FFCP PHASE1:Hg19::chr5:132070040..132070052,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11127|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=6319|TSSclassifier=S|UniProt=Q9Y496,Q2UVF2|association_with_transcript=118bp_to_AB463090,AF041853,AM177178,CU692264_5end|coexpression_cluster_id=C16|description=CAGE_peak_4_at_KIF3A_5end|id=chr5:132070040..132070052,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.35e-14!82;UBERON:0005743!2.13e-13!86;UBERON:0000073!2.16e-13!94;UBERON:0001016!2.16e-13!94;UBERON:0001049!9.20e-13!57;UBERON:0005068!9.20e-13!57;UBERON:0006241!9.20e-13!57;UBERON:0007135!9.20e-13!57;UBERON:0000955!2.22e-12!69;UBERON:0006238!2.22e-12!69;UBERON:0002020!2.20e-11!34;UBERON:0003528!2.20e-11!34;UBERON:0002619!4.95e-10!22;UBERON:0001893!6.17e-10!34;UBERON:0002616!6.67e-10!59;UBERON:0001869!1.13e-09!32;UBERON:0000956!1.26e-09!25;UBERON:0000203!1.26e-09!25;UBERON:0002780!1.54e-09!41;UBERON:0001890!1.54e-09!41;UBERON:0006240!1.54e-09!41;UBERON:0002791!2.23e-09!33;UBERON:0003080!3.54e-09!42;UBERON:0002346!5.36e-09!90;UBERON:0001950!5.79e-08!20;UBERON:0000349!9.36e-08!5;UBERON:0003075!1.14e-07!86;UBERON:0007284!1.14e-07!86|ontology_enrichment_uberon_v019=UBERON:0003112;5.92e-26;1!UBERON:0011158;5.92e-26;1!UBERON:0003128;5.92e-26;1!UBERON:0001703;5.92e-26;1!UBERON:0002241;5.92e-26;1!UBERON:0002021;9.92e-21;5!UBERON:0002771;6.43e-14;2!UBERON:0001950;2.34e-11;20!UBERON:0002619;1.99e-10;22!UBERON:0002114;1.41e-09;2!UBERON:0000956;2.67e-09;25!UBERON:0000203;2.67e-09;25!UBERON:0002791;2.35e-07;32!UBERON:0001869;2.35e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0003112,9.79e-26,1;UBERON:0011158,9.79e-26,1;UBERON:0003128,9.79e-26,1;UBERON:0001703,9.79e-26,1;UBERON:0002241,9.79e-26,1;UBERON:0004761,9.79e-26,1;UBERON:0009617,9.79e-26,1;UBERON:0002021,7.35e-21,5;UBERON:0002771,6.43e-14,2;UBERON:0005253,1.37e-13,2;UBERON:0001950,2.11e-11,20;UBERON:0002619,1.81e-10,22;UBERON:0002114,1.54e-09,2;UBERON:0000956,2.45e-09,25;UBERON:0000203,2.45e-09,25;UBERON:0002791,1.73e-07,32;UBERON:0001869,1.73e-07,32;UBERON:0003528,4.30e-07,34;UBERON:0002020,4.30e-07,34;UBERON:0001893,4.30e-07,34|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.64341568457443,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0.329607748453519,0.211125408127993,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0.552896299656123,0.591095237907095,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.451961481561065,0,0,0.443175571691151,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0.42976544141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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6319 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y496,Q2UVF2 | |||
|association_with_transcript=118bp_to_AB463090,AF041853,AM177178,CU692264_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_4_at_KIF3A_5end | |||
|id=chr5:132070040..132070052,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.35e-14!82;UBERON:0005743!2.13e-13!86;UBERON:0000073!2.16e-13!94;UBERON:0001016!2.16e-13!94;UBERON:0001049!9.20e-13!57;UBERON:0005068!9.20e-13!57;UBERON:0006241!9.20e-13!57;UBERON:0007135!9.20e-13!57;UBERON:0000955!2.22e-12!69;UBERON:0006238!2.22e-12!69;UBERON:0002020!2.20e-11!34;UBERON:0003528!2.20e-11!34;UBERON:0002619!4.95e-10!22;UBERON:0001893!6.17e-10!34;UBERON:0002616!6.67e-10!59;UBERON:0001869!1.13e-09!32;UBERON:0000956!1.26e-09!25;UBERON:0000203!1.26e-09!25;UBERON:0002780!1.54e-09!41;UBERON:0001890!1.54e-09!41;UBERON:0006240!1.54e-09!41;UBERON:0002791!2.23e-09!33;UBERON:0003080!3.54e-09!42;UBERON:0002346!5.36e-09!90;UBERON:0001950!5.79e-08!20;UBERON:0000349!9.36e-08!5;UBERON:0003075!1.14e-07!86;UBERON:0007284!1.14e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;5.92e-26;1!UBERON:0011158;5.92e-26;1!UBERON:0003128;5.92e-26;1!UBERON:0001703;5.92e-26;1!UBERON:0002241;5.92e-26;1!UBERON:0002021;9.92e-21;5!UBERON:0002771;6.43e-14;2!UBERON:0001950;2.34e-11;20!UBERON:0002619;1.99e-10;22!UBERON:0002114;1.41e-09;2!UBERON:0000956;2.67e-09;25!UBERON:0000203;2.67e-09;25!UBERON:0002791;2.35e-07;32!UBERON:0001869;2.35e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,9.79e-26,1;UBERON:0011158,9.79e-26,1;UBERON:0003128,9.79e-26,1;UBERON:0001703,9.79e-26,1;UBERON:0002241,9.79e-26,1;UBERON:0004761,9.79e-26,1;UBERON:0009617,9.79e-26,1;UBERON:0002021,7.35e-21,5;UBERON:0002771,6.43e-14,2;UBERON:0005253,1.37e-13,2;UBERON:0001950,2.11e-11,20;UBERON:0002619,1.81e-10,22;UBERON:0002114,1.54e-09,2;UBERON:0000956,2.45e-09,25;UBERON:0000203,2.45e-09,25;UBERON:0002791,1.73e-07,32;UBERON:0001869,1.73e-07,32;UBERON:0003528,4.30e-07,34;UBERON:0002020,4.30e-07,34;UBERON:0001893,4.30e-07,34 | |||
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|short_description=p4@KIF3A | |||
}} |
Revision as of 13:07, 13 September 2013
Short description: | p4@KIF3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_KIF3A_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 118bp_to_AB463090, AF041853, AM177178, CU692264_5end |
EntrezGene: | KIF3A |
HGNC: | 6319 |
UniProt: | Q9Y496Q2UVF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
olfactory region | 9.79e-26 | 1 |
primary subdivision of skull | 9.79e-26 | 1 |
cranium | 9.79e-26 | 1 |
neurocranium | 9.79e-26 | 1 |
chondrocranium | 9.79e-26 | 1 |
cartilaginous neurocranium | 9.79e-26 | 1 |
head paraxial mesoderm | 9.79e-26 | 1 |
occipital lobe | 7.35e-21 | 5 |
middle temporal gyrus | 6.43e-14 | 2 |
head mesenchyme | 1.37e-13 | 2 |
neocortex | 2.11e-11 | 20 |
regional part of cerebral cortex | 1.81e-10 | 22 |
duodenum | 1.54e-09 | 2 |
cerebral cortex | 2.45e-09 | 25 |
pallium | 2.45e-09 | 25 |
regional part of telencephalon | 1.73e-07 | 32 |
cerebral hemisphere | 1.73e-07 | 32 |
brain grey matter | 4.30e-07 | 34 |
gray matter | 4.30e-07 | 34 |
telencephalon | 4.30e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.