FFCP PHASE1:Hg19::chr5:12723956..12723960,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:12723956..12723960,+|id=chr5:12723956..12723960,+|ontology_enrichment_celltype=CL:0000039!1.05e-12!7;CL:0000586!1.05e-12!7;CL:0002322!2.90e-08!5|ontology_enrichment_celltype_v019=CL:0000039;9.33e-23;7!CL:0000586;9.33e-23;7!CL:0000319;1.11e-07;1|ontology_enrichment_celltype_v019_2=CL:0000039,1.29e-22,7;CL:0000586,1.29e-22,7;CL:0000319,6.10e-08,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!3.71e-13!143;DOID:162!9.51e-12!235;DOID:14566!2.99e-11!239;DOID:305!2.42e-10!106;DOID:3095!1.45e-07!22;DOID:2994!1.45e-07!22|ontology_enrichment_disease_v019=DOID:3095;3.98e-10;22!DOID:2994;3.98e-10;22!DOID:1325;7.11e-09;7!DOID:3904;7.11e-09;7!DOID:1799;2.79e-08;1!DOID:10165;2.79e-08;1!DOID:1798;2.79e-08;1!DOID:0060085;4.65e-08;1!DOID:3165;4.65e-08;1!DOID:0060121;4.65e-08;1!DOID:2438;4.65e-08;1!DOID:4418;4.65e-08;1!DOID:1036;5.36e-08;8!DOID:0050619;1.11e-07;1!DOID:3030;1.11e-07;1!DOID:1357;1.11e-07;1!DOID:5409;1.87e-07;4|ontology_enrichment_disease_v019_2=DOID:0050687,3.50e-14,143;DOID:162,7.38e-14,235;DOID:14566,1.81e-13,239;DOID:305,9.36e-11,106;DOID:3095,4.44e-10,22;DOID:2994,4.44e-10,22;DOID:1325,8.61e-09,7;DOID:3904,8.61e-09,7;DOID:1799,2.89e-08,1;DOID:10165,2.89e-08,1;DOID:1798,2.89e-08,1;DOID:0060085,4.99e-08,1;DOID:3165,4.99e-08,1;DOID:0060121,4.99e-08,1;DOID:2438,4.99e-08,1;DOID:4418,4.99e-08,1;DOID:1036,6.05e-08,8;DOID:3030,6.10e-08,1;DOID:0050619,1.11e-07,1;DOID:1357,1.11e-07,1;DOID:5409,2.42e-07,4|ontology_enrichment_uberon=UBERON:0000473!3.98e-07!8|ontology_enrichment_uberon_v019=UBERON:0001282;4.65e-08;1!UBERON:0009842;4.65e-08;1!UBERON:0003704;4.65e-08;1!UBERON:0001171;4.65e-08;1!UBERON:0001172;4.65e-08;1!UBERON:0007195;1.11e-07;1!UBERON:0001764;1.11e-07;1!UBERON:0001825;1.11e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.35e-08,1;UBERON:0009842,4.35e-08,1;UBERON:0003704,4.35e-08,1;UBERON:0001171,4.35e-08,1;UBERON:0001172,4.35e-08,1;UBERON:0001764,1.11e-07,1;UBERON:0001825,1.11e-07,1;UBERON:0007195,1.35e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,1.04574548582567,0.932949495138334,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69904730449319,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,1.82299432759663,0,0,0,0,1.41832609060762,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,2.27884111694002,2.07507513949254,1.43612231055635,1.73835795075213,0,0.183195186803725,0.533034776018635,0,0,0,3.15833924864053,0.784250137270958,2.01385904371011,1.13852239634511,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,2.18586072873289,0,0.586654148204409,4.56905275433742,0,0.599428828746391,0,0,1.02956998717179,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.550157746388935,0.83088067605837,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,2.94611437952327,0,0,0,0.13223260174269,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,2.62216589314576,0,5.23813388962845,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0.098150233615243,0,0.647428837187895,0,0,0,4.91272873270422,0,0.118920090777569,1.01651473835064,0,2.2644426535001,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0.462175628631418,0,0,0.437062287854782,5.70143254551466,0,1.06886962106224,0.459474497674225,1.0028301571695,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,1.70763753404345,0,0,0,0,0,0,0,0|short_description=p@chr5:12723956..12723960,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:12723956..12723960,+ | |||
|id=chr5:12723956..12723960,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.05e-12!7;CL:0000586!1.05e-12!7;CL:0002322!2.90e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.33e-23;7!CL:0000586;9.33e-23;7!CL:0000319;1.11e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.29e-22,7;CL:0000586,1.29e-22,7;CL:0000319,6.10e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.71e-13!143;DOID:162!9.51e-12!235;DOID:14566!2.99e-11!239;DOID:305!2.42e-10!106;DOID:3095!1.45e-07!22;DOID:2994!1.45e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.98e-10;22!DOID:2994;3.98e-10;22!DOID:1325;7.11e-09;7!DOID:3904;7.11e-09;7!DOID:1799;2.79e-08;1!DOID:10165;2.79e-08;1!DOID:1798;2.79e-08;1!DOID:0060085;4.65e-08;1!DOID:3165;4.65e-08;1!DOID:0060121;4.65e-08;1!DOID:2438;4.65e-08;1!DOID:4418;4.65e-08;1!DOID:1036;5.36e-08;8!DOID:0050619;1.11e-07;1!DOID:3030;1.11e-07;1!DOID:1357;1.11e-07;1!DOID:5409;1.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.50e-14,143;DOID:162,7.38e-14,235;DOID:14566,1.81e-13,239;DOID:305,9.36e-11,106;DOID:3095,4.44e-10,22;DOID:2994,4.44e-10,22;DOID:1325,8.61e-09,7;DOID:3904,8.61e-09,7;DOID:1799,2.89e-08,1;DOID:10165,2.89e-08,1;DOID:1798,2.89e-08,1;DOID:0060085,4.99e-08,1;DOID:3165,4.99e-08,1;DOID:0060121,4.99e-08,1;DOID:2438,4.99e-08,1;DOID:4418,4.99e-08,1;DOID:1036,6.05e-08,8;DOID:3030,6.10e-08,1;DOID:0050619,1.11e-07,1;DOID:1357,1.11e-07,1;DOID:5409,2.42e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.98e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;4.65e-08;1!UBERON:0009842;4.65e-08;1!UBERON:0003704;4.65e-08;1!UBERON:0001171;4.65e-08;1!UBERON:0001172;4.65e-08;1!UBERON:0007195;1.11e-07;1!UBERON:0001764;1.11e-07;1!UBERON:0001825;1.11e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.35e-08,1;UBERON:0009842,4.35e-08,1;UBERON:0003704,4.35e-08,1;UBERON:0001171,4.35e-08,1;UBERON:0001172,4.35e-08,1;UBERON:0001764,1.11e-07,1;UBERON:0001825,1.11e-07,1;UBERON:0007195,1.35e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,1.04574548582567,0.932949495138334,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69904730449319,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,1.82299432759663,0,0,0,0,1.41832609060762,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,2.27884111694002,2.07507513949254,1.43612231055635,1.73835795075213,0,0.183195186803725,0.533034776018635,0,0,0,3.15833924864053,0.784250137270958,2.01385904371011,1.13852239634511,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,2.18586072873289,0,0.586654148204409,4.56905275433742,0,0.599428828746391,0,0,1.02956998717179,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.550157746388935,0.83088067605837,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,2.94611437952327,0,0,0,0.13223260174269,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,2.62216589314576,0,5.23813388962845,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782988022584546,0.098150233615243,0,0.647428837187895,0,0,0,4.91272873270422,0,0.118920090777569,1.01651473835064,0,2.2644426535001,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0.462175628631418,0,0,0.437062287854782,5.70143254551466,0,1.06886962106224,0.459474497674225,1.0028301571695,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,1.70763753404345,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:12723956..12723960,+ | |||
}} |
Revision as of 12:59, 13 September 2013
Short description: | p@chr5:12723956..12723960, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:12723956..12723960, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.29e-22 | 7 |
germ cell | 1.29e-22 | 7 |
mucus secreting cell | 6.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.35e-08 | 1 |
acinus | 4.35e-08 | 1 |
intrahepatic bile duct | 4.35e-08 | 1 |
portal lobule | 4.35e-08 | 1 |
hepatic acinus | 4.35e-08 | 1 |
maxillary sinus | 1.11e-07 | 1 |
paranasal sinus | 1.11e-07 | 1 |
stroma of bone marrow | 1.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.50e-14 | 143 |
cancer | 7.38e-14 | 235 |
disease of cellular proliferation | 1.81e-13 | 239 |
carcinoma | 9.36e-11 | 106 |
germ cell and embryonal cancer | 4.44e-10 | 22 |
germ cell cancer | 4.44e-10 | 22 |
bronchus cancer | 8.61e-09 | 7 |
bronchogenic carcinoma | 8.61e-09 | 7 |
islet cell tumor | 2.89e-08 | 1 |
endocrine pancreas cancer | 2.89e-08 | 1 |
pancreatic endocrine carcinoma | 2.89e-08 | 1 |
organ system benign neoplasm | 4.99e-08 | 1 |
skin benign neoplasm | 4.99e-08 | 1 |
integumentary system benign neoplasm | 4.99e-08 | 1 |
dermis tumor | 4.99e-08 | 1 |
cutaneous fibrous histiocytoma | 4.99e-08 | 1 |
chronic leukemia | 6.05e-08 | 8 |
mucinous adenocarcinoma | 6.10e-08 | 1 |
paranasal sinus cancer | 1.11e-07 | 1 |
maxillary sinus cancer | 1.11e-07 | 1 |
lung small cell carcinoma | 2.42e-07 | 4 |
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