FFCP PHASE1:Mm9::chr16:65562931..65563014,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68942|HGNC=|MCL_coexpression_id=12|UniProt=Q8BJF9|association_with_transcript=0bp_to_ENSMUST00000004965,NM_026879,uc007zqj.1_5end|description=CAGE_peak_1_at_Chmp2b_5end|id=chr16:65562931..65563014,-|ontology_enrichment_celltype=CL:0000066!6.59e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,6.59e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.78e-07!15;UBERON:0000160!6.26e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-12,31;UBERON:0005409,1.51e-09,47;UBERON:0000344,4.78e-07,15|phase1_expression=72.8677254326813,324.198153696966,382.19936108721,249.835438539442,304.043708077433,161.66773885115,134.093655701832,30.9895976259783,21.11830832275,18.2570330531155,17.4642327590015,18.507140886918,27.5633175189241,27.9745287740792,16.3223783289675,15.3881203216268,18.88817070946,39.2750395871006,36.3353249055208,41.1657962244089,77.3043507473224,43.290854723586,27.6871776487272,153.59272588167,153.933627596071,330.183379366137,287.318251438103,238.957597048651,283.51494182891,224.558845616098,213.304751250403,10.1604907753541,6.76571266343027,0,48.8159237379654,49.7041589621892,47.1631212966073,76.5912884248541,70.320181007142,63.3463730208296,72.3524730278148,54.6436387966757,67.9714494243615,58.7938139945946,50.9925964034158,36.892897184498,32.8604364626176,24.8548678273709,36.4679063339223,36.1639612278167,39.4761708983522,35.9381410912429,46.9791296961662,23.9369506863744,31.5928171193916,63.5430807008789,65.6161577459753,84.5702231335005,63.7296851707733,68.2398363260922,61.4816461400994,26.0910289693232,40.0182658250013,31.9464399634897,36.5880554149781,32.6820852875206,20.9720077362883,33.0427742576537,24.1596796678753,22.5459917013923,26.9215950529769,67.4136323192976,68.6901162359518,26.70299422886,18.0189485514284,19.3035945188104,56.1590993096882,54.1394313481196,57.9096630376038,51.4356522147756,49.2203522580964,56.7795573906868,58.0700637922872,47.8348218526928,53.4793867218835,90.1563471549423,83.4298049482743,95.6229157083792,51.6452638532315,52.4466627141092,121.743085254705,48.1837371109576,110.155356060656,35.6204106480959,37.6870322119648,42.1145273871495,53.6497684903292,66.2973954828645,71.181365261186,65.3678212844129,67.7456849125833,74.4293569003043,132.498724647456,99.5493384414664,122.100947130325,119.585856504247,103.126986783016,77.1883026900845,35.2155521760154,39.0402825740489,35.0440360067594,36.2313919191448,38.9740190362739,42.6545072763922,44.5661200044321,47.5019715226173,111.979320383671,52.4895665619279,23.8844849026466,42.8682152360634,34.0095938429006,45.0933985415757,95.0597982212423,50.3582970859861,39.1665341741161,161.959773002247,60.6264529999957,62.3898840233144,59.8500769514135,38.046822408825,44.8350590762254,56.2931497465633,60.8385120672968,74.1574826257959,54.0248915854856,63.9230576486965,84.7303507234631,46.777020949395,45.9955420349288,64.1847660453746,45.1517937080582,48.2794419310293,48.7968371772496,53.0480958781717,50.9593378643446,45.9928255822611,44.6957226149907,56.9147415625834,33.1974709116577,45.7636714006123,54.5448484908241,54.141345909611,75.350804540137,79.0532418005318,104.948889568051,47.9672583032569,68.816892356697,61.2488018933022,61.379315869448,30.4474885627188,39.8694301967864,42.4946465047995,42.8507971409231,46.6331229241347,49.365476123961,50.9249339003393,47.216118646333,54.0623535159995,47.7223564749093,58.607784676237,70.2866578762569,60.8191947689382,61.9131325120763,70.3241634304348,49.8387178096982,67.0938072712934,257.726650727362,121.911711231894,43.5108031091877,54.3433812153426,58.6346949015525,74.6229041106367,100.514875817881,105.004545614133,143.307776586443,165.522449497631,127.426950861737,136.683096292271,122.437446710807,130.328814254862,167.506988652888,191.573904870701,52.1586727620975,43.6429318169164,37.1935527721165,52.5420425840911,56.6341262529467,71.4684004682346,70.0660831336771,72.3289725100051,64.526477142805,68.7322203044429,40.0211046567651,17.5187361001899,17.8868685553015,17.7641068784034,21.9088931099583,20.0177042594506,25.462585178142,28.4819176076303,45.884269177335,36.2421065408268,58.9449646762154,46.1454775108944,50.5501030445588,51.7786699791579,47.002122342741,36.6657076236159,57.6429953319807,42.8250590601296,34.7115399821515,42.2665263580218,47.6421204025659,49.7493584602193,61.8913466303636,78.4437264388351,69.0441931185117,75.0765297909347,70.4790077466093,70.4612253277673,64.2388132541132,71.7459330564297,85.9510318453852,73.9711729993445,47.2093702098275,65.3970088742216,54.9083017758249,66.927873044148,50.9837680121461,55.7960749121664,63.7326603220839,67.1554640190218,65.2732895130381,61.6539498717584,53.2488831056922,57.1814592193441,68.817819284732,71.8949410461827,68.3847855847486,69.7267256635321,44.7111268406046,55.5564683441836,79.9774970426058,55.759901564717,33.1862845849907,45.3999789609815,34.7672090509464,48.4715054972658,39.8657555389043,49.1896236710284,81.6633406411579,42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| ||
|EntrezGene=68942 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q8BJF9 | |||
|association_with_transcript=0bp_to_ENSMUST00000004965,NM_026879,uc007zqj.1_5end | |||
|description=CAGE_peak_1_at_Chmp2b_5end | |||
|id=chr16:65562931..65563014,- | |||
|ontology_enrichment_celltype=CL:0000066!6.59e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.59e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.78e-07!15;UBERON:0000160!6.26e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-12,31;UBERON:0005409,1.51e-09,47;UBERON:0000344,4.78e-07,15 | |||
|phase1_expression=72.8677254326813,324.198153696966,382.19936108721,249.835438539442,304.043708077433,161.66773885115,134.093655701832,30.9895976259783,21.11830832275,18.2570330531155,17.4642327590015,18.507140886918,27.5633175189241,27.9745287740792,16.3223783289675,15.3881203216268,18.88817070946,39.2750395871006,36.3353249055208,41.1657962244089,77.3043507473224,43.290854723586,27.6871776487272,153.59272588167,153.933627596071,330.183379366137,287.318251438103,238.957597048651,283.51494182891,224.558845616098,213.304751250403,10.1604907753541,6.76571266343027,0,48.8159237379654,49.7041589621892,47.1631212966073,76.5912884248541,70.320181007142,63.3463730208296,72.3524730278148,54.6436387966757,67.9714494243615,58.7938139945946,50.9925964034158,36.892897184498,32.8604364626176,24.8548678273709,36.4679063339223,36.1639612278167,39.4761708983522,35.9381410912429,46.9791296961662,23.9369506863744,31.5928171193916,63.5430807008789,65.6161577459753,84.5702231335005,63.7296851707733,68.2398363260922,61.4816461400994,26.0910289693232,40.0182658250013,31.9464399634897,36.5880554149781,32.6820852875206,20.9720077362883,33.0427742576537,24.1596796678753,22.5459917013923,26.9215950529769,67.4136323192976,68.6901162359518,26.70299422886,18.0189485514284,19.3035945188104,56.1590993096882,54.1394313481196,57.9096630376038,51.4356522147756,49.2203522580964,56.7795573906868,58.0700637922872,47.8348218526928,53.4793867218835,90.1563471549423,83.4298049482743,95.6229157083792,51.6452638532315,52.4466627141092,121.743085254705,48.1837371109576,110.155356060656,35.6204106480959,37.6870322119648,42.1145273871495,53.6497684903292,66.2973954828645,71.181365261186,65.3678212844129,67.7456849125833,74.4293569003043,132.498724647456,99.5493384414664,122.100947130325,119.585856504247,103.126986783016,77.1883026900845,35.2155521760154,39.0402825740489,35.0440360067594,36.2313919191448,38.9740190362739,42.6545072763922,44.5661200044321,47.5019715226173,111.979320383671,52.4895665619279,23.8844849026466,42.8682152360634,34.0095938429006,45.0933985415757,95.0597982212423,50.3582970859861,39.1665341741161,161.959773002247,60.6264529999957,62.3898840233144,59.8500769514135,38.046822408825,44.8350590762254,56.2931497465633,60.8385120672968,74.1574826257959,54.0248915854856,63.9230576486965,84.7303507234631,46.777020949395,45.9955420349288,64.1847660453746,45.1517937080582,48.2794419310293,48.7968371772496,53.0480958781717,50.9593378643446,45.9928255822611,44.6957226149907,56.9147415625834,33.1974709116577,45.7636714006123,54.5448484908241,54.141345909611,75.350804540137,79.0532418005318,104.948889568051,47.9672583032569,68.816892356697,61.2488018933022,61.379315869448,30.4474885627188,39.8694301967864,42.4946465047995,42.8507971409231,46.6331229241347,49.365476123961,50.9249339003393,47.216118646333,54.0623535159995,47.7223564749093,58.607784676237,70.2866578762569,60.8191947689382,61.9131325120763,70.3241634304348,49.8387178096982,67.0938072712934,257.726650727362,121.911711231894,43.5108031091877,54.3433812153426,58.6346949015525,74.6229041106367,100.514875817881,105.004545614133,143.307776586443,165.522449497631,127.426950861737,136.683096292271,122.437446710807,130.328814254862,167.506988652888,191.573904870701,52.1586727620975,43.6429318169164,37.1935527721165,52.5420425840911,56.6341262529467,71.4684004682346,70.0660831336771,72.3289725100051,64.526477142805,68.7322203044429,40.0211046567651,17.5187361001899,17.8868685553015,17.7641068784034,21.9088931099583,20.0177042594506,25.462585178142,28.4819176076303,45.884269177335,36.2421065408268,58.9449646762154,46.1454775108944,50.5501030445588,51.7786699791579,47.002122342741,36.6657076236159,57.6429953319807,42.8250590601296,34.7115399821515,42.2665263580218,47.6421204025659,49.7493584602193,61.8913466303636,78.4437264388351,69.0441931185117,75.0765297909347,70.4790077466093,70.4612253277673,64.2388132541132,71.7459330564297,85.9510318453852,73.9711729993445,47.2093702098275,65.3970088742216,54.9083017758249,66.927873044148,50.9837680121461,55.7960749121664,63.7326603220839,67.1554640190218,65.2732895130381,61.6539498717584,53.2488831056922,57.1814592193441,68.817819284732,71.8949410461827,68.3847855847486,69.7267256635321,44.7111268406046,55.5564683441836,79.9774970426058,55.759901564717,33.1862845849907,45.3999789609815,34.7672090509464,48.4715054972658,39.8657555389043,49.1896236710284,81.6633406411579,42.8969800783456,43.492680162936,47.0894769324366,44.2758156014995,40.2228618667929,80.0033073521402,49.1566786705477,42.170930913178,63.8724364394145,70.5814129896249,63.8560367015413,70.2624317971056,43.5384877233877,107.714314001243,73.2938965188818,41.9003956304428,98.7668655119465,106.566521619298,88.2981220948202,86.6643217462771,101.110794242958,157.10817094349,55.0713146971214,25.8015030004758,50.5647826509895,37.9648781107909,23.169320211577,25.4251263561107,25.394377225924,71.0509837374315,73.4745124699204,73.2459861163446,155.611310736464,33.0571113292286,45.9501995706678,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| |||
|short_description=p1@Chmp2b | |||
}} | |||
Revision as of 13:00, 13 September 2013
| Short description: | p1@Chmp2b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Chmp2b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:12 |
| Association with transcript: | 0bp_to_ENSMUST00000004965, NM_026879, uc007zqj.1_5end |
| EntrezGene: | Chmp2b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.59e-07 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.99e-12 | 31 |
| gastrointestinal system | 1.51e-09 | 47 |
| mucosa | 4.78e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
