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FFCP PHASE1:Mm9::chr17:27693788..27693803,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=111241,15361|HGNC=|MCL_coexpression_id=1706|UniProt=P17095|association_with_transcript=175bp_to_ENSMUST00000117254,ENSMUST00000118570_5end|description=CAGE_peak_3_at_Hmga1_5end,CAGE_peak_4_at_Hmga1-rs1_5end|id=chr17:27693788..27693803,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.63e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.12e-08,47;UBERON:0000160,2.09e-08,31|phase1_expression=2.40223270657191,6.63053274514786,6.82498859084304,0.60492842261366,1.50268718983904,16.6200479192771,12.1478573109673,2.1950964985068,1.97104211012333,1.40438715793196,0.34243593645101,0.797721589953364,1.54080656938085,0.611942816932982,0.666219523631325,1.61980213911861,0.699561878128147,0.473193248037357,0.548457734422955,0.84877930359606,1.02051948181284,3.17731043842833,2.35079810225042,8.63959083084396,5.96464130774642,5.16808767703518,9.90752591165872,8.61884930743556,5.32065574477847,7.05684363327806,21.7295900442199,10.1604907753541,14.1464901144451,0,27.1520522566198,29.7560015191701,30.6254034393554,0,0.7813353445238,0.523523743973798,0.588231488031014,0,1.45653105909346,9.06457089424156,8.51566222243922,8.62669735159903,7.82391344348039,4.36050312760893,4.61340983742391,1.74986909166855,7.27929392451885,4.31257693094915,1.34226084846189,2.17608642603403,1.00828139742739,4.63066984864705,2.29226751951005,1.54701627683233,3.23706337375356,3.1739458756322,5.07065122804943,11.5207140903505,6.22506357277798,7.64914759689189,9.88866362566974,14.209602298922,5.09320187881288,4.2264013585371,2.59224030771194,2.16009501330705,2.94454945891935,4.57041575046086,4.19650227808066,3.55223317723367,6.61333750025831,2.75765635983006,3.30347642998166,5.36286819957788,5.52983519722476,4.74790635828698,3.65950574409639,4.68822033501084,6.42120897703176,3.37657566019008,3.66715794664344,5.59794312399969,3.13217697758026,3.72798891650601,64.1400857532069,47.3833681869545,1.15945795480671,0.860423876981386,12.9194553404473,0.539703191637817,0,0.448026887097336,1.12355536105401,3.91989741929533,2.07828803682295,2.12003744706204,1.40843419776681,1.28326477414318,0,0,14.2884087067401,18.2419103142071,15.6712577954583,2.2836775943812,2.07150306917737,1.7813056687779,10.235634279202,6.69824052286711,6.6878494204257,4.82312449768392,5.29149182110672,1.0053327306374,0.741584903203122,1.01219549843938,0,2.42650274921114,1.98757366614354,0,1.86391761218122,4.39171195517321,4.60782754989601,10.2182822083437,7.78798309288482,5.99902730993408,6.98886248901856,5.24267237916879,0.457500602818626,2.1361239859187,1.91206752211504,0.511430914660661,5.81806524766768,3.73154905055843,2.64782346010822,1.24406970610093,2.0217820674694,5.05060454127538,9.49879233627737,6.66716102857071,11.5239763075424,8.89158425230719,26.5342346690179,14.8611915530426,11.6190138454064,3.88055056108524,7.97601573851516,6.99692496620931,6.862093842394,6.1374805079721,2.78047249225598,1.0447564995665,0.823128545631774,5.17489093728082,4.21327912387941,6.17634977075316,5.68326998791185,6.00664740352955,5.15957331958412,3.78130329068131,4.26140524053378,3.34499193970586,4.01094493507183,1.62773761325285,2.68273401399619,2.56883753207773,2.63295759861569,1.80584210487005,2.67527071501324,1.90059983652932,1.3173006917463,1.47627060636409,1.26173969138476,1.9551876352064,0.660837565967596,21.1560453330835,12.3707185310436,6.27039014023184,9.92279452180119,8.67239155880373,8.2279876222602,6.08722003560189,10.9141684155238,8.07024878147653,6.03204501120647,8.95304124185179,8.18849165900304,10.7858329038507,7.99710784536369,7.76650965692032,16.311439481965,7.42615331963237,13.5249282807697,4.2766778847516,3.49114476901726,5.40045813155453,2.40298841072178,0.590440591918409,1.41298855057237,1.60416313098341,0.296452627087149,2.33583148002532,3.73462090715086,3.14806957338795,3.24576194221605,2.17059443777175,2.03700681425136,1.15078454980324,2.7562988551756,1.37280706594041,1.43768206527355,1.86070473834252,1.87222603868736,0.757736633841335,1.4351793081753,0.482443521363367,1.47802552133284,8.7166049414423,7.82231886921724,6.45031325945715,5.16318546234705,4.35516269348721,2.38043640886014,2.92700471786698,1.7339865851681,2.21464689648775,0.956728611944923,1.14704320301017,0.345369963731791,1.01254341007058,4.52373851817817,3.80733978673097,1.47529281905711,0.275936746304732,6.26147300952389,6.32943107597897,16.8852993737976,2.7771801992481,11.042787679569,12.1036010731958,9.26320610251035,11.2315335037699,6.46116154838943,5.66153061577665,10.9298889452221,9.64444331107329,13.0444966722353,0.963963949265421,0.567760340833074,1.95872164033981,2.93196526836437,1.15479086080775,1.32745138339963,7.28341908464944,9.06970670894253,5.46954731292105,3.54362271456927,2.15204603560749,3.35956781118687,4.36240475373007,2.85197902707777,3.47640433729398,1.05418608574999,1.03135543248187,1.70219802876894,7.20244376125241,11.5129228566652,8.3591443662321,6.7389288784064,6.42127743367454,4.11372551505302,7.30715877875038,1.87737366450968,1.0591603543191,1.10264199027481,7.58476763530808,4.84393280087717,4.644095219468,5.84924485615369,7.38634048852776,10.4933101186746,6.30446026835733,1.36696704638282,3.714963623338,1.29636169158798,2.63715839806567,1.50363650493128,1.83022538565218,15.6380155594347,13.1554365184239,14.0963973280512,13.3653886522116,16.1331356726379,7.72613975082025,8.96444328820951,8.36353184057875,6.98760203987768,6.47348862647139,9.91841468704031,3.40282724579238,4.79575401179634,0,1.12738587736838,1.79419855252775,2.15096037594227,0.972255941720238,1.29159823477731,1.18269287843545,1.64300134104056,2.0832701575032,5.66240459898839,0.724752362478018,1.72818003754719,0,3.44632865993279,3.90301637226344,3.37794139742267,3.75956060901711,2.58285761215644,2.52410443991935,2.65841148914239,2.52416124870369,3.35309949281999,2.01652370273681,1.8516997340553,1.53938946624527,1.40252282617883,2.0405734525369,1.10992976687032,5.11368982674011,2.18250001273302,8.88672132548076,1.31377732815827,2.38097111547445,3.64426244434412,2.50786052017682,1.12950368523413,0.920650473014354,2.29158205375759,1.20297227640581,1.37016503954128,1.5107877947794,0,2.2516060161211,0.453142408984205,1.03552062350364,11.0014588439227,9.57659696162474,4.26834014385335,3.40349403895612,3.5634237646757,3.8607136774503,2.889207461421,2.06035057238894,4.1719497246936,3.03236654116557,3.29523089857312,2.07488975524684,1.591905626988,2.56100609619477,2.41228969613576,4.28664322154766,2.54945517078682,2.31491064556446,1.23625770240992,2.20798380201596,3.42869252385415,3.90446773550542,2.86123427936785,2.47088908274958,2.25862512996793,3.04612588410035,1.64635175585495,2.36762740294059,1.7654534799962,1.68342681497322,2.72860541685601,2.1670986122624,2.45538625901814,3.56354734727722,3.47231899766054,3.49734809113124,2.57324769289949,3.86767897286937,4.3996316375834,2.20591419119516,1.15933917810211|short_description=p3@Hmga1,p4@Hmga1-rs1}}
|EntrezGene=111241,15361
|HGNC=
|MCL_coexpression_id=1706
|UniProt=P17095
|association_with_transcript=175bp_to_ENSMUST00000117254,ENSMUST00000118570_5end
|description=CAGE_peak_3_at_Hmga1_5end,CAGE_peak_4_at_Hmga1-rs1_5end
|id=chr17:27693788..27693803,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!2.63e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.12e-08,47;UBERON:0000160,2.09e-08,31
|phase1_expression=2.40223270657191,6.63053274514786,6.82498859084304,0.60492842261366,1.50268718983904,16.6200479192771,12.1478573109673,2.1950964985068,1.97104211012333,1.40438715793196,0.34243593645101,0.797721589953364,1.54080656938085,0.611942816932982,0.666219523631325,1.61980213911861,0.699561878128147,0.473193248037357,0.548457734422955,0.84877930359606,1.02051948181284,3.17731043842833,2.35079810225042,8.63959083084396,5.96464130774642,5.16808767703518,9.90752591165872,8.61884930743556,5.32065574477847,7.05684363327806,21.7295900442199,10.1604907753541,14.1464901144451,0,27.1520522566198,29.7560015191701,30.6254034393554,0,0.7813353445238,0.523523743973798,0.588231488031014,0,1.45653105909346,9.06457089424156,8.51566222243922,8.62669735159903,7.82391344348039,4.36050312760893,4.61340983742391,1.74986909166855,7.27929392451885,4.31257693094915,1.34226084846189,2.17608642603403,1.00828139742739,4.63066984864705,2.29226751951005,1.54701627683233,3.23706337375356,3.1739458756322,5.07065122804943,11.5207140903505,6.22506357277798,7.64914759689189,9.88866362566974,14.209602298922,5.09320187881288,4.2264013585371,2.59224030771194,2.16009501330705,2.94454945891935,4.57041575046086,4.19650227808066,3.55223317723367,6.61333750025831,2.75765635983006,3.30347642998166,5.36286819957788,5.52983519722476,4.74790635828698,3.65950574409639,4.68822033501084,6.42120897703176,3.37657566019008,3.66715794664344,5.59794312399969,3.13217697758026,3.72798891650601,64.1400857532069,47.3833681869545,1.15945795480671,0.860423876981386,12.9194553404473,0.539703191637817,0,0.448026887097336,1.12355536105401,3.91989741929533,2.07828803682295,2.12003744706204,1.40843419776681,1.28326477414318,0,0,14.2884087067401,18.2419103142071,15.6712577954583,2.2836775943812,2.07150306917737,1.7813056687779,10.235634279202,6.69824052286711,6.6878494204257,4.82312449768392,5.29149182110672,1.0053327306374,0.741584903203122,1.01219549843938,0,2.42650274921114,1.98757366614354,0,1.86391761218122,4.39171195517321,4.60782754989601,10.2182822083437,7.78798309288482,5.99902730993408,6.98886248901856,5.24267237916879,0.457500602818626,2.1361239859187,1.91206752211504,0.511430914660661,5.81806524766768,3.73154905055843,2.64782346010822,1.24406970610093,2.0217820674694,5.05060454127538,9.49879233627737,6.66716102857071,11.5239763075424,8.89158425230719,26.5342346690179,14.8611915530426,11.6190138454064,3.88055056108524,7.97601573851516,6.99692496620931,6.862093842394,6.1374805079721,2.78047249225598,1.0447564995665,0.823128545631774,5.17489093728082,4.21327912387941,6.17634977075316,5.68326998791185,6.00664740352955,5.15957331958412,3.78130329068131,4.26140524053378,3.34499193970586,4.01094493507183,1.62773761325285,2.68273401399619,2.56883753207773,2.63295759861569,1.80584210487005,2.67527071501324,1.90059983652932,1.3173006917463,1.47627060636409,1.26173969138476,1.9551876352064,0.660837565967596,21.1560453330835,12.3707185310436,6.27039014023184,9.92279452180119,8.67239155880373,8.2279876222602,6.08722003560189,10.9141684155238,8.07024878147653,6.03204501120647,8.95304124185179,8.18849165900304,10.7858329038507,7.99710784536369,7.76650965692032,16.311439481965,7.42615331963237,13.5249282807697,4.2766778847516,3.49114476901726,5.40045813155453,2.40298841072178,0.590440591918409,1.41298855057237,1.60416313098341,0.296452627087149,2.33583148002532,3.73462090715086,3.14806957338795,3.24576194221605,2.17059443777175,2.03700681425136,1.15078454980324,2.7562988551756,1.37280706594041,1.43768206527355,1.86070473834252,1.87222603868736,0.757736633841335,1.4351793081753,0.482443521363367,1.47802552133284,8.7166049414423,7.82231886921724,6.45031325945715,5.16318546234705,4.35516269348721,2.38043640886014,2.92700471786698,1.7339865851681,2.21464689648775,0.956728611944923,1.14704320301017,0.345369963731791,1.01254341007058,4.52373851817817,3.80733978673097,1.47529281905711,0.275936746304732,6.26147300952389,6.32943107597897,16.8852993737976,2.7771801992481,11.042787679569,12.1036010731958,9.26320610251035,11.2315335037699,6.46116154838943,5.66153061577665,10.9298889452221,9.64444331107329,13.0444966722353,0.963963949265421,0.567760340833074,1.95872164033981,2.93196526836437,1.15479086080775,1.32745138339963,7.28341908464944,9.06970670894253,5.46954731292105,3.54362271456927,2.15204603560749,3.35956781118687,4.36240475373007,2.85197902707777,3.47640433729398,1.05418608574999,1.03135543248187,1.70219802876894,7.20244376125241,11.5129228566652,8.3591443662321,6.7389288784064,6.42127743367454,4.11372551505302,7.30715877875038,1.87737366450968,1.0591603543191,1.10264199027481,7.58476763530808,4.84393280087717,4.644095219468,5.84924485615369,7.38634048852776,10.4933101186746,6.30446026835733,1.36696704638282,3.714963623338,1.29636169158798,2.63715839806567,1.50363650493128,1.83022538565218,15.6380155594347,13.1554365184239,14.0963973280512,13.3653886522116,16.1331356726379,7.72613975082025,8.96444328820951,8.36353184057875,6.98760203987768,6.47348862647139,9.91841468704031,3.40282724579238,4.79575401179634,0,1.12738587736838,1.79419855252775,2.15096037594227,0.972255941720238,1.29159823477731,1.18269287843545,1.64300134104056,2.0832701575032,5.66240459898839,0.724752362478018,1.72818003754719,0,3.44632865993279,3.90301637226344,3.37794139742267,3.75956060901711,2.58285761215644,2.52410443991935,2.65841148914239,2.52416124870369,3.35309949281999,2.01652370273681,1.8516997340553,1.53938946624527,1.40252282617883,2.0405734525369,1.10992976687032,5.11368982674011,2.18250001273302,8.88672132548076,1.31377732815827,2.38097111547445,3.64426244434412,2.50786052017682,1.12950368523413,0.920650473014354,2.29158205375759,1.20297227640581,1.37016503954128,1.5107877947794,0,2.2516060161211,0.453142408984205,1.03552062350364,11.0014588439227,9.57659696162474,4.26834014385335,3.40349403895612,3.5634237646757,3.8607136774503,2.889207461421,2.06035057238894,4.1719497246936,3.03236654116557,3.29523089857312,2.07488975524684,1.591905626988,2.56100609619477,2.41228969613576,4.28664322154766,2.54945517078682,2.31491064556446,1.23625770240992,2.20798380201596,3.42869252385415,3.90446773550542,2.86123427936785,2.47088908274958,2.25862512996793,3.04612588410035,1.64635175585495,2.36762740294059,1.7654534799962,1.68342681497322,2.72860541685601,2.1670986122624,2.45538625901814,3.56354734727722,3.47231899766054,3.49734809113124,2.57324769289949,3.86767897286937,4.3996316375834,2.20591419119516,1.15933917810211
|short_description=p3@Hmga1,p4@Hmga1-rs1
}}

Revision as of 13:53, 13 September 2013

Short description:p3@Hmga1, p4@Hmga1-rs1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Hmga1_5end, CAGE_peak_4_at_Hmga1-rs1_5end
Coexpression cluster:MCL_coexpression_mm9:1706
Association with transcript: 175bp_to_ENSMUST00000117254, ENSMUST00000118570_5end
EntrezGene:111241,15361
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Hmga1p4@Hmga1-rs1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.15
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C821.73
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F527.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F629.76
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F730.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.52
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D964.14
Mouse Schwann, donor2.CNhs12573.11746-123F947.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C510.24
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C69.50
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C911.52
eyeball, embryo E17.CNhs11023.1261-18D48.89
eyeball, neonate N00.CNhs11207.633-15C626.53
eyeball, neonate N01.CNhs11140.1532-43E714.86
eyeball, neonate N02.CNhs11205.1551-44G811.62
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E27.98
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A321.16
intestine, embryo E12.CNhs11019.1251-16I512.37
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D89.92
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E98.07
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A58.19
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I916.31
kidney, embryo E15.CNhs10997.434-16F87.43
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G75.40
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G28.72
lung, embryo E14.CNhs10604.404-26F87.82
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C711.51
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C37.58
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I55.85
skin, neonate N10.CNhs11108.762-6C47.39
small intestine, neonate N16.CNhs11114.790-21I110.49
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.10
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E316.13
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D48.96
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A99.92
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D95.66
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.90
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D33.35
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I811.00
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.12e-0847
intestine2.09e-0831







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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