FFCP PHASE1:Hg19::chr5:133477868..133477885,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6932|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11639|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000517855_5end|coexpression_cluster_id=C1525|description=CAGE_peak_13_at_TCF7_5end|id=chr5:133477868..133477885,+|ontology_enrichment_celltype=CL:0000084!6.19e-14!25;CL:0000827!6.19e-14!25;CL:0000542!9.87e-13!53;CL:0000051!9.87e-13!53;CL:0000838!5.69e-12!52;CL:0000791!2.64e-11!18;CL:0000789!2.64e-11!18;CL:0002420!2.64e-11!18;CL:0002419!2.64e-11!18;CL:0000790!2.64e-11!18;CL:0000624!2.97e-07!6;CL:0000625!8.15e-07!11|ontology_enrichment_celltype_v019=CL:0000226;2.34e-14;3!CL:0000842;2.34e-14;3!CL:0000084;4.85e-14;25!CL:0000791;4.07e-09;18!CL:0000789;4.07e-09;18!CL:0002419;4.07e-09;18!CL:0000624;1.01e-07;6|ontology_enrichment_celltype_v019_2=CL:0000226,3.17e-14,3;CL:0000842,3.17e-14,3;CL:0000084,4.74e-14,25;CL:0000827,4.74e-14,25;CL:0000791,3.70e-09,18;CL:0000789,3.70e-09,18;CL:0002420,3.70e-09,18;CL:0002419,3.70e-09,18;CL:0000790,3.70e-09,18;CL:0000838,1.01e-08,52;CL:0000542,1.52e-08,53;CL:0000051,1.52e-08,53;CL:0000624,9.26e-08,6|ontology_enrichment_development_v019=CL:0000790;4.07e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.78e-07!7|ontology_enrichment_uberon_v019=UBERON:0002370;4.94e-21;2!UBERON:0005058;4.94e-21;2!UBERON:0009113;4.94e-21;2!UBERON:0000178;6.66e-11;15!UBERON:0000179;6.66e-11;15!UBERON:0000463;6.66e-11;15!UBERON:0002390;6.42e-10;32!UBERON:0004177;5.60e-09;5!UBERON:0005057;5.60e-09;5!UBERON:0002193;6.92e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.44e-11,4;UBERON:0005058,5.44e-11,4;UBERON:0009113,5.44e-11,4;UBERON:0003295,5.44e-11,4;UBERON:0005562,5.44e-11,4;UBERON:0000178,7.30e-11,15;UBERON:0000179,7.30e-11,15;UBERON:0000463,7.30e-11,15;UBERON:0003351,1.29e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.458480434487708,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,3.53709686474248,2.67281948699362,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0.276350017785848,0.869409257205157,1.92772532110679,1.87278579662799,3.1360657141493,0.226618685395132,0.383220493601921,0.68725489096526,0.506039384039006,0.95569624297229,0,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0,0.80642697289893,1.33720097891754,1.88271725047639,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.788123040807709,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,3.45142721309787,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.732555718546747,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.822724546172388,0,0.540031437238115,2.37937552888281,0.106824071127473,0,0,0.185803175125719,0,1.28055318027145,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,4.08773192782946,0,0,0,0.392125068635479,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11639 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000517855_5end | |||
|coexpression_cluster_id=C1525 | |||
|description=CAGE_peak_13_at_TCF7_5end | |||
|id=chr5:133477868..133477885,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.19e-14!25;CL:0000827!6.19e-14!25;CL:0000542!9.87e-13!53;CL:0000051!9.87e-13!53;CL:0000838!5.69e-12!52;CL:0000791!2.64e-11!18;CL:0000789!2.64e-11!18;CL:0002420!2.64e-11!18;CL:0002419!2.64e-11!18;CL:0000790!2.64e-11!18;CL:0000624!2.97e-07!6;CL:0000625!8.15e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000226;2.34e-14;3!CL:0000842;2.34e-14;3!CL:0000084;4.85e-14;25!CL:0000791;4.07e-09;18!CL:0000789;4.07e-09;18!CL:0002419;4.07e-09;18!CL:0000624;1.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,3.17e-14,3;CL:0000842,3.17e-14,3;CL:0000084,4.74e-14,25;CL:0000827,4.74e-14,25;CL:0000791,3.70e-09,18;CL:0000789,3.70e-09,18;CL:0002420,3.70e-09,18;CL:0002419,3.70e-09,18;CL:0000790,3.70e-09,18;CL:0000838,1.01e-08,52;CL:0000542,1.52e-08,53;CL:0000051,1.52e-08,53;CL:0000624,9.26e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.07e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.78e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.94e-21;2!UBERON:0005058;4.94e-21;2!UBERON:0009113;4.94e-21;2!UBERON:0000178;6.66e-11;15!UBERON:0000179;6.66e-11;15!UBERON:0000463;6.66e-11;15!UBERON:0002390;6.42e-10;32!UBERON:0004177;5.60e-09;5!UBERON:0005057;5.60e-09;5!UBERON:0002193;6.92e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.44e-11,4;UBERON:0005058,5.44e-11,4;UBERON:0009113,5.44e-11,4;UBERON:0003295,5.44e-11,4;UBERON:0005562,5.44e-11,4;UBERON:0000178,7.30e-11,15;UBERON:0000179,7.30e-11,15;UBERON:0000463,7.30e-11,15;UBERON:0003351,1.29e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.458480434487708,0.492603536699674,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,3.53709686474248,2.67281948699362,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0.276350017785848,0.869409257205157,1.92772532110679,1.87278579662799,3.1360657141493,0.226618685395132,0.383220493601921,0.68725489096526,0.506039384039006,0.95569624297229,0,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0,0.80642697289893,1.33720097891754,1.88271725047639,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.788123040807709,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,3.45142721309787,1.06727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.732555718546747,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.822724546172388,0,0.540031437238115,2.37937552888281,0.106824071127473,0,0,0.185803175125719,0,1.28055318027145,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,4.08773192782946,0,0,0,0.392125068635479,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0.371995018166751,0.462175628631418,0.865253124247578,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,3.29403440163631,1.67601728598816,0.112131862580613,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,2.01273793591026,0 | |||
|short_description=p13@TCF7 | |||
}} |
Revision as of 13:11, 13 September 2013
Short description: | p13@TCF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_TCF7_5end |
Coexpression cluster: | C1525_Hodgkin_chronic_CD4_thymus_Whole_blood_acute |
Association with transcript: | 0bp_to_ENST00000517855_5end |
EntrezGene: | TCF7 |
HGNC: | 11639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 3.17e-14 | 3 |
mononuclear cell | 3.17e-14 | 3 |
T cell | 4.74e-14 | 25 |
pro-T cell | 4.74e-14 | 25 |
mature alpha-beta T cell | 3.70e-09 | 18 |
alpha-beta T cell | 3.70e-09 | 18 |
immature T cell | 3.70e-09 | 18 |
mature T cell | 3.70e-09 | 18 |
immature alpha-beta T cell | 3.70e-09 | 18 |
lymphoid lineage restricted progenitor cell | 1.01e-08 | 52 |
lymphocyte | 1.52e-08 | 53 |
common lymphoid progenitor | 1.52e-08 | 53 |
CD4-positive, alpha-beta T cell | 9.26e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.44e-11 | 4 |
hemolymphoid system gland | 5.44e-11 | 4 |
thymic region | 5.44e-11 | 4 |
pharyngeal gland | 5.44e-11 | 4 |
thymus primordium | 5.44e-11 | 4 |
blood | 7.30e-11 | 15 |
haemolymphatic fluid | 7.30e-11 | 15 |
organism substance | 7.30e-11 | 15 |
pharyngeal epithelium | 1.29e-07 | 6 |
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