0.838705871541442,1.79970819298022,0.127070227073065,0.599162557619291,0,0.376963056338593,0.347648640384553,0.511430914660661,0.62336413367868,0.973447578406546,0,0.248813941220186,1.0108910337347,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.527853372491847,0,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0.772043721344145,1.42081749697796,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0.486412857275134,0.438599962275997,0.219550115291051,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.738050739898011,0,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.575392274901621,0,0,0,0,0.312037673114561,0.505157755894224,0,0,0.369506380333209,0,0.162964976442026,0.169745085775188,0.469380496577004,0.837531287209079,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0.491589944147214,0,0.144649058581512,1.50791283939272,0,0,0.275936746304732,0.642202359951168,0,0,0,0,0.780877488593277,0.430846795465598,0,0.668396022247182,0.566153061577665,0,0.292255857911312,0.790575555893047,0.963963949265421,0.425820255624806,0.534196811001766,0.325773918707152,0.494910368917606,1.32745138339963,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0.632073515871632,1.05418608574999,0,2.04263763452273,0,0,0,0.532020700926821,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0.441056796109924,1.15420377059036,0.161464426695906,0.482503399425247,0,0.328281799490123,0,0.556275906031529,0,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.330613822901344,0,0,0,0,0.149516546043979,0,0,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,0,0.183151624267265,0,1.50471631210609,0,0,0.572895513439397,0,0,0,0,0.900642406448441,0.453142408984205,0,0,1.19707462020309,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0
|short_description=p@chr17:34258335..34258350,+
}}

Revision as of 14:11, 13 September 2013

Short description:p@chr17:34258335..34258350, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr17:34258335..34258350, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr17:34258335..34258350+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
thymocyte1.08e-126
double negative thymocyte1.08e-126
naive T cell1.08e-126
double-positive, alpha-beta thymocyte1.08e-126
CD4-positive, alpha-beta thymocyte1.08e-126
naive thymus-derived CD4-positive, alpha-beta T cell1.08e-126
DN4 thymocyte1.08e-126
DN1 thymic pro-T cell1.08e-126
DN2 thymocyte1.08e-126
DN3 thymocyte1.08e-126
immature single positive thymocyte1.08e-126
early T lineage precursor1.08e-126
mature CD4 single-positive thymocyte1.08e-126
resting double-positive thymocyte1.08e-126
double-positive blast1.08e-126
CD69-positive double-positive thymocyte1.08e-126
CD69-positive, CD4-positive single-positive thymocyte1.08e-126
CD4-positive, CD8-intermediate double-positive thymocyte1.08e-126
CD24-positive, CD4 single-positive thymocyte1.08e-126
hematopoietic cell2.69e-1032
hematopoietic oligopotent progenitor cell2.69e-1032
hematopoietic stem cell2.69e-1032
hematopoietic multipotent progenitor cell2.69e-1032
connective tissue cell3.14e-1046
mesenchymal cell3.14e-1046
CD4-positive, alpha-beta T cell1.50e-098
mature alpha-beta T cell1.68e-089
alpha-beta T cell1.68e-089
immature T cell1.68e-089
mature T cell1.68e-089
immature alpha-beta T cell1.68e-089
motile cell1.88e-0854
hematopoietic lineage restricted progenitor cell3.02e-0825
epithelial cell of thymus2.27e-073
T cell5.70e-0711
pro-T cell5.70e-0711
erythroid lineage cell7.34e-073
erythroblast7.34e-073
erythroid progenitor cell7.34e-073
proerythroblast7.34e-073

Uber anatomy
Ontology termp-valuen
connective tissue3.14e-1046
hematopoietic system4.93e-0745
blood island4.93e-0745
thymus6.38e-0723
neck6.38e-0723
respiratory system epithelium6.38e-0723
hemolymphoid system gland6.38e-0723
pharyngeal epithelium6.38e-0723
thymic region6.38e-0723
pharyngeal gland6.38e-0723
entire pharyngeal arch endoderm6.38e-0723
thymus primordium6.38e-0723
early pharyngeal endoderm6.38e-0723

Disease
Ontology termp-valuen
hematologic cancer7.34e-073
immune system cancer7.34e-073
leukemia7.34e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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